Gene
| Gene Model ID | habu1_s1250_g04352 |
|---|---|
| Locus | habu1_scaffold1250 : 452612 ... 476634 : - |
| To GenomeBrowser | habu1_scaffold1250:452612..476634 |
| Genes list of scaffold | habu1_scaffold1250 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1250_g04352.t1 | 1 | 1 | ubiquitin | 114 | 162 | 8.8e-13 | 47.4 | 7.3e-16 | 1.5e-12 | 46.6 |
| habu1_s1250_g04352.t1 | 1 | 1 | UBA | 615 | 650 | 6.5e-07 | 29.0 | 8.0e-10 | 1.7e-06 | 27.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s1250_g04352.t1 | gi|602637259|ref|XP_007425478.1| | PREDICTED: ubiquilin-1, partial [Python bivittatus] | 0.0 |
| habu1_s1250_g04352.t1 | gi|727030399|ref|XP_010402054.1| | PREDICTED: ubiquilin-1 [Corvus cornix cornix] | 0.0 |
| habu1_s1250_g04352.t1 | gi|327263526|ref|XP_003216570.1| | PREDICTED: ubiquilin-1 [Anolis carolinensis] | 0.0 |
| habu1_s1250_g04352.t1 | gi|525029160|ref|XP_005061986.1| | PREDICTED: ubiquilin-1 isoform X1 [Ficedula albicollis] | 0.0 |
| habu1_s1250_g04352.t1 | gi|612038745|ref|XP_007498980.1| | PREDICTED: ubiquilin-1 isoform X1 [Monodelphis domestica] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 7.2 |
| Venom grand-1 | 5.5 |
| Pit, infrared sensing | 6.6 |
| Nose | 7.8 |
| Brain-1 | 6.1 |
| Eye | 7.2 |
| fetal fibroblast | 13.7 |
| venom gland-2 | 10.5 |
| Brain-2 | 5.3 |
| Spleen | 5.5 |
| Lung | 3.5 |
| Liver | 11.2 |
| Kidney | 8.8 |
| Pancreas | 5.6 |
| Small intestine | 5.0 |
| Large intestine | 4.0 |
| Stomach | 4.4 |
| heart | 5.7 |
| ovary | 22.2 |
| cheek muscle | 9.5 |
Transcript
| Transcript ID | habu1_s1250_g04352.t1 |
|---|---|
| Definition | - |
>habu1_s1250_g04352.t1 accacagccaggcctcccacatcccgacacctgttgcacctctgcttgacttctgcggctgcttgctgccacttgtgact gaccgccatctggcacattgtgccgttgccactcctccccgcaggacgccgcatggcgcttcgggacgcttccactgctc gcatgttttgggctgcttccactgcgcagcgcttcgcgccgcttctgttgcttgtgtgctttgggccgcttttgttgctc gctgcaggaggccatgtggcgatttgggccatttctgctgcagaaatggcccaaagagccatgcagcgtcctgccacaag cagcagaaatggcacaaagcactgggaggagtggcaacggtgcaatgcgccacatggcatccagccgcaagtggcagcaa gcggccgcagaagaagtcaagcagcggcacgacaggtgtcggggtgtgggaggcctggctgtggtggtcctaagtttaag gaagaaatctccaagcgctttaaggctcactctgaccaacttgtgttgatatttgctggaaaaatcttaaaagatcaaga tacattaacccaacatggaattcatgatggacttactgttcaccttgtcatcaagacacaaaacagatcacatgataatt cagctcaacaaacaagtacttcagagagtactgctaccacaacagcaccaaccaatagtacctctacaaatccaacaaat accagcccatttggtttaggtggtcttggaggacttgcaagtctgagtagcctaggtctgagtacctcaaacttctcaga attacaaagtcaaatgcagcgacagctcatgtccaatccagaaatgatggttcagattatggagaatcccttcgttcaaa gcatgctttcaaatccagacctaatgcgacaattaattatggccaatcctcaaatgcagcaactgatacagagaaatcca gaaatcagtcatatgctcaataaccctgatattatgcgacagactttggaacttgctagaaaccctgcaatgatgcaaga aatgatgagaaatcaggatcgtgccttgagtaatcttgaaagtatacctggtggctataatgctttgagacgaatgtaca cagatatacaggagccgatgctgaacgcagcacaggagcagtttgggggaaatccatttgcttcattagtgagcaattca tcaggtggggacagccagccatctcgcacagaaaaccgagaccctttaccaaatccttgggctcctcaagctaccacaca gagctctccaaacagcagcagtagcaacagtggagatagtggaggaggcagtagtgttgaaagcagcagcactggaacca caggacaaagctcagcagtgccaaatttgggacctgggctaggagctggtatgttcaacacacctggcatgcagagcttg ttgcagcaaattacagaaaacccacagttgatgcagaacatgttgtctgcgccttacatgagaagcatgatgcagtcatt gagccagaatcctgatcttgcagcccagatgatgttgaataaccctttgtttgctggcaatcctcagctacaagaacaaa tgagacaacaaattccaactttccttcaacaaatgcagaacccagatactttatctgcaatgtcaaatcctagagcgatg caggctttgcttcagattcagcaaggtttacagactctagcaacagaagctccaggccttatacctgggtttaatactgg tatagctggactaggaaattctggtttaggaagtgctggattagggaatactgctattcctaccgcaacaacagtgccca cttcaattgcaaatgaaaatacaaacccagcttcaggaactggtgaaactggacaccagcagtttgttcaacagatgtta caggcccttgctggagcaaatgctcagcaactacaaaatcctgaaatcagatttcagcagcaactggagcagctcagcgc aatgggcttcttgaaccgtgaagccaacttacaagctctaatagcaacaggaggtgacatcaatgcagccattgaaaggc tactgggttcccagccatcatagcaacgtttctgaaacttgaaaaatatatgaagaacttgtcggatggcataataaaat atatcatggaaatgcgtgataattttaagcatattcagaatgtttctaatcttcaaacaacatgcccgcattgggataca tcaagtaacaatgttttgctaataattccaccacaagagggcacactttatgtaagtctaagtctgcaatgctttgaaca taacatcggtagctatctttgaaggagttcaataatctcagcattctacagtaatgcattttaacagaaaagcaacattt catcttcaaagctgtagctttatgactacaagttgtaacatttgtgattctccatctatcctgtgatataataatctttg taacaattattacagctgccaatatctggaacaaaaggttagaaaaaaagtcatttccttccaatagcaggccacctgtg gaattaagaccaaaactttctggtttattctagatttatgtgaacaacaaactataattgttgatttggctcagttaaca tagtgctgccttttcccttttagctatacctatttaacctgtttccttttttcaaaacaacgtatcgtaactggtatttc cagtctcttttatctcctgttactctaattaaaagtcacagctatgacacttgctgtgggccattactttgagcaacact ctttctgttggaggtaataaagcacaaattcaccatgtattatattgtgaagttttgacttgcagtatatttttcttggt gtgataacatattattgtagtaagcaagcattgaataagacaaaagcgtctcaagttgtttggttttggcagatatgcca gaaattttcaatcatcacgaagtgggttctattatgtggatcataattcagttacatatcatgctataagggtggtgaaa tgtcagtagttttagaaaacccatggttgaagggtcatctgcaaggtcgctgtactgttggatatctgttgcataaagtc acctgtattccaagttggactctgactgtgaagcagattctatgtggatgattgaagcttcaaatggcttggttatctgg gaggagtttgaacttattaggtatgataaagtggataaagttgcttagtgaccggtcaatgttacaatactcgctggggg tacttaacaacccaattccaatgatctctctcacacactgcagtcacatggctgcattttgggcactttgcaatgggctc acatttatggccatttgcagcctcccacggtcacacgattgttttatggcatttctgccaaaaacctggcatttctaatt ttagaaaaaattggctcatagcaaacaatggactcgcttaatggctggcataaaataggtcagtcacatggataacccat tttacaactatcatgacttatgacagtacaggctatattgcagtcataagtcaaggaatacctgtagggttttttgacta caggtagcgctggattatatatatatggaggtaggagcaataaatggatataggggaacataggaaattaaatataatat aaagcactctagcaaaaaactagatattcattaaaagggtgtgtggcacggttatctgattaattttaagtgtggctgtg cagaacttgacaacatgttgtgacaggtttggtatctgagacttgcagggaggtataaaattgtcctgtgtctcctagtt ttttatgcaataatggtgaaaagaggctagtacaaatacctgtagaataggcagtggaaaagtgcatgttctgtggttcc tacatatccagagtcatgggccttgtttctctgggtagggatcatcttgaattggccttcaaggacaaatgagagatggg tgtgccagagtaaaggccctctgatggttaggtacttcaagatgacttaagcacgccttaggagagtaagtattaacaat agtaattgggaccaggaattccatcactaagcaacggagtcataaagtacaaaaagtcttatgattacactgatggttgc atccattacaacagtagttaagcagttccagttgttatgcacaatgtcatgtaattgccatttgccacctgccacttccc cattgactgtcaagtcagcagtgaaagttgcaaatggcaatcatgaccgcagggcactgtgatggccacaacttttgagg actggctgcaagtctcattcagcgccttcataacttcaaatgttaacggaatgaattgatattgactgaagtctacctac actagctcaaccacctgtatatttagaactatatcctgggaggtgatgtgattggattttaaccattgttaattctttga gagaaggggtgatgtcattgtccctttaaaagggaaggttttcagggaagtttgtagagaagattaacagaagcaaatta tcttttagttgggattcagatctgggcatgagaccgagtatcctgttttaggttttaaacatacacgcacagttgttagg tgagaatagaaatttactcaaggctgagtagataaaacagcagacaaggaaaggagtgtaaaaccaaacagtctctggga aaggaagcttgtctaggtacttttgctttcaacaggaatacacagaagaggttgaaatccagtccagagttcagatagcc aaatcagatttgtcacctagttccaaagtcaagagttttaggattttatatgaccagaattcacaggaatgacaaaacag aacgggagatcagttaattgtttccaacagaataatatggttcacaactgcctcttaaatcaggctgccactagctagct atgtttaattaggatagtaacattttttgtttttttgcaaggacccttattgagtgattttgctctattctccaggcaaa gtctttggacttgcaaagtccaagggcttggaggcagaattttgtctaattgttctggtagtgcatcagtctcaggtgat tcctgacttggtgtctcctgatgctgatattccactgattcagttggagctgctctttcagagtagagtttgagtcctgc cctttgccagtaaaactgcatggggcttgtagatgacctctgttctgagaaactcccagccagagagaggggaaacctag agcatggaattaacctcaagtccttgagcagctggcaagaggtccagaactgacccccctttaaactccatagaatcttg tgtcacttggctaaggctggcagtctgcagagattcctgtagaataggcagaatatagtaaggcagtgaacttgaacct |
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Protein
| Protein ID | habu1_s1250_g04352.t1 |
|---|---|
| Definition | - |
>habu1_s1250_g04352.t1 MALRDASTARMFWAASTAQRFAPLLLLVCFGPLLLLAAGGHVAIWAISAAEMAQRAMQRPATSSRNGTKHWEEWQRCNAP HGIQPQVAASGRRRSQAAARQVSGCGRPGCGGPKFKEEISKRFKAHSDQLVLIFAGKILKDQDTLTQHGIHDGLTVHLVI KTQNRSHDNSAQQTSTSESTATTTAPTNSTSTNPTNTSPFGLGGLGGLASLSSLGLSTSNFSELQSQMQRQLMSNPEMMV QIMENPFVQSMLSNPDLMRQLIMANPQMQQLIQRNPEISHMLNNPDIMRQTLELARNPAMMQEMMRNQDRALSNLESIPG GYNALRRMYTDIQEPMLNAAQEQFGGNPFASLVSNSSGGDSQPSRTENRDPLPNPWAPQATTQSSPNSSSSNSGDSGGGS SVESSSTGTTGQSSAVPNLGPGLGAGMFNTPGMQSLLQQITENPQLMQNMLSAPYMRSMMQSLSQNPDLAAQMMLNNPLF AGNPQLQEQMRQQIPTFLQQMQNPDTLSAMSNPRAMQALLQIQQGLQTLATEAPGLIPGFNTGIAGLGNSGLGSAGLGNT AIPTATTVPTSIANENTNPASGTGETGHQQFVQQMLQALAGANAQQLQNPEIRFQQQLEQLSAMGFLNREANLQALIATG GDINAAIERLLGSQPS |
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