Gene
| Gene Model ID | habu1_s1233_g04270 |
|---|---|
| Locus | habu1_scaffold1233 : 909835 ... 914548 : - |
| To GenomeBrowser | habu1_scaffold1233:909835..914548 |
| Genes list of scaffold | habu1_scaffold1233 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1233_g04270.t1 | 1 | 1 | CENP-M | 1 | 174 | 0.0 | 255.8 | 0.0 | 0.0 | 255.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s1233_g04270.t1 | gi|602644083|ref|XP_007428496.1| | PREDICTED: centromere protein M [Python bivittatus] | 0.0 |
| habu1_s1233_g04270.t1 | gi|327272558|ref|XP_003221051.1| | PREDICTED: centromere protein M [Anolis carolinensis] | 0.0 |
| habu1_s1233_g04270.t1 | gi|591352878|ref|XP_007053388.1| | PREDICTED: centromere protein M [Chelonia mydas] | 0.0 |
| habu1_s1233_g04270.t1 | gi|530626271|ref|XP_005302671.1| | PREDICTED: centromere protein M [Chrysemys picta bellii] | 0.0 |
| habu1_s1233_g04270.t1 | gi|564231122|ref|XP_006259959.1| | PREDICTED: LOW QUALITY PROTEIN: centromere protein M [Alligator mississippiensis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 3.2 |
| Venom grand-1 | 3.8 |
| Pit, infrared sensing | 3.7 |
| Nose | 3.1 |
| Brain-1 | 0.5 |
| Eye | 0.9 |
| fetal fibroblast | 31.8 |
| venom gland-2 | 6.3 |
| Brain-2 | 0.8 |
| Spleen | 2.4 |
| Lung | 0.5 |
| Liver | 2.8 |
| Kidney | 1.5 |
| Pancreas | 5.8 |
| Small intestine | 1.7 |
| Large intestine | 1.5 |
| Stomach | 1.1 |
| heart | 0.5 |
| ovary | 75.8 |
| cheek muscle | 0.7 |
Transcript
| Transcript ID | habu1_s1233_g04270.t1 |
|---|---|
| Definition | - |
>habu1_s1233_g04270.t1 gtttgaaaaggagaatgcgcttttcttagttgtgataatgtcgacgttgagtgcttttggcaaactcccaacacttaatt gtgcgaccattttgttggtgggaacaaatgatgttttccagcagcaactagcagaaactcttcttaaggaaagacaagat ttgaaaataaatatacatttggcagcctctcttcctttacctgtggagagaaaccacgttcgaccaaggattgatttgat tgtctttatgattaacattcaaagcaaatacagttttgaagaaatagaagcttcccttatacatgtagatgcaaactttt tccttggaaaagtgtgccttctagttactggtgtaggtagaatgaataaaataagtgtggatatggatgccatctggaag ctagcaaatcgctactgtagccctgtcttgttctgtgagcttgaatatgaaaaagtcagaactgccacagctcagagact tctccggatgttacaaatatgcgctggtcatgtatcagggatgtcttccctttctttcagttctttaatgaaatgctcca ttgaggactcaagttatttggcataaaatattattgtattttccagttttactatctgtgatttctgagtgaactgaata taagcatcactctgtcagaaataaaccttacctactattttttcata |
|
Protein
| Protein ID | habu1_s1233_g04270.t1 |
|---|---|
| Definition | - |
>habu1_s1233_g04270.t1 MSTLSAFGKLPTLNCATILLVGTNDVFQQQLAETLLKERQDLKINIHLAASLPLPVERNHVRPRIDLIVFMINIQSKYSF EEIEASLIHVDANFFLGKVCLLVTGVGRMNKISVDMDAIWKLANRYCSPVLFCELEYEKVRTATAQRLLRMLQICAGHVS GMSSLSFSSLMKCSIEDSSYLA |
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