Gene
| Gene Model ID | habu1_s1250_g04349 |
|---|---|
| Locus | habu1_scaffold1250 : 303000 ... 349305 : - |
| To GenomeBrowser | habu1_scaffold1250:303000..349305 |
| Genes list of scaffold | habu1_scaffold1250 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1250_g04349.t1 | 1 | 1 | F-box | 753 | 797 | 2.6e-09 | 36.4 | 8.9e-13 | 2.6e-09 | 36.4 |
| habu1_s1250_g04349.t1 | 1 | 1 | F-box-like | 756 | 799 | 2.5e-11 | 43.1 | 2.4e-14 | 7.0e-11 | 41.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s1250_g04349.t1 | gi|637261470|ref|XP_008101467.1| | PREDICTED: uncharacterized protein LOC103277653 isoform X1 [Anolis carolinensis] | 0.0 |
| habu1_s1250_g04349.t1 | gi|637261474|ref|XP_008101468.1| | PREDICTED: uncharacterized protein LOC103277653 isoform X2 [Anolis carolinensis] | 0.0 |
| habu1_s1250_g04349.t1 | gi|637261490|ref|XP_008101471.1| | PREDICTED: uncharacterized protein LOC103277653 isoform X5 [Anolis carolinensis] | 0.0 |
| habu1_s1250_g04349.t1 | gi|530612337|ref|XP_005297761.1| | PREDICTED: uncharacterized protein LOC101945119 isoform X3 [Chrysemys picta bellii] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.7 |
| Venom grand-1 | 9.1 |
| Pit, infrared sensing | 0.5 |
| Nose | 3.0 |
| Brain-1 | 0.2 |
| Eye | 0.1 |
| fetal fibroblast | 0.0 |
| venom gland-2 | 27.2 |
| Brain-2 | 0.2 |
| Spleen | 0.0 |
| Lung | 0.4 |
| Liver | 0.0 |
| Kidney | 0.2 |
| Pancreas | 0.2 |
| Small intestine | 0.0 |
| Large intestine | 0.1 |
| Stomach | 0.2 |
| heart | 0.1 |
| ovary | 4.0 |
| cheek muscle | 0.1 |
Transcript
| Transcript ID | habu1_s1250_g04349.t1 |
|---|---|
| Definition | - |
>habu1_s1250_g04349.t1 cgcagtttcctttgcttttggagcctggttaggagcatgctgccgatggaggagggcttgttcagataccaccggttctg gcttgttgaatgatggcgaactcatttcatgtgtgacaacagggtgttctattgattcagtcagatgtgccacacacaaa gaaaacctgaagttttactcacacagggagagatatttgcttgtctttgcatgagatggcaggaaatatttctacgggag aaaaacagatggaatatctgtctcagaacatactatacccatctgttggtaatactgttcatgaaatctctgtatcattt actcctatatcttcctatggaaaaatagtgccttattcagcagataataacaattccatacagtctagaagttgtttgtt gaattttacaactgatactaagatgggctttgaagaacccaacgaaacagtaaatggaaaaaagccttcaactattggga atctccctgaagtgacctctctaagaaaggaaggaacagcaagagctacagctggtcttgcagaaagaaaatgcttaaag aatacatgtatttcaggatcagataatgaactacatagggaatgtagcatccctgagattcaaaaactcaaacatgtaaa ttggacagaattgtttcttgatcagtctcccattggggatagcattcaggaaagtaatcaacctgtctgggatcactgca tattaaaaaagatggttcaaagtaacaggggcaaagatggcataaataaaaagcctgacacttttgatccaaagctgtta tatgcaaatattttaaaaagttctgtagcctttgaaaataattcagagaattttgaacaagaaactcccgggactttggt aactaataatacatcatgtcctgcaagcattatttcaaattccagccagtcagccaagcataaaaatgaaaactattttt gggctccactcagtgacagttcagatgaagagtggacagaaaataatttaaagtggacaactatggacagcaaaaattat aaaagtgctaactttgacaatccaactattatgaaatatttcagttcatcaatgccggaagatgaatttacgttcaaaat aatgcttgacagctacgaagaatggaattcaggaatggaaaccttggatattcaaaaatataaatgcaagagttttaccc agactccaaaatatgaagattttagtagaagacggaattccataaaaagcaaccatgaaaagtctacaaatgaaaatatc cattttcatttcaagtctacagtagaaaaagatatgctgagggatcaggtgttagatattccacctctagagagagcctc agaccagagaaatgaatctaaattacagcaaacgctggaaatggacaagatctttaaagggaggaaaaataaacaggaag tcaattttaacaaaaatagttgcgatacatatcaaaaagatgcagaattaatatctccattggaatattcagttatgcaa attaagagcagttcggagagttcattactgaagccttcagaaaataatacttataaagtaaataatacttataaagagga ctcagactctttgaatcacaaaagcatgaataagagcaatagtgactgcattttgctagctaggcctcaccagatcaggg atgaccaggtagtccataagccttgtatcgtctccaaaaatgagcaaagctctataaatgataatatttctgcaactggc ctcaaatcagcatttggtgctgaagaattcctcactgcaactgttaaaggggatggtcatgagaaaccactttgcagcaa tacattcccattagatttcagccataatgatggcattttggctaaatattatttttatttgaactatctcaataagtcca aaagatttcggggtgaaaatgcccatcggttctttttttgtcaagaacatgatttgttcaaagaagcctacgatactgga ccctgttactgtcagaataatagcacgtatgaggagcagacagatgaaaatatgagcaatgatctgggaacttttgaagg caataaaaagactgagatcatcaaacagcaaaatcatttcaaagatcaggtgttgaagcctcaatttgcaaatagcagcc tcaaacaaatggagagaacaggcagttttaaagaccaggaagtttttgaaagcaggaaatcaagccccaaacaggctagt tctaagaaacattgggaaagagccagcatttcatgctcatcttacacacagagaaaactgaagccaagtaggtcacatgt ccaaagaccagcaacaggcaagaagttaataaggaagagcagttataactctgagagccgtccatcttcagggacacaac gtaggctgcagtatgaaaacactcctcaaggttataacaaattaaacatgaaaagtgactgcagtctcacaccatggctg ctgcttcctgatgaattgtggctttgtatcttttccctgctgactcataaagatatttctcggatttcccaggtctgtca tcacttttatcaactagctggagataagtccttttggaagaagattcagcttaaagattgccactgcttgaatgatgatt ggttgattagtttaggaaaacaccaccctgaatgtttcactcttgatcattgccatgataaaaatcagagaatttctgag gttgggctaaaacaattcttccagtactgtgaaggatatcttaaggaactgaatataaaaaactgcagtggttctggata taaaggggacagcgttctacttcacgcaagcaccttttgccataacttggcagttgtagatataagttggacaggagcta ctgattttggactcaattccctggttaaaggttgtagcagtttacagtgtttttctgctaatggatgccagattaccaat gagtcagtaatggccttgattggaaaacatggaaaaagccttaagaaactggaaatatttggttgtcaagccattactga caaatgcttgaaatcaattactactaaatgtccaggtctagaggttttgaatattggcagacttcatagaatctctcagg actgtttagtgcaaatggtaaattcattgcaaaaacttgctagcctcaatgtcacaggccttgaaatgatgagggattct ctagtacattgtattttgaagaagtgtcctaaactggattgtttggttcttaactcgtgtgctcacataaccgacatcag tctacttgaaattagctcttatctgccaggtatcaggtaccttgatgttaatggatgtaaagatgtgagtgatattggag ttcaagttttggcaaggaattgccataaactttcttatcttgatttgagttccacagcaacaagcaaaagaggggtttgc ttgttggctaatttctgctttaatagcttagagtgtctgaagcttaattactgcaagaatatctctctagatgcagttgc aaaactatgtaaaaactgcaaaagactgagaatgcttcacttatatggttgccgctttatacctgatttggaatccatta caaaagttaataaaactgttaaaatatttcataacctgacaattggaactgtgaaattgttaactgaatgagaactctgc caaatctttcagcagttgctaatgaatagttcagagttttactatgtttttatgtggttaaaatgtagaaagtattatcc aatacttcctatttgtgatactttgtcatctgtggaatagtcaaaatgaagaaaatcttgttagagctgttttcaagata tatttccagtttatttgatgatataactaccatcaccaaatttaaatgacacgatgttctcagaagatctaacctctcta gatattggacatttaaattagagctgcattctgactgatatctctttttaaaccaatacctacgtaatatattttggaac aaaaccttcttttgcttttttatgctgagagctctgccttcactgcttgcactatggctcataaaaataaatcgtctttt gttgaatgctttt |
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Protein
| Protein ID | habu1_s1250_g04349.t1 |
|---|---|
| Definition | - |
>habu1_s1250_g04349.t1 MAGNISTGEKQMEYLSQNILYPSVGNTVHEISVSFTPISSYGKIVPYSADNNNSIQSRSCLLNFTTDTKMGFEEPNETVN GKKPSTIGNLPEVTSLRKEGTARATAGLAERKCLKNTCISGSDNELHRECSIPEIQKLKHVNWTELFLDQSPIGDSIQES NQPVWDHCILKKMVQSNRGKDGINKKPDTFDPKLLYANILKSSVAFENNSENFEQETPGTLVTNNTSCPASIISNSSQSA KHKNENYFWAPLSDSSDEEWTENNLKWTTMDSKNYKSANFDNPTIMKYFSSSMPEDEFTFKIMLDSYEEWNSGMETLDIQ KYKCKSFTQTPKYEDFSRRRNSIKSNHEKSTNENIHFHFKSTVEKDMLRDQVLDIPPLERASDQRNESKLQQTLEMDKIF KGRKNKQEVNFNKNSCDTYQKDAELISPLEYSVMQIKSSSESSLLKPSENNTYKVNNTYKEDSDSLNHKSMNKSNSDCIL LARPHQIRDDQVVHKPCIVSKNEQSSINDNISATGLKSAFGAEEFLTATVKGDGHEKPLCSNTFPLDFSHNDGILAKYYF YLNYLNKSKRFRGENAHRFFFCQEHDLFKEAYDTGPCYCQNNSTYEEQTDENMSNDLGTFEGNKKTEIIKQQNHFKDQVL KPQFANSSLKQMERTGSFKDQEVFESRKSSPKQASSKKHWERASISCSSYTQRKLKPSRSHVQRPATGKKLIRKSSYNSE SRPSSGTQRRLQYENTPQGYNKLNMKSDCSLTPWLLLPDELWLCIFSLLTHKDISRISQVCHHFYQLAGDKSFWKKIQLK DCHCLNDDWLISLGKHHPECFTLDHCHDKNQRISEVGLKQFFQYCEGYLKELNIKNCSGSGYKGDSVLLHASTFCHNLAV VDISWTGATDFGLNSLVKGCSSLQCFSANGCQITNESVMALIGKHGKSLKKLEIFGCQAITDKCLKSITTKCPGLEVLNI GRLHRISQDCLVQMVNSLQKLASLNVTGLEMMRDSLVHCILKKCPKLDCLVLNSCAHITDISLLEISSYLPGIRYLDVNG CKDVSDIGVQVLARNCHKLSYLDLSSTATSKRGVCLLANFCFNSLECLKLNYCKNISLDAVAKLCKNCKRLRMLHLYGCR FIPDLESITKVNKTVKIFHNLTIGTVKLLTE |
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