Gene
| Gene Model ID | habu1_s1233_g04263 |
|---|---|
| Locus | habu1_scaffold1233 : 671118 ... 690214 : + |
| To GenomeBrowser | habu1_scaffold1233:671118..690214 |
| Genes list of scaffold | habu1_scaffold1233 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| x-ray repair cross-complementing protein 6 isoform x1 | GO:0000723 GO:0000781 GO:0003684 GO:0003691 GO:0004003 GO:0005657 GO:0005667 GO:0005737 GO:0006303 GO:0008022 GO:0010212 GO:0016020 GO:0032508 GO:0033151 GO:0043564 GO:0044212 GO:0044822 GO:0045892 GO:0045944 GO:0050769 GO:0051575 GO:0070419 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1233_g04263.t2 | 1 | 1 | Ku_N | 37 | 254 | 0.0 | 209.0 | 0.0 | 0.0 | 209.0 |
| habu1_s1233_g04263.t2 | 1 | 1 | Ku | 261 | 461 | 0.0 | 190.6 | 0.0 | 0.0 | 189.6 |
| habu1_s1233_g04263.t2 | 1 | 1 | Ku_C | 468 | 559 | 7.8e-24 | 84.0 | 1.0e-26 | 2.5e-23 | 82.4 |
| habu1_s1233_g04263.t2 | 1 | 1 | SAP | 574 | 602 | 1.2e-06 | 27.8 | 1.1e-09 | 2.8e-06 | 26.7 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 15.2 |
| Venom grand-1 | 6.4 |
| Pit, infrared sensing | 16.3 |
| Nose | 19.0 |
| Brain-1 | 6.1 |
| Eye | 10.2 |
| fetal fibroblast | 36.6 |
| venom gland-2 | 11.1 |
| Brain-2 | 7.2 |
| Spleen | 10.8 |
| Lung | 13.5 |
| Liver | 10.9 |
| Kidney | 16.5 |
| Pancreas | 7.6 |
| Small intestine | 11.0 |
| Large intestine | 12.8 |
| Stomach | 10.2 |
| heart | 30.7 |
| ovary | 33.7 |
| cheek muscle | 24.0 |
Transcript
| Transcript ID | habu1_s1233_g04263.t1 |
|---|---|
| Definition | - |
>habu1_s1233_g04263.t1 ccccataagttaacacaggggaaccatgtcagactgggtatcttactacagaaatgagggagaggaggaggaggaggaag aagaagcagcagctgaaaacgttggagtatataaatatggaggtcgagacactttgctcttcttagtggatggttcaaga accatgtttgagtcttttgatgatagtaatttcacaccttttgatatgacaattcagtgcattcagaatgtatacaaaaa caaaatcatcagccatgagagggaccttgttggtgttgtgttttatggaacagagcagcataaaaattcagtgaattgta aacacatatatgttctccatgatttgcaaaatccaggagcaaaacgggtattagagctggccagctatgaaggagaacag ggaaaagctctcttccaaaagtcctttggccatagtgataactattcattaggagaggcactctgggtttgttctaatct ctttagtgttgtccatttcaagatgagccacaagagaatcatgctgttcaccaacgaagatgaccctcatggtcaagata gtactagaaccaaatttgctaggactaaagctgctgacctacgagaaacaggaatttaccttgacttaatgaacctaaag aagcctggagggtttgatatttccttattctacagagacatcattaatacagcagacgatgaggacttaggaatccagtt tgaagagtcttgcaaattggaggatcttatgaagaaagtacgagcaaaagaaacaaggaagcgagctttaagtcggctga atttatatttgggaaaagatgtaattcttactgttggcattttcaacttagtccagaaggctgtcaagcagcctccagtg aaactttatagagaaactaatgagccactgaaaacaaaaacacgaacctttaatcgagagacaggtagtttgcttcttcc cagtgacaccaagaggactcaggtttatgggaatcgtcagattgtgctagagaaagaagagacagaagaaataaaaagat ttgattcaccaggcttgtatctgattggttttaaatccttggtaatgctgaaaccatatcactatatcaggcctgcacag tttatctatcctgatgagctcttaatgaatggaagtactactctgtttaatgctttgttaacaaagtgtttggagaaagg agtgatggccatatgtagatacataccacgtcaaaacaaccctcccaggtttatagctctggtcccacaagaagaagaac tggatgagcagaatgtacagatagtccctgcaggttttcatctcatttttctaccttatgctgatgacaaacggcatatt gactttactgagaaggtatcagctaatcaacaacaagtgaacaaaatgaaggaaataatccagaagcttcgattcaaata caaaagtgagagctttgaaaatccagtacttcaacaacattatatgaatttggaagcactggcactagatttgatggagc ctgaaaaagctgaggatctgacagcgcccaagactgagctaatggatggccgactgggtagccttgcagaggagtttaaa caacttgtttatccaccaggctatgatcctgatgggaaaactataaaacggaaacaagcaggtagtggtaatgaacaacc agaaaagaaagcaaggatagaactctctgaagaggagctgaggagtcatgttgatagaggcactttgggtaaacttactg tgccagttctaaaggatatatgcagagtttataagctaacaggtggtggaaagaagcaagaacttttagatgtgataact gcacatttcaataagcattgagtttacactcccaactgtttcaaacattttaatgttgaaaatctcctaaatgttgagat tttgacaagaaaaaatgggaatatgttttcataggcatttgataaaagggagtgggaatcagggttttctctttgtgaaa tttatagtaaaagcctctctccacttctggttctagatttgattgtgcaactttcatcttgtctttaataaatgagcttg gtttggctgtcagc |
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| Transcript ID | habu1_s1233_g04263.t2 |
| Definition | - |
>habu1_s1233_g04263.t2 ggctttttatcggcgttaacacaggggaaccatgtcagactgggtatcttactacagaaatgagggagaggaggaggagg aggaagaagaagcagcagctgaaaacgttggagtatataaatatggaggtcgagacactttgctcttcttagtggatggt tcaagaaccatgtttgagtcttttgatgatagtaatttcacaccttttgatatgacaattcagtgcattcagaatgtata caaaaacaaaatcatcagccatgagagggaccttgttggtgttgtgttttatggaacagagcagcataaaaattcagtga attgtaaacacatatatgttctccatgatttgcaaaatccaggagcaaaacgggtattagagctggccagctatgaagga gaacagggaaaagctctcttccaaaagtcctttggccatagtgataactattcattaggagaggcactctgggtttgttc taatctctttagtgttgtccatttcaagatgagccacaagagaatcatgctgttcaccaacgaagatgaccctcatggtc aagatagtactagaaccaaatttgctaggactaaagctgctgacctacgagaaacaggaatttaccttgacttaatgaac ctaaagaagcctggagggtttgatatttccttattctacagagacatcattaatacagcagacgatgaggacttaggaat ccagtttgaagagtcttgcaaattggaggatcttatgaagaaagtacgagcaaaagaaacaaggaagcgagctttaagtc ggctgaatttatatttgggaaaagatgtaattcttactgttggcattttcaacttagtccagaaggctgtcaagcagcct ccagtgaaactttatagagaaactaatgagccactgaaaacaaaaacacgaacctttaatcgagagacaggtagtttgct tcttcccagtgacaccaagaggactcaggtttatgggaatcgtcagattgtgctagagaaagaagagacagaagaaataa aaagatttgattcaccaggcttgtatctgattggttttaaatccttggtaatgctgaaaccatatcactatatcaggcct gcacagtttatctatcctgatgagctcttaatgaatggaagtactactctgtttaatgctttgttaacaaagtgtttgga gaaaggagtgatggccatatgtagatacataccacgtcaaaacaaccctcccaggtttatagctctggtcccacaagaag aagaactggatgagcagaatgtacagatagtccctgcaggttttcatctcatttttctaccttatgctgatgacaaacgg catattgactttactgagaaggtatcagctaatcaacaacaagtgaacaaaatgaaggaaataatccagaagcttcgatt caaatacaaaagtgagagctttgaaaatccagtacttcaacaacattatatgaatttggaagcactggcactagatttga tggagcctgaaaaagctgaggatctgacagcgcccaagactgagctaatggatggccgactgggtagccttgcagaggag tttaaacaacttgtttatccaccaggctatgatcctgatgggaaaactataaaacggaaacaagcaggtagtggtaatga acaaccagaaaagaaagcaaggatagaactctctgaagaggagctgaggagtcatgttgatagaggcactttgggtaaac ttactgtgccagttctaaaggatatatgcagagtttataagctaacaggtggtggaaagaagcaagaacttttagatgtg ataactgcacatttcaataagcattgagtttacactcccaactgtttcaaacattttaatgttgaaaatctcctaaatgt tgagattttgacaagaaaaaatgggaatatgttttcataggcatttgataaaagggagtgggaatcagggttttctcttt gtgaaatttatagtaaaagcctctctccacttctggttctagatttgattgtgcaactttcatcttgtctttaataaatg agcttggtttggctgtcagc |
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Protein
| Protein ID | habu1_s1233_g04263.t1 |
|---|---|
| Definition | - |
>habu1_s1233_g04263.t1 MSDWVSYYRNEGEEEEEEEEAAAENVGVYKYGGRDTLLFLVDGSRTMFESFDDSNFTPFDMTIQCIQNVYKNKIISHERD LVGVVFYGTEQHKNSVNCKHIYVLHDLQNPGAKRVLELASYEGEQGKALFQKSFGHSDNYSLGEALWVCSNLFSVVHFKM SHKRIMLFTNEDDPHGQDSTRTKFARTKAADLRETGIYLDLMNLKKPGGFDISLFYRDIINTADDEDLGIQFEESCKLED LMKKVRAKETRKRALSRLNLYLGKDVILTVGIFNLVQKAVKQPPVKLYRETNEPLKTKTRTFNRETGSLLLPSDTKRTQV YGNRQIVLEKEETEEIKRFDSPGLYLIGFKSLVMLKPYHYIRPAQFIYPDELLMNGSTTLFNALLTKCLEKGVMAICRYI PRQNNPPRFIALVPQEEELDEQNVQIVPAGFHLIFLPYADDKRHIDFTEKVSANQQQVNKMKEIIQKLRFKYKSESFENP VLQQHYMNLEALALDLMEPEKAEDLTAPKTELMDGRLGSLAEEFKQLVYPPGYDPDGKTIKRKQAGSGNEQPEKKARIEL SEEELRSHVDRGTLGKLTVPVLKDICRVYKLTGGGKKQELLDVITAHFNKH |
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| Protein ID | habu1_s1233_g04263.t2 |
| Definition | - |
>habu1_s1233_g04263.t2 MSDWVSYYRNEGEEEEEEEEAAAENVGVYKYGGRDTLLFLVDGSRTMFESFDDSNFTPFDMTIQCIQNVYKNKIISHERD LVGVVFYGTEQHKNSVNCKHIYVLHDLQNPGAKRVLELASYEGEQGKALFQKSFGHSDNYSLGEALWVCSNLFSVVHFKM SHKRIMLFTNEDDPHGQDSTRTKFARTKAADLRETGIYLDLMNLKKPGGFDISLFYRDIINTADDEDLGIQFEESCKLED LMKKVRAKETRKRALSRLNLYLGKDVILTVGIFNLVQKAVKQPPVKLYRETNEPLKTKTRTFNRETGSLLLPSDTKRTQV YGNRQIVLEKEETEEIKRFDSPGLYLIGFKSLVMLKPYHYIRPAQFIYPDELLMNGSTTLFNALLTKCLEKGVMAICRYI PRQNNPPRFIALVPQEEELDEQNVQIVPAGFHLIFLPYADDKRHIDFTEKVSANQQQVNKMKEIIQKLRFKYKSESFENP VLQQHYMNLEALALDLMEPEKAEDLTAPKTELMDGRLGSLAEEFKQLVYPPGYDPDGKTIKRKQAGSGNEQPEKKARIEL SEEELRSHVDRGTLGKLTVPVLKDICRVYKLTGGGKKQELLDVITAHFNKH |
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