Gene
| Gene Model ID | habu1_s1235_g04294 |
|---|---|
| Locus | habu1_scaffold1235 : 301588 ... 307745 : - |
| To GenomeBrowser | habu1_scaffold1235:301588..307745 |
| Genes list of scaffold | habu1_scaffold1235 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1235_g04294.t1 | 1 | 1 | 7tm_3 | 39 | 270 | 9.9e-33 | 113.4 | 4.9e-36 | 1.2e-32 | 113.1 |
| habu1_s1235_g04294.t1 | 1 | 1 | Tetraspannin | 131 | 243 | 1.2e-06 | 27.9 | 4.8e-10 | 1.2e-06 | 27.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s1235_g04294.t1 | gi|602632763|ref|XP_007423269.1| | PREDICTED: retinoic acid-induced protein 3 [Python bivittatus] | 0.0 |
| habu1_s1235_g04294.t1 | gi|327272650|ref|XP_003221097.1| | PREDICTED: retinoic acid-induced protein 3 [Anolis carolinensis] | 0.0 |
| habu1_s1235_g04294.t1 | gi|696968985|ref|XP_009554941.1| | PREDICTED: retinoic acid-induced protein 3-like [Cuculus canorus] | 0.0 |
| habu1_s1235_g04294.t1 | gi|704294184|ref|XP_010160753.1| | PREDICTED: retinoic acid-induced protein 3-like [Caprimulgus carolinensis] | 0.0 |
| habu1_s1235_g04294.t1 | gi|543728793|ref|XP_005505473.1| | PREDICTED: retinoic acid-induced protein 3 [Columba livia] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 15.0 |
| Venom grand-1 | 12.1 |
| Pit, infrared sensing | 10.0 |
| Nose | 24.3 |
| Brain-1 | 1.8 |
| Eye | 6.3 |
| fetal fibroblast | 0.0 |
| venom gland-2 | 29.6 |
| Brain-2 | 0.7 |
| Spleen | 0.0 |
| Lung | 26.6 |
| Liver | 0.2 |
| Kidney | 0.0 |
| Pancreas | 0.0 |
| Small intestine | 0.6 |
| Large intestine | 31.0 |
| Stomach | 0.3 |
| heart | 0.3 |
| ovary | 0.1 |
| cheek muscle | 0.2 |
Transcript
| Transcript ID | habu1_s1235_g04294.t1 |
|---|---|
| Definition | - |
>habu1_s1235_g04294.t1 ctgttttctctatttgcttttaaagcttcccaggagagcgtgagagcaattctctgcttgtccatgcaaggacagaaaag cagcaagagcggagattatttttcaggtggacagtgcaggcatattcctttgctgttgactacaacttgtcttcttctct gaaccagatcacagtcaaggttttcttttaagataagccatctgaagtgccatggctactactgaagccccccaaggctg tggcaacatacacagtgactactatttcctctgcgataccaatgcttattgggggattattctggaagctctggcagcag ctggtgcaattaccacaatcaccctcattctggtgcttttatgttttatccgtaaagtccaagacaatgcaaaacgcagc ctgatcccaatccagttcctcttcctcttaggcactctaggaatttttggcctcacatttgcttttatcatcaggctcaa taagcaaactgctcccactcgtttcttcctttttggggtcctctttgccctctgcttttcctgccttctggctcatgcct tggaccttgtcaagttggtgagaggaagacgtccattttcagcattagggttgctgattatggtctttggtttgactatt gtacaagcaattatagccatacagtatgtagtagtcaatatcacagccttgaagaaactacacaatgagatggattcgga aagccaaagagactttgttttaattctcatctatgtacttttcctgatgtttctcctctgcgtagtttccatgtttgtgt tttgtggctcatacaagaggtggaagaggcatggtgtctacttaatcctcacagccttggtctccataggcatttgggtg gcatggattgctatcttgatgcatggcatcagtggtttaggtgaaccatcagaatggaatgatcctctcattggggttac tctgatagtaaatggctgggctttcctgcttctgtatgcaatacctgaactctgtgtcctcactgctccacggaagcctg gagactaccctcaggagaataatacttgccagccaaagggcatgaaaaaaacctatggagtagaaaatgaaggttatgct caggaagacaacacacaagaagaaaatactggctcatatgtcccttattcaactcattttcaactgaagaaccttgagcc tcaacaggacttctccattccccgccctaaaacacggcccagtccataccaagagtattctggagggaaagatatcaaaa aatagcatcacaatgaagaaagagaagcaacgctgaagtgttggtatagcagtgcttcagttttgcaaaatcagggacac tgctcacattacagtggatgaaggaagattgtttttgttttcttctgtatgtcttctggctcagcacacttagcacttta tacctctgaattcagtaataaacctcttttgctttttttcacat |
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Protein
| Protein ID | habu1_s1235_g04294.t1 |
|---|---|
| Definition | - |
>habu1_s1235_g04294.t1 MATTEAPQGCGNIHSDYYFLCDTNAYWGIILEALAAAGAITTITLILVLLCFIRKVQDNAKRSLIPIQFLFLLGTLGIFG LTFAFIIRLNKQTAPTRFFLFGVLFALCFSCLLAHALDLVKLVRGRRPFSALGLLIMVFGLTIVQAIIAIQYVVVNITAL KKLHNEMDSESQRDFVLILIYVLFLMFLLCVVSMFVFCGSYKRWKRHGVYLILTALVSIGIWVAWIAILMHGISGLGEPS EWNDPLIGVTLIVNGWAFLLLYAIPELCVLTAPRKPGDYPQENNTCQPKGMKKTYGVENEGYAQEDNTQEENTGSYVPYS THFQLKNLEPQQDFSIPRPKTRPSPYQEYSGGKDIKK |
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