Gene
| Gene Model ID | habu1_s1235_g04302 |
|---|---|
| Locus | habu1_scaffold1235 : 444821 ... 450585 : - |
| To GenomeBrowser | habu1_scaffold1235:444821..450585 |
| Genes list of scaffold | habu1_scaffold1235 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| 39s ribosomal protein mitochondrial | GO:0003735 GO:0005615 GO:0005739 GO:0005840 GO:0006412 GO:0008097 GO:0035928 GO:0042254 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s1235_g04302.t1 | gi|602668270|ref|XP_007439685.1| | PREDICTED: 39S ribosomal protein L18, mitochondrial [Python bivittatus] | 0.0 |
| habu1_s1235_g04302.t1 | gi|637255422|ref|XP_008121506.1| | PREDICTED: 39S ribosomal protein L18, mitochondrial [Anolis carolinensis] | 0.0 |
| habu1_s1235_g04302.t1 | gi|558125216|ref|XP_006115074.1| | PREDICTED: 39S ribosomal protein L18, mitochondrial isoform X1 [Pelodiscus sinensis] | 0.0 |
| habu1_s1235_g04302.t1 | gi|591382433|ref|XP_007065747.1| | PREDICTED: 39S ribosomal protein L18, mitochondrial [Chelonia mydas] | 0.0 |
| habu1_s1235_g04302.t1 | gi|558125221|ref|XP_006115075.1| | PREDICTED: 39S ribosomal protein L18, mitochondrial isoform X2 [Pelodiscus sinensis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 19.7 |
| Venom grand-1 | 67.0 |
| Pit, infrared sensing | 28.5 |
| Nose | 21.3 |
| Brain-1 | 17.5 |
| Eye | 20.3 |
| fetal fibroblast | 27.9 |
| venom gland-2 | 36.7 |
| Brain-2 | 18.4 |
| Spleen | 40.3 |
| Lung | 37.2 |
| Liver | 132.3 |
| Kidney | 77.9 |
| Pancreas | 125.4 |
| Small intestine | 36.4 |
| Large intestine | 47.2 |
| Stomach | 66.4 |
| heart | 67.2 |
| ovary | 91.1 |
| cheek muscle | 59.6 |
Transcript
| Transcript ID | habu1_s1235_g04302.t1 |
|---|---|
| Definition | - |
>habu1_s1235_g04302.t1 aaacgacccacccttttttcgcgggacgaccaatgagaacagacggtttctcagacgtgatggcgttcaggaggttgact ccgccgctgagcagggcggccaagacattccgggaagccgagcacggagttaaatttaattcttctgttcccaattccat acctcttcctgatgaagtagatacaaaagaaaatgagattgttgctcctgagttcacaaataggaacccacataatttag aaagattggctatagcaagaaaggatctaggttggaaaacctcatggccaaaacgggattattggtacaggttacgattt gaaaaaacccaaaaacatgtggaaggctacattgaacattgcagcggtcatattgtagtttctgcttccactcgcgagtg ggctattaagaagcatctttataaaacaaccggtgtggcagcatgtgagaatgtggggcgtgtattagcacaacgttgtc tcgaagctggaatcaactttgtggatgacaaggctacaattccatgggaaaaacatggcgaagggctgaaacgtttcaaa caggctatgactgaaggtggtgttgaactgacagaacttgaaagaatttataataaatatggtgacaagctgcccaaaga agtacagcctcagaatcctgcagttccatccttggaggacaaccaatcacacaccgctcttaatacataatactgtttaa tctttttatattaaataaaaatccaacagatgtacaactgc |
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Protein
| Protein ID | habu1_s1235_g04302.t1 |
|---|---|
| Definition | - |
>habu1_s1235_g04302.t1 MRTDGFSDVMAFRRLTPPLSRAAKTFREAEHGVKFNSSVPNSIPLPDEVDTKENEIVAPEFTNRNPHNLERLAIARKDLG WKTSWPKRDYWYRLRFEKTQKHVEGYIEHCSGHIVVSASTREWAIKKHLYKTTGVAACENVGRVLAQRCLEAGINFVDDK ATIPWEKHGEGLKRFKQAMTEGGVELTELERIYNKYGDKLPKEVQPQNPAVPSLEDNQSHTALNT |
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