Gene
| Gene Model ID | habu1_s1235_g04303 |
|---|---|
| Locus | habu1_scaffold1235 : 450726 ... 462461 : + |
| To GenomeBrowser | habu1_scaffold1235:450726..462461 |
| Genes list of scaffold | habu1_scaffold1235 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| t-complex protein 1 subunit alpha | GO:0000242 GO:0001669 GO:0002199 GO:0005524 GO:0005720 GO:0005794 GO:0005832 GO:0005874 GO:0006457 GO:0007339 GO:0044053 GO:0044297 GO:0044822 GO:0051082 GO:0070062 GO:1901998 GO:2000109 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1235_g04303.t1 | 1 | 1 | Cpn60_TCP1 | 30 | 534 | 0.0 | 485.6 | 0.0 | 0.0 | 485.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s1235_g04303.t1 | gi|602668272|ref|XP_007439686.1| | PREDICTED: T-complex protein 1 subunit alpha [Python bivittatus] | 0.0 |
| habu1_s1235_g04303.t1 | gi|327261995|ref|XP_003215812.1| | PREDICTED: T-complex protein 1 subunit alpha [Anolis carolinensis] | 0.0 |
| habu1_s1235_g04303.t1 | gi|557277785|ref|XP_006021976.1| | PREDICTED: T-complex protein 1 subunit alpha [Alligator sinensis] | 0.0 |
| habu1_s1235_g04303.t1 | gi|558125212|ref|XP_006115073.1| | PREDICTED: T-complex protein 1 subunit alpha [Pelodiscus sinensis] | 0.0 |
| habu1_s1235_g04303.t1 | gi|543345058|ref|XP_005518441.1| | PREDICTED: T-complex protein 1 subunit alpha [Pseudopodoces humilis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 108.7 |
| Venom grand-1 | 368.5 |
| Pit, infrared sensing | 186.7 |
| Nose | 124.7 |
| Brain-1 | 39.7 |
| Eye | 120.9 |
| fetal fibroblast | 385.4 |
| venom gland-2 | 345.9 |
| Brain-2 | 42.2 |
| Spleen | 134.0 |
| Lung | 155.1 |
| Liver | 307.9 |
| Kidney | 297.2 |
| Pancreas | 239.3 |
| Small intestine | 316.4 |
| Large intestine | 182.9 |
| Stomach | 295.3 |
| heart | 129.0 |
| ovary | 207.8 |
| cheek muscle | 329.9 |
Transcript
| Transcript ID | habu1_s1235_g04303.t1 |
|---|---|
| Definition | - |
>habu1_s1235_g04303.t1 gaggggcggagctacccagaaggcctcgcctcgccctccgcaatccctgcaggctcgtgcgcgttgccgcctcggtctct ttgtccgggaaaatggcgctggaggggcctttggcggtctttggggagcgggacaccggcgacagcgtccgggcgcaaaa cgttacagctgctgcttcaattgccaatattgtaaagagttcactgggtccagttggattggataaaatgctggtggatg acattggtgatgtgaccattactaatgatggtgcaactattctgaagttgttggaggtagagcatcctgctgcaaaagta ctgtgtgaactagcagaattgcaagacaaagaagttggagatgggactacttctgtggtaattgttgctgcagaactttt gaaaaatgcagatgaattggtgaaacagaaaattcatccgacttctgtcattagtggatatcgtcttgcttgcaaggagg cagttcgttacatcaatgaaaatttggttattaactcagatgagctgggcaaagactgtcttattaatgcagcaaaaaca tcaatgtcatccaaaatcattggagttgacagcgacttctttgccaacattgtagtagatgctgtacttgcagtaaaata cacagatcaaaagggacaaccacattatcctatcagctctatcaatgttttgaaggcacatggtcgcagtcagaaagaga gtattcttgtaaatggctatgcattaaactgtgttgtgggatcccaaggtatgcctaagagaatagttaacgccaaaatt gcatgccttgatttcagcctacagaaaactaaaatgaagctcggtgttcaggtggtaatcacagacccagaaaaactgga tcagattagacagagagaggctgacatcactaaagaaaaaattcagaagatcctggctacaggagcaaatgttattttga ccactgggggcattgatgatatgtgtctgaagtacttcgtggatgctggtgctatggcagtacgcagagttctgaaaaga gaccttaaacgcattgctaaggcttctggagccactgcttgttctaatctggcaaatctggaaggtgaagaaacttttga agcatcaatgctgggacaagcagaagaggtggttcaagaacgaatttgtgatgatgaattgattttaattaaaaatacta aggcacggacttcagctgccattatattacgaggagcaaatgacttcatgtgtgatgaaatggagaggtctttgcatgat gctctttgtgtggtcaaaagaatactagagtcaaagtcggttgtaccgggaggtggtgcagttgaagcagcactttctat ttatctagaaaattatgcaactagcatgggatcacgggagcagcttgctatagcagaatttgcaagatctcttctagtta ttccaaatacattagcagttaatgctgctcaagatgctatagaccttgttgcaaagctcagagcatttcacaatgaagct caagtgaatccagatcgcaaaaatttgaagtggatcggtcttgatttaatcaatgggaaaccacgtgacaacaaacaagc cggtgtatatgagcctactatagtcaaaataaagagcttaaagtttgcaacagaagcagcaattactattcttcgaattg atgatattattaagttgcaccctgaaagtaaaggtgaaaaaggaggatgctatgaagatgcagttcagtctggagcaatt gaaaactaaatgaattattatttgcctattcctgtgaaatgctctcaagtctgtagtaactagtttgttgatgaaagcaa gctgtcaagacttttgcataactagaaaataaatgaaatatggccatattttgta |
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Protein
| Protein ID | habu1_s1235_g04303.t1 |
|---|---|
| Definition | - |
>habu1_s1235_g04303.t1 MALEGPLAVFGERDTGDSVRAQNVTAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPAAKVLCEL AELQDKEVGDGTTSVVIVAAELLKNADELVKQKIHPTSVISGYRLACKEAVRYINENLVINSDELGKDCLINAAKTSMSS KIIGVDSDFFANIVVDAVLAVKYTDQKGQPHYPISSINVLKAHGRSQKESILVNGYALNCVVGSQGMPKRIVNAKIACLD FSLQKTKMKLGVQVVITDPEKLDQIRQREADITKEKIQKILATGANVILTTGGIDDMCLKYFVDAGAMAVRRVLKRDLKR IAKASGATACSNLANLEGEETFEASMLGQAEEVVQERICDDELILIKNTKARTSAAIILRGANDFMCDEMERSLHDALCV VKRILESKSVVPGGGAVEAALSIYLENYATSMGSREQLAIAEFARSLLVIPNTLAVNAAQDAIDLVAKLRAFHNEAQVNP DRKNLKWIGLDLINGKPRDNKQAGVYEPTIVKIKSLKFATEAAITILRIDDIIKLHPESKGEKGGCYEDAVQSGAIEN |
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