Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s1235_g04292
Locus habu1_scaffold1235 : 252486 ... 263905 : +
To GenomeBrowser habu1_scaffold1235:252486..263905
Genes list of scaffold habu1_scaffold1235

Blast Hit to nr / sp
query Subject ID Subject Name evalue
habu1_s1235_g04292.t1 gi|704303023|ref|XP_010163496.1| PREDICTED: uncharacterized protein LOC104519847 [Caprimulgus carolinensis] 1.96182e-44
habu1_s1235_g04292.t1 gi|529435330|ref|XP_005237440.1| PREDICTED: uncharacterized protein LOC101912328 [Falco peregrinus] 1.00053e-42
habu1_s1235_g04292.t1 gi|700435829|ref|XP_009956934.1| PREDICTED: uncharacterized protein LOC104341859 [Leptosomus discolor] 1.00053e-42
habu1_s1235_g04292.t1 gi|543728768|ref|XP_005505461.1| PREDICTED: uncharacterized protein LOC102086159 isoform X1 [Columba livia] 3.00018e-42
habu1_s1235_g04292.t1 gi|723542984|ref|XP_010311501.1| PREDICTED: uncharacterized protein LOC104643780 [Balearica regulorum gibbericeps] 4.99983e-42

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 4.5
Venom grand-1 515.7
Pit, infrared sensing 6.9
Nose 1.5
Brain-1 0.9
Eye 1.6
fetal fibroblast 1.4
venom gland-2 272.2
Brain-2 0.6
Spleen 0.6
Lung 12.4
Liver 0.1
Kidney 1.0
Pancreas 0.4
Small intestine 0.5
Large intestine 3.3
Stomach 3.0
heart 3.0
ovary 0.8
cheek muscle 1.7

Transcript
Transcript IDhabu1_s1235_g04292.t1
Definition-
>habu1_s1235_g04292.t1
agaagaggaaacagagacttcttgagagcattgtcctgtgaaatccagagatcgtggtacctgctttcacttaaactgcc
taaaagtcagacattaggatcaaagaatatgaaagttctgaccaagcccatcctacgtgctctcccatttcttctcttgt
tccactccctgcccaacagcctttgtaagaaggagtttctggatcagattcaggagtgggactatagagacggagctgac
aaggtcaaggttcaagacaccaagagcatcacacgcctactggagaagtggggaaacagcatcttttggcaaataaaatt
ctctttgttgagtcaccctgacaccctgctgccagaactgtctagcctccggcctgcttcagaagcaattgataatctcc
tgaaacaagtagattcaataaagtcaagattggcagaactgaatgagaggcttaggatcatagaaagggctccgtttgtt
atccgctacaaggccagaaggagtcagaagcttactaacctccagctgcaaagactaccagagaagaggacacacgcatg
gaggcgagctcagagggattaatttgttttttatgaaggaagaagactagaaattcctgagattcttaagaaaccacaca
ataaaagcctggttaaaaagacataca

Protein
Protein IDhabu1_s1235_g04292.t1
Definition-
>habu1_s1235_g04292.t1
MKVLTKPILRALPFLLLFHSLPNSLCKKEFLDQIQEWDYRDGADKVKVQDTKSITRLLEKWGNSIFWQIKFSLLSHPDTL
LPELSSLRPASEAIDNLLKQVDSIKSRLAELNERLRIIERAPFVIRYKARRSQKLTNLQLQRLPEKRTHAWRRAQRD

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