Gene
| Gene Model ID | habu1_s1250_g04359 |
|---|---|
| Locus | habu1_scaffold1250 : 623080 ... 677504 : - |
| To GenomeBrowser | habu1_scaffold1250:623080..677504 |
| Genes list of scaffold | habu1_scaffold1250 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| solute carrier family 28 member 3 | GO:0005415 GO:0006812 GO:0015851 GO:0016020 GO:1901642 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1250_g04359.t1 | 1 | 1 | Nucleos_tra2_N | 199 | 270 | 1.8e-20 | 73.0 | 3.7e-24 | 1.8e-20 | 73.0 |
| habu1_s1250_g04359.t1 | 1 | 1 | Gate | 279 | 375 | 3.3e-08 | 33.3 | 6.7e-12 | 3.3e-08 | 33.3 |
| habu1_s1250_g04359.t1 | 1 | 1 | Nucleos_tra2_C | 381 | 605 | 0.0 | 250.0 | 0.0 | 0.0 | 245.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s1250_g04359.t1 | gi|602651359|ref|XP_007432064.1| | PREDICTED: solute carrier family 28 member 3 [Python bivittatus] | 0.0 |
| habu1_s1250_g04359.t1 | gi|637261395|ref|XP_003216567.2| | PREDICTED: solute carrier family 28 member 3 [Anolis carolinensis] | 0.0 |
| habu1_s1250_g04359.t1 | gi|591382269|ref|XP_007065665.1| | PREDICTED: solute carrier family 28 member 3 [Chelonia mydas] | 0.0 |
| habu1_s1250_g04359.t1 | gi|558221302|ref|XP_006135944.1| | PREDICTED: solute carrier family 28 member 3 [Pelodiscus sinensis] | 0.0 |
| habu1_s1250_g04359.t1 | gi|641783552|ref|XP_005311936.2| | PREDICTED: solute carrier family 28 member 3 [Chrysemys picta bellii] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 4.3 |
| Venom grand-1 | 0.1 |
| Pit, infrared sensing | 0.9 |
| Nose | 2.3 |
| Brain-1 | 0.0 |
| Eye | 0.3 |
| fetal fibroblast | 0.0 |
| venom gland-2 | 0.0 |
| Brain-2 | 0.0 |
| Spleen | 0.0 |
| Lung | 0.8 |
| Liver | 0.0 |
| Kidney | 0.0 |
| Pancreas | 0.2 |
| Small intestine | 3.7 |
| Large intestine | 0.0 |
| Stomach | 2.7 |
| heart | 0.0 |
| ovary | 0.0 |
| cheek muscle | 0.0 |
Transcript
| Transcript ID | habu1_s1250_g04359.t1 |
|---|---|
| Definition | - |
>habu1_s1250_g04359.t1 gaccggtttggggtcgtggcattaaaaaggttgagaaccactgctctatatgcaatgtaacattgggttacattggtaac cacattgtctatatatggttcaggacatctagacaaggcctgcttaaggtcacatatctgcagaaagtgaaaggtttatg aagtagaggtctcttctcggtgattgtccctacatcatgggtatatgccgttcagagatgcatttgggctccgtttattc ttggcattcaggaaggaattgaaaatctttttacatcagagtttgccagccttgcaaaagctatgtccacagttaaccgc acttcttccaatagctaccagaacccaggatttgaggaagacacggatgattcaaagataaatggtattgcattaagaaa caggaacttagaaagcagtaattctcttcatcctgatgagcatgaggcaaacatcaatattgacagcaagccatatggaa gccaacctgaatcagaagaaaacaagaatcctgggtgcaaggggaaacttgcaaggaaatacgatatggtctttcaattt tgcaggaaacataaaactataatccgatacattatttatggaatactaattacggcttatctggcaatggtgattgcagc ctgcatcttgaattttcacagagccttagcactcttcatcctcactctcctagccattgttttcatctgttgggactttt tcatagccagatatgagggtaaaattgcagagctgctgtctcctttgggaaaatttctgaaagctcagtggttttggttg aaatgggtagtgtggatcatcttaatagttgctgttgtgtgttggttaatttttgatactgccaagcaagggaccaacca gctcatttcctttggtggacttattatgtatattctcttgatgctgatcttctccaagtacccaactaaagttgtatgga gaccagtaatctggggggttgcaatgcagtttgttcttggacttataaccttgaggaccaaagtaggatttgatgcattc cactggcttggtaatcaagttcagattttcttgggatataccgatgctggtgctaaattcgtgtttggtgaaaaatatac tgatcacttctttgccttcaaggtgctgcctattattattttcttcagtacagtgatgtctgtgctataccatgtcggat tcatgcagtggcttattaaaaaggttggatggatcatgcaaattaccttacagacaagtccagtagaatctttagttgca gctggcaatatatttgtgggaatgtcggagtctcctctcatggtaaagccgtatctgccctatgttaccaagtctgaact ccatgctatcatgacagcaggatttgccaccattgctggaagtgttttaggagcatatatttcctttggggtttcacctt cccatttattaactgcttccgtgatgtctgcaccagcagctttagctattgctaaactcttctggcctgagactgaaaat ccccagataaatgcccaacagggtacaaaaatggaaaaaggagaagcaaggaacttgttggaagctgccagccaaggtgc cagtgctgccatccccctggtagccaacattgctgtgaatctgattgccttccttgctttattggccttctttaatgcag tcctgtcttggctggggaacatgtttgactacccacaactaagctttgagatcatctgttcatatctgtttatgccattt tcttttatgatgggagtagattgggaagacagctttattgttggtgggctgcttggttacaaaactttcttcaatgaatt tgttgcttatgaacaccttgcaaccttgattaaactaagaaagaagggaggagaaatgtacatcagtggtgtgaaacagt acctgagtatacgatcagaaacaattgccacttacgcactttgtggatttgcaaattttggttcggtgggcatgatactt ggagcactatcatccttggctcccaccaggaagagagatatcgcagggggagccttcagggccatgattgctggcaccgt ggcctgcttcatgacagcttgtgttgcaggtatattatctgaaaatccatgtacaacattattacaaagcaacctcaatg caaatgacaatagcaccgaaatagttgcctgctgcttaaacctctttaacagtggcaacagttctgcagaggtgttcccg aagtctaacagcggtttaagagccttgcaccaatgttgtcaacttctgggcccatccaaggttaattgcagcttggtcac tccattatcttaaactgttgaataggattcaaattgatggtggatgaacagaaaaaacaagatggaaatgggatgatctt gttgctaatatagacaggggaaaaacgtgttcta |
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Protein
| Protein ID | habu1_s1250_g04359.t1 |
|---|---|
| Definition | - |
>habu1_s1250_g04359.t1 MSTVNRTSSNSYQNPGFEEDTDDSKINGIALRNRNLESSNSLHPDEHEANINIDSKPYGSQPESEENKNPGCKGKLARKY DMVFQFCRKHKTIIRYIIYGILITAYLAMVIAACILNFHRALALFILTLLAIVFICWDFFIARYEGKIAELLSPLGKFLK AQWFWLKWVVWIILIVAVVCWLIFDTAKQGTNQLISFGGLIMYILLMLIFSKYPTKVVWRPVIWGVAMQFVLGLITLRTK VGFDAFHWLGNQVQIFLGYTDAGAKFVFGEKYTDHFFAFKVLPIIIFFSTVMSVLYHVGFMQWLIKKVGWIMQITLQTSP VESLVAAGNIFVGMSESPLMVKPYLPYVTKSELHAIMTAGFATIAGSVLGAYISFGVSPSHLLTASVMSAPAALAIAKLF WPETENPQINAQQGTKMEKGEARNLLEAASQGASAAIPLVANIAVNLIAFLALLAFFNAVLSWLGNMFDYPQLSFEIICS YLFMPFSFMMGVDWEDSFIVGGLLGYKTFFNEFVAYEHLATLIKLRKKGGEMYISGVKQYLSIRSETIATYALCGFANFG SVGMILGALSSLAPTRKRDIAGGAFRAMIAGTVACFMTACVAGILSENPCTTLLQSNLNANDNSTEIVACCLNLFNSGNS SAEVFPKSNSGLRALHQCCQLLGPSKVNCSLVTPLS |
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