Gene
| Gene Model ID | habu1_s1233_g04273 |
|---|---|
| Locus | habu1_scaffold1233 : 997169 ... 1006608 : + |
| To GenomeBrowser | habu1_scaffold1233:997169..1006608 |
| Genes list of scaffold | habu1_scaffold1233 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1233_g04273.t2 | 1 | 1 | PH | 22 | 117 | 4.8e-14 | 52.4 | 3.4e-17 | 8.5e-14 | 51.6 |
| habu1_s1233_g04273.t2 | 1 | 1 | DDDD | 285 | 352 | 4.1e-32 | 109.6 | 3.1e-35 | 7.7e-32 | 108.7 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 4.5 |
| Venom grand-1 | 4.2 |
| Pit, infrared sensing | 5.3 |
| Nose | 5.1 |
| Brain-1 | 3.4 |
| Eye | 3.2 |
| fetal fibroblast | 4.5 |
| venom gland-2 | 5.8 |
| Brain-2 | 3.1 |
| Spleen | 1.6 |
| Lung | 3.6 |
| Liver | 5.0 |
| Kidney | 4.7 |
| Pancreas | 2.3 |
| Small intestine | 3.2 |
| Large intestine | 4.5 |
| Stomach | 3.0 |
| heart | 7.0 |
| ovary | 2.2 |
| cheek muscle | 4.2 |
Transcript
| Transcript ID | habu1_s1233_g04273.t1 |
|---|---|
| Definition | - |
>habu1_s1233_g04273.t1 gccgtaacaggggagtccagcggaggaaggaggacacgcgactgcttaagaaaagcagggagtagataaaagacgaagct aacgtcgttctgggtaatggtgtgagcaagattactacaatgaaactcaatgaacgtagtgtggtacattatgccacatg tgagtctccagccgatcatactggctttctgtgcaagcgtatggaacgccatcatcacaaccatcatatcacctcttacc agcgccgctggttcattctcaagggcaacttgctgttctactttgaagagcgggagagctgtgaccccctgggtctcatt gtgttagagggctgcacagtggaactatgtgaagctgctgaggaatttgcttttgccatccgctttgatagcagtggtgg caaatcttatgtgttggttgctgactgccaagttgccatggaggcttgggtgaaggcactttcacgagccagctttgatt atatgaggctagtagttaaggaactagagaaacagctggaagaggctcagaggagcttagctgctagccataaatcacca aagaaattgtcttctggccgcaaaaggcatttatcaaatcccatgatgatatccatccaagagcatcctgtcatcttgga gaatggttactccacatggaacgatagttgcactcttgcagaaatggcatattctgatttcagtggaggatttctgaagc ccccacctttacctcctcgtcgaaaactgacaggcagtgctgtaggtggagcatcgttggctgggtctgcctctgccaca caggaaagtcctgtatctccagagactacctgcttctcaaagttgcataattgtcatccaggtcatggttgtcccaaagg tgctttttcaagaaaaaaaagcctcttgaaaaagcacctttgggcttcatctgacaagtggttagattcgaggaggaccg atgtaaaggggacacgaaagccccggatgccatttggtcttgtccgagtgtttgccgttgtaattccctttctctatgtt gggacacaaatcagcaaaagttttgcagctttgcttgaagaacatgatatctttgtaccagaggatgacgatgatgacga ctaataggtctacaatgtggcagtaagaggaacagagccataataaagtgttctgatatcagtgtttaa |
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| Transcript ID | habu1_s1233_g04273.t2 |
| Definition | - |
>habu1_s1233_g04273.t2 gccgtaacaggggagtccagcggaggaaggaggacacgcgactgcttaagaaaagcagggagtagataaaagacgaagct aacgtcgttctgggtaatggtgtgagcaagattactacaatgaaactcaatgaacgtagtgtggtacattatgccacatg tgagtctccagccgatcatactggctttctgtgcaagcgtatggaacgccatcatcacaaccatcatatcacctcttacc agcgccgctggttcattctcaagggcaacttgctgttctactttgaagagcgggagagctgtgaccccctgggtctcatt gtgttagagggctgcacagtggaactatgtgaagctgctgaggaatttgcttttgccatccgctttgatagcagtggtgg caaatcttatgtgttggttgctgactgccaagttgccatggaggcttgggtgaaggcactttcacgagccagctttgatt atatgaggctagtagttaaggaactagagaaacagctggaagaggctcagaggagcttagctgctagccataaatcacca aagaaattgtcttctggccgcaaaaggcatttatcaaatcccatgatgatatccatccaagagcatcctgtcatcttgga gaatggttactccacatggaacgatagttgcactcttgcagaaatggcatattctgatttcagtggaggatttctgaagc ccccacctttacctcctcgtcgaaaactgacaggcagtgctgtaggtggagcatcgttggctgggtctgcctctgccaca caggaaagtcctgtatctccagagactacctgcttctcaaagttgcataattggtatggtcaggaaattgcagaggggag gagctgcctagaggagatggcttcgcggttgtggtcagcggctggctcttgggcaaggttgcgtcccgtcgagaagcaga aggcgcccttagcaaccgttttatcctcacgaaatataaccgtcactcggactggcgccatcttgcctaagcccgtcaaa atgccatttggtcttgtccgagtgtttgccgttgtaattccctttctctatgttgggacacaaatcagcaaaagttttgc agctttgcttgaagaacatgatatctttgtaccagaggatgacgatgatgacgactaataggtctacaatgtggcagtaa gaggaacagagccataataaagtgttctgatatcagtgtttaa |
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Protein
| Protein ID | habu1_s1233_g04273.t1 |
|---|---|
| Definition | - |
>habu1_s1233_g04273.t1 MKLNERSVVHYATCESPADHTGFLCKRMERHHHNHHITSYQRRWFILKGNLLFYFEERESCDPLGLIVLEGCTVELCEAA EEFAFAIRFDSSGGKSYVLVADCQVAMEAWVKALSRASFDYMRLVVKELEKQLEEAQRSLAASHKSPKKLSSGRKRHLSN PMMISIQEHPVILENGYSTWNDSCTLAEMAYSDFSGGFLKPPPLPPRRKLTGSAVGGASLAGSASATQESPVSPETTCFS KLHNCHPGHGCPKGAFSRKKSLLKKHLWASSDKWLDSRRTDVKGTRKPRMPFGLVRVFAVVIPFLYVGTQISKSFAALLE EHDIFVPEDDDDDD |
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| Protein ID | habu1_s1233_g04273.t2 |
| Definition | - |
>habu1_s1233_g04273.t2 MKLNERSVVHYATCESPADHTGFLCKRMERHHHNHHITSYQRRWFILKGNLLFYFEERESCDPLGLIVLEGCTVELCEAA EEFAFAIRFDSSGGKSYVLVADCQVAMEAWVKALSRASFDYMRLVVKELEKQLEEAQRSLAASHKSPKKLSSGRKRHLSN PMMISIQEHPVILENGYSTWNDSCTLAEMAYSDFSGGFLKPPPLPPRRKLTGSAVGGASLAGSASATQESPVSPETTCFS KLHNWYGQEIAEGRSCLEEMASRLWSAAGSWARLRPVEKQKAPLATVLSSRNITVTRTGAILPKPVKMPFGLVRVFAVVI PFLYVGTQISKSFAALLEEHDIFVPEDDDDDD |
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