Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s1235_g04291
Locus habu1_scaffold1235 : 213962 ... 246105 : -
To GenomeBrowser habu1_scaffold1235:213962..246105
Genes list of scaffold habu1_scaffold1235

Blast Hit to nr / sp
query Subject ID Subject Name evalue
habu1_s1235_g04291.t1 gi|602632771|ref|XP_007423273.1| PREDICTED: uncharacterized protein KIAA1467 homolog isoform X3 [Python bivittatus] 0.0
habu1_s1235_g04291.t1 gi|602632767|ref|XP_007423271.1| PREDICTED: uncharacterized protein KIAA1467 homolog isoform X1 [Python bivittatus] 0.0
habu1_s1235_g04291.t1 gi|602632769|ref|XP_007423272.1| PREDICTED: uncharacterized protein KIAA1467 homolog isoform X2 [Python bivittatus] 0.0
habu1_s1235_g04291.t1 gi|637347823|ref|XP_008117740.1| PREDICTED: uncharacterized protein KIAA1467 homolog [Anolis carolinensis] 0.0
habu1_s1235_g04291.t1 gi|591379200|ref|XP_007064148.1| PREDICTED: uncharacterized protein KIAA1467 homolog [Chelonia mydas] 0.0

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 4.8
Venom grand-1 35.5
Pit, infrared sensing 4.1
Nose 4.6
Brain-1 21.2
Eye 6.5
fetal fibroblast 2.1
venom gland-2 49.1
Brain-2 23.9
Spleen 6.2
Lung 9.9
Liver 14.6
Kidney 2.7
Pancreas 17.4
Small intestine 1.2
Large intestine 3.2
Stomach 8.9
heart 11.3
ovary 34.6
cheek muscle 1.9

Transcript
Transcript IDhabu1_s1235_g04291.t1
Definition-
>habu1_s1235_g04291.t1
aggaaaagccgccatcggcacaggaacccaaaccggaagccgggtttgctgttgtgataagcaaatcatatctaatttat
ctattggtgatctccttttctttagcttctttagaatgcactttggggggggagggggagagggctgacaaaatgtttag
atttcaaaatcatgatagagggaaatggataggaaatgtcaattcaggtttgcatgatggcacatatgccaatttatttt
gtgagttaagagtataggaggcagaagagtcgagcgcatgcgcgtctcttgtcgccagcatggctacggtgctgtcacgg
gcgctgaagctgccaggtaaaaagagtccagatcttggagaatatgaccctctcactcaggctgacagtgatgagagcga
agatgacttggtcctcaatctgcagaagaatggtggagttaaaaatgggaaaagtcccctcagggaaatccaggatgtgg
attccgatgtggaagctggtatagccaagcagcatctctcggagggtatgacagaagagtacccaagtgaaatgaacaat
ggtttggagcagaagacaaccggttccttgatgccttatttgcgcactgccatctttttactcactgtggttatctccat
gatccttgtgctggtatgtgctttcctcattccttgtccaccaagagacttacataatacttggattcacaacctaggtc
aagtggcagatggagttctgtttccaccagaactttttgatgtaaataatgatggtatccctgatgtcttactctccttc
acagctttgaaaaatgctagtgtactgggtgtctccacaccatgggtaacaataatggcactttcgggtatgaacggcag
catcttatggtccagtcatgttaaagaagagattctgcgtgtgcagtgtaagaatttggactctgcattctctgtagaac
ctgtctgccttgttactgggacctctacattcctcagtcttctgagtgcctcatcagggaagccagtttggacctttgat
tcctcccactttcctaatggaattttggctgctccagctgttgttatacctgatgtggatggagatcgggtcagcgattt
gatggtcttgaccattggtaaaacacagccagagttaagctttatcttgatatcgggtaaaactggaaaccctgtgggag
gacctgtgaagtacaatatcattagaagaggaaaactgattggtccacagacttatatcaccagccatggagcagtctac
atcctgtttggctttggtccggtctatgcagttgctttacgagatatctttgctcaggccagaaatcatgataatttccc
tccagtactgcagcatgaagaaccagagtgggagaaacacagatcggtcaatatgttagagttcattgatatttacagtg
gaggcgttgtgtttctacaggcagtgaaatctcctgacagcaattgcagtgaccttttgatcaccactgaacatggtttg
actttactgcaaggtcaggatttggaacagcgttggactctagaacagccggatattgacagccagccttgcccagggtt
cttcaatgatgatcaaacttcggactttatgcttcaggcacggcatggaaatgtctctagaaagattctggttgtggatg
caatctctcttcaaaagcttggaacccaggccaaggattcaccatctttatcttctccatcctactttcccttcagtcct
tttggacctgagtaatacgacagacccagtaattgcttcatctattggaataaatgatcttcaaaaagatgccttttata
ttactgtgacaagaagtcccacttctgaacaccagccaggggttctgtctgttaggaagcttcgcctgcggtgggcgttg
atgacacagagccgggatgtacctctgaaagacacagatcccaaaatcaatcatggggaactgaggcggattctttctag
gatcaaatttattgatcttgctcagaagttctagacatatatctcaggtgttctgagtgacaaatatggagctcaatgtc
tacaaccaagctggtcagtcagactttatgaaaacttcagttaatgaagaatggggactaagtccagatgttttaggact
gggaaagccgaactgttcatccttaagtatcctgacttgaaggaaagctgctcgtccctttgtttgctatttacatgtct
gcagacttctttccaggtggtttgaatgtgtgtatttaaacagggatattggggtatgtgtgtataaatatattgctacc
ttaatttatgaaat

Protein
Protein IDhabu1_s1235_g04291.t1
Definition-
>habu1_s1235_g04291.t1
MATVLSRALKLPGKKSPDLGEYDPLTQADSDESEDDLVLNLQKNGGVKNGKSPLREIQDVDSDVEAGIAKQHLSEGMTEE
YPSEMNNGLEQKTTGSLMPYLRTAIFLLTVVISMILVLVCAFLIPCPPRDLHNTWIHNLGQVADGVLFPPELFDVNNDGI
PDVLLSFTALKNASVLGVSTPWVTIMALSGMNGSILWSSHVKEEILRVQCKNLDSAFSVEPVCLVTGTSTFLSLLSASSG
KPVWTFDSSHFPNGILAAPAVVIPDVDGDRVSDLMVLTIGKTQPELSFILISGKTGNPVGGPVKYNIIRRGKLIGPQTYI
TSHGAVYILFGFGPVYAVALRDIFAQARNHDNFPPVLQHEEPEWEKHRSVNMLEFIDIYSGGVVFLQAVKSPDSNCSDLL
ITTEHGLTLLQGQDLEQRWTLEQPDIDSQPCPGFFNDDQTSDFMLQARHGNVSRKILVVDAISLQKLGTQAKDSPSLSSP
SYFPFSPFGPE

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