Gene
| Gene Model ID | habu1_s12804_g20892 |
|---|---|
| Locus | habu1_scaffold12804 : 318189 ... 339575 : - |
| To GenomeBrowser | habu1_scaffold12804:318189..339575 |
| Genes list of scaffold | habu1_scaffold12804 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s12804_g20892.t1 | 1 | 1 | F-box-like | 23 | 67 | 7.0e-10 | 38.4 | 2.9e-13 | 1.4e-09 | 37.4 |
| habu1_s12804_g20892.t1 | 1 | 1 | F-box | 23 | 59 | 5.3e-08 | 32.3 | 3.1e-11 | 1.5e-07 | 30.8 |
| habu1_s12804_g20892.t1 | 1 | 1 | SPRY | 138 | 258 | 1.2e-15 | 57.6 | 3.8e-19 | 1.9e-15 | 57.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s12804_g20892.t1 | gi|602650210|ref|XP_007431502.1| | PREDICTED: F-box/SPRY domain-containing protein 1 [Python bivittatus] | 0.0 |
| habu1_s12804_g20892.t1 | gi|530633394|ref|XP_005303737.1| | PREDICTED: F-box/SPRY domain-containing protein 1 [Chrysemys picta bellii] | 0.0 |
| habu1_s12804_g20892.t1 | gi|543372698|ref|XP_005529569.1| | PREDICTED: F-box/SPRY domain-containing protein 1 [Pseudopodoces humilis] | 0.0 |
| habu1_s12804_g20892.t1 | gi|729727686|ref|XP_010559591.1| | PREDICTED: F-box/SPRY domain-containing protein 1 [Haliaeetus leucocephalus] | 0.0 |
| habu1_s12804_g20892.t1 | gi|733902917|ref|XP_010714997.1| | PREDICTED: F-box/SPRY domain-containing protein 1, partial [Meleagris gallopavo] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 1.3 |
| Venom grand-1 | 2.2 |
| Pit, infrared sensing | 1.8 |
| Nose | 1.7 |
| Brain-1 | 2.7 |
| Eye | 1.5 |
| fetal fibroblast | 2.0 |
| venom gland-2 | 2.7 |
| Brain-2 | 2.9 |
| Spleen | 0.9 |
| Lung | 1.1 |
| Liver | 2.1 |
| Kidney | 2.3 |
| Pancreas | 2.6 |
| Small intestine | 3.3 |
| Large intestine | 1.4 |
| Stomach | 1.6 |
| heart | 1.3 |
| ovary | 8.9 |
| cheek muscle | 1.7 |
Transcript
| Transcript ID | habu1_s12804_g20892.t1 |
|---|---|
| Definition | - |
>habu1_s12804_g20892.t1 ggccggtggtcaatcgcctgaggctatggcggcagcggcggctgccggcagcggcggagcgccgaactcagccgctgctg cgggcggttggcggcttcccggtagggtactcgagttcgtcttctcctacttggacctccgggagctacggagctgcgcg ttggtgtgtaagctgtggtaccgcgttttgcacggcgacgagaacagcgaggtgtggcgcagcctggcggctcgcaacct cgccgaggaggcgctacgcaacgatatcctctgcaacgtgcccacctacaagggcaaggtacgtgcctttcagcatgctt tcagcactaatgattgttccagaaatgtctatattaagaagaatggatttactttgcaccggaatcccattgctcagagt actgatggagcaaggaccaagattggctttagtgaaggccgtcatgcctgggaagtctggtgggaaggtcctcttggtac agtggcagtaattggaattgctacaaaaagagctcccatgcagtgtcaaggttatgtagccctcctagggagtgatgacc agagctggggctggaatttagtggacaataatttattacataatggagaagtcaatggcagttttccacagtgcaacaat gccccaaaatatcaaataggtgagagaattcgtgttattctggatatggaagacaaaaccttggcttttgagagaggcta tgagttcttaggagttgcatttcgaggactgccaaagacatgtctgtatccagcagtgtctgctgtatatggcaacactg agaaatactgtgaggtagcaagacaagtgttggtacagaatgaacctcccggagttgaatacgttgctccaaacggagtc ctgttgaaatggcattaattactgtgattatctccatatgcatagcttttccggatacaggatgggcaacaaaacccaca acctatcatagtatttgcaaactaaaaaagagaagtgcagattgcaatgggaggagactgagttctgtcctagaagactt gcctgctgggatagaggaactcttcctggattccaatgctatacaaactctttcaaatgcatcttt |
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Protein
| Protein ID | habu1_s12804_g20892.t1 |
|---|---|
| Definition | - |
>habu1_s12804_g20892.t1 MAAAAAAGSGGAPNSAAAAGGWRLPGRVLEFVFSYLDLRELRSCALVCKLWYRVLHGDENSEVWRSLAARNLAEEALRND ILCNVPTYKGKVRAFQHAFSTNDCSRNVYIKKNGFTLHRNPIAQSTDGARTKIGFSEGRHAWEVWWEGPLGTVAVIGIAT KRAPMQCQGYVALLGSDDQSWGWNLVDNNLLHNGEVNGSFPQCNNAPKYQIGERIRVILDMEDKTLAFERGYEFLGVAFR GLPKTCLYPAVSAVYGNTEKYCEVARQVLVQNEPPGVEYVAPNGVLLKWH |
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