Gene
| Gene Model ID | habu1_s1233_g04274 |
|---|---|
| Locus | habu1_scaffold1233 : 1009319 ... 1014528 : - |
| To GenomeBrowser | habu1_scaffold1233:1009319..1014528 |
| Genes list of scaffold | habu1_scaffold1233 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| nadh dehydrogenase | GO:0005747 GO:0006979 GO:0055114 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1233_g04274.t1 | 1 | 1 | Complex1_LYR | 32 | 92 | 2.0e-09 | 37.0 | 5.5e-13 | 2.7e-09 | 36.6 |
| habu1_s1233_g04274.t1 | 1 | 1 | Complex1_LYR_1 | 32 | 92 | 7.5e-06 | 26.0 | 2.5e-09 | 1.2e-05 | 25.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s1233_g04274.t1 | gi|327272564|ref|XP_003221054.1| | PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 [Anolis carolinensis] | 0.0 |
| habu1_s1233_g04274.t1 | gi|696968878|ref|XP_009554903.1| | PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 [Cuculus canorus] | 0.0 |
| habu1_s1233_g04274.t1 | gi|602644093|ref|XP_007428501.1| | PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 [Python bivittatus] | 0.0 |
| habu1_s1233_g04274.t1 | gi|194473636|ref|NP_001123977.1| | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 [Rattus norvegicus] | 0.0 |
| habu1_s1233_g04274.t1 | gi|297747277|ref|NP_001172107.1| | NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 6, 14kDa [Sus scrofa] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 14.8 |
| Venom grand-1 | 25.9 |
| Pit, infrared sensing | 18.8 |
| Nose | 15.6 |
| Brain-1 | 8.8 |
| Eye | 15.2 |
| fetal fibroblast | 22.1 |
| venom gland-2 | 20.5 |
| Brain-2 | 9.2 |
| Spleen | 12.6 |
| Lung | 9.8 |
| Liver | 21.4 |
| Kidney | 13.0 |
| Pancreas | 33.8 |
| Small intestine | 12.6 |
| Large intestine | 17.1 |
| Stomach | 32.3 |
| heart | 70.3 |
| ovary | 38.7 |
| cheek muscle | 82.6 |
Transcript
| Transcript ID | habu1_s1233_g04274.t1 |
|---|---|
| Definition | - |
>habu1_s1233_g04274.t1 atatctctttgtacataccacaatgcttctaccacacataaatctctacggtagcagaccctagtctgagtttactatgc aatgttcatcttaaattctctcaatgctattggtcactatccgtaagtgggtagtcctctcttctagtcataaagctaga gattagccaatcgtcagtcttctttaggtgaatgtcataattgttagccaatagacactctcttactctttgaaggaaac gatgagggcggggtttgtttatctgaacgggaaacatggcggctgccggggctgggaaggtggcaggcacagctgtcgga gccgtagtaaaaccaatcttcagtcgggatttggctgaagccaaacggcacgtgagagaattatatagaacttggtaccg cgaaatcccaaatactgtgcatacgtaccagctggagattacagtgaaacaggggcgtgataaggtgcgagagttgttca tgaaaaatgcccatgctacagaccccagaattattgatttgcttgttattaagggaaaaatggaattccaagaaacaatc aatgtgtggaaacaaaagacccatataatgagattttttcatgagacagaaacaccacaacccacggatttcctatccaa gttttacacgggccatgatccttgaactaaatcatcaatagagaataatgactctatttctgttccaaataaatgccttt atcttactattcttc |
|
Protein
| Protein ID | habu1_s1233_g04274.t1 |
|---|---|
| Definition | - |
>habu1_s1233_g04274.t1 MAAAGAGKVAGTAVGAVVKPIFSRDLAEAKRHVRELYRTWYREIPNTVHTYQLEITVKQGRDKVRELFMKNAHATDPRII DLLVIKGKMEFQETINVWKQKTHIMRFFHETETPQPTDFLSKFYTGHDP |
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