Gene
| Gene Model ID | habu1_s1233_g04264 |
|---|---|
| Locus | habu1_scaffold1233 : 691966 ... 695967 : - |
| To GenomeBrowser | habu1_scaffold1233:691966..695967 |
| Genes list of scaffold | habu1_scaffold1233 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| nhp2-like protein 1 | GO:0005730 GO:0030515 GO:0030529 GO:0042254 GO:0044822 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1233_g04264.t1 | 1 | 1 | Ribosomal_L7Ae | 23 | 111 | 9.5e-26 | 89.1 | 2.4e-29 | 1.2e-25 | 88.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s1233_g04264.t1 | gi|530626253|ref|XP_005302662.1| | PREDICTED: NHP2-like protein 1 [Chrysemys picta bellii] | 0.0 |
| habu1_s1233_g04264.t1 | gi|663242365|ref|XP_008495860.1| | PREDICTED: NHP2-like protein 1 [Calypte anna] | 0.0 |
| habu1_s1233_g04264.t1 | gi|525313995|ref|NP_001266183.1| | NHP2-like protein 1 [Taeniopygia guttata] | 0.0 |
| habu1_s1233_g04264.t1 | gi|591352872|ref|XP_007053385.1| | PREDICTED: NHP2-like protein 1 [Chelonia mydas] | 0.0 |
| habu1_s1233_g04264.t1 | gi|696969030|ref|XP_009554958.1| | PREDICTED: NHP2-like protein 1 [Cuculus canorus] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 16.4 |
| Venom grand-1 | 71.0 |
| Pit, infrared sensing | 18.6 |
| Nose | 19.1 |
| Brain-1 | 8.5 |
| Eye | 15.3 |
| fetal fibroblast | 71.7 |
| venom gland-2 | 91.8 |
| Brain-2 | 8.2 |
| Spleen | 28.1 |
| Lung | 17.6 |
| Liver | 36.7 |
| Kidney | 51.4 |
| Pancreas | 100.4 |
| Small intestine | 24.4 |
| Large intestine | 16.3 |
| Stomach | 21.9 |
| heart | 25.1 |
| ovary | 103.1 |
| cheek muscle | 29.4 |
Transcript
| Transcript ID | habu1_s1233_g04264.t1 |
|---|---|
| Definition | - |
>habu1_s1233_g04264.t1 tccgggtgaaacttctacttagcagaaatgactgaggcagaagtaaatccaaaagcttatcctcttgctgatgctcaact caccaagacactactggatcttgtacagcagtcttgtaactacaaacagttacgcaaaggagccaacgaagccactaaaa ctttgaatagaggaattgcagaattcattgtgatggctgcagatgctgaacctcttgaaattatccttcatctcccacta ctttgtgaagacaagaatgtgccctatgtgtttgtgcgttccaagcaagccttaggacgggcatgtggtgtttctcggcc tgttattgcctgttccattactatcaaagaaggctcacaactcaagcctcaaattaattctgtccaacaatctattgaaa gactattggtctaaatctgacagaagtaactcaaaaaaccaagactgtatatgcatattttgtttaacagctattgcttt acaatatagaaaagaacacaacaaagacatttagtatgatataaagttttcagatgcataaatggga |
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Protein
| Protein ID | habu1_s1233_g04264.t1 |
|---|---|
| Definition | - |
>habu1_s1233_g04264.t1 MTEAEVNPKAYPLADAQLTKTLLDLVQQSCNYKQLRKGANEATKTLNRGIAEFIVMAADAEPLEIILHLPLLCEDKNVPY VFVRSKQALGRACGVSRPVIACSITIKEGSQLKPQINSVQQSIERLLV |
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