Gene
| Gene Model ID | habu1_s12804_g20893 |
|---|---|
| Locus | habu1_scaffold12804 : 339686 ... 348791 : + |
| To GenomeBrowser | habu1_scaffold12804:339686..348791 |
| Genes list of scaffold | habu1_scaffold12804 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s12804_g20893.t1 | 1 | 1 | WD40 | 7 | 38 | 3.6e-11 | 42.4 | 1.3e-06 | 0.019 | 14.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s12804_g20893.t1 | gi|602650196|ref|XP_007431495.1| | PREDICTED: WD repeat-containing protein 53 [Python bivittatus] | 0.0 |
| habu1_s12804_g20893.t1 | gi|327267163|ref|XP_003218372.1| | PREDICTED: WD repeat-containing protein 53 [Anolis carolinensis] | 0.0 |
| habu1_s12804_g20893.t1 | gi|564256236|ref|XP_006267086.1| | PREDICTED: WD repeat-containing protein 53 [Alligator mississippiensis] | 0.0 |
| habu1_s12804_g20893.t1 | gi|557328437|ref|XP_006037148.1| | PREDICTED: WD repeat-containing protein 53 [Alligator sinensis] | 0.0 |
| habu1_s12804_g20893.t1 | gi|558170311|ref|XP_006124898.1| | PREDICTED: WD repeat-containing protein 53 isoform X2 [Pelodiscus sinensis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 1.9 |
| Venom grand-1 | 3.2 |
| Pit, infrared sensing | 1.7 |
| Nose | 2.9 |
| Brain-1 | 1.1 |
| Eye | 2.1 |
| fetal fibroblast | 4.0 |
| venom gland-2 | 5.8 |
| Brain-2 | 1.2 |
| Spleen | 0.9 |
| Lung | 1.2 |
| Liver | 1.3 |
| Kidney | 0.9 |
| Pancreas | 0.9 |
| Small intestine | 1.3 |
| Large intestine | 1.1 |
| Stomach | 1.3 |
| heart | 1.7 |
| ovary | 41.6 |
| cheek muscle | 4.8 |
Transcript
| Transcript ID | habu1_s12804_g20893.t1 |
|---|---|
| Definition | - |
>habu1_s12804_g20893.t1 tcggctgcaaaagtaggaggtgctaccttgccaacgaactcctcgcctgttgccggcaaggagaggcggaaatgaacgcg tttgtttgagagatcttgtttatacggaggcgtcgggaagtactgctcctgattttagattttcgagtacggcagaggcg agaacaatctaggaccttgtgttgaagctggcttcttggacaacacatcttttatttattttattttaatgtcatgcggt aaggagcagggccttgaacgtgagcccggccattttggttgagggcattgctgagcatgagaaaaaggatgctgtcctaa gcgcatgcgcaaaaacttcacctgtcaagggggactactaaacagacccagcagtttttctttgccggaagagagtttgg tatcgggagaaattggttctttgctttgagtctgtcttgagatatgatggcaaagaagtggaccgatggacattcttctt cagtactaagcctaaatgtgagcaaagacggtctgttggcttcaggagcagaaggaggggagctcacaatttggaatgct gaaggaaatccattggaatgtgtacggcttcaaaaagcagatgatgtcactagcgttatattttctcccacttgttctag aagactctatgcttctcatggggaaattattagcctgctggataccaggtgtctcaaggagccagttgaatgtttccatg taaatgaggaagagatcaattgtctttcagtaaatgaaacagacagcttcttggctgctgcagatgattctggagccata aagataattgacttacaaagcaagaagttgagtcgctgcctgcaacgacattcaaatatttgtgcatctactgcatttcg accccagaggccacaaagccttctttcatgtggcctggatatgaagattataatgtggaacttgcaaaaaactcgcccac aatggattatgaacttgcaagaagaagaagcagttgagcaagggattggccaactctttaacccaccattgattcattca ttgtctgtttctccttgtggcaatgtctttggctgtggagctgaagatgctataaaaagctttaagggaaaactgacctt cagcaccagttggattactaggtatatcactgctgtcttttatggaacagaagtcaagagacatttgaaacatacatctc ttattcctgaagatggccaaagagtctttatctctgtgtgtcctaaacaagacattaaacaggtcacaagttgacttttg ctgggaagaattgagaacaagctgcaaactataaagtcacaaaatattgtattagattctggcattcagaaattatcaga gaagtttgacttttggaatacggttctagagcaagatgtgatgtggacatcactgctagaagacaggtttaattctgtgg agataaatctcttctatagctatatctgtgaaactattcagtgcctacattctcaagtggtagaaagtatacctgatctt gccagagtattgcctacactatcatctgttctgaggaggaaagataaaaacaaaagaattaaatcagcat |
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Protein
| Protein ID | habu1_s12804_g20893.t1 |
|---|---|
| Definition | - |
>habu1_s12804_g20893.t1 MMAKKWTDGHSSSVLSLNVSKDGLLASGAEGGELTIWNAEGNPLECVRLQKADDVTSVIFSPTCSRRLYASHGEIISLLD TRCLKEPVECFHVNEEEINCLSVNETDSFLAAADDSGAIKIIDLQSKKLSRCLQRHSNICASTAFRPQRPQSLLSCGLDM KIIMWNLQKTRPQWIMNLQEEEAVEQGIGQLFNPPLIHSLSVSPCGNVFGCGAEDAIKSFKGKLTFSTSWITRYITAVFY GTEVKRHLKHTSLIPEDGQRVFISVCPKQDIKQVTS |
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