Gene
| Gene Model ID | habu1_s12804_g20894 |
|---|---|
| Locus | habu1_scaffold12804 : 351436 ... 361608 : + |
| To GenomeBrowser | habu1_scaffold12804:351436..361608 |
| Genes list of scaffold | habu1_scaffold12804 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| e3 ubiquitin-protein ligase rnf168 | GO:0005515 GO:0006259 GO:0006974 GO:0016874 GO:0033522 GO:0043229 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s12804_g20894.t4 | 1 | 1 | zf-RING_5 | 15 | 56 | 2.6e-06 | 27.0 | 4.0e-09 | 7.3e-06 | 25.6 |
| habu1_s12804_g20894.t4 | 1 | 1 | zf-C3HC4 | 16 | 54 | 9.9e-07 | 28.3 | 1.8e-09 | 3.4e-06 | 26.6 |
| habu1_s12804_g20894.t4 | 1 | 1 | zf-C3HC4_2 | 16 | 54 | 6.8e-06 | 26.0 | 1.0e-08 | 1.9e-05 | 24.6 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 7.2 |
| Venom grand-1 | 13.7 |
| Pit, infrared sensing | 7.5 |
| Nose | 9.0 |
| Brain-1 | 5.2 |
| Eye | 7.4 |
| fetal fibroblast | 15.7 |
| venom gland-2 | 17.1 |
| Brain-2 | 5.1 |
| Spleen | 5.8 |
| Lung | 8.1 |
| Liver | 10.9 |
| Kidney | 7.3 |
| Pancreas | 6.3 |
| Small intestine | 8.5 |
| Large intestine | 6.6 |
| Stomach | 7.1 |
| heart | 10.8 |
| ovary | 91.7 |
| cheek muscle | 45.4 |
Transcript
| Transcript ID | habu1_s12804_g20894.t1 |
|---|---|
| Definition | - |
>habu1_s12804_g20894.t1 gctatgatagaagcggcaagatggcggcgcccggggattctgcggccgcctcagagttgaaatattgaacgggtgaggcg cgcgaaaatacggaataggtatgctgatgatgtattaagagaattgttttcccttcctggactgaacatgccaaaagaat cagagcccccactctccttgtctgactgccattgtaacatatgcatggatatttttgtggaaccagtcacattaccatgc caccatactctttgtaatgcttgtttccaacttactgtggaaaaagcaagtttgtgttgccctttttgtcgccggcgtgt ctcatcttgggcacgatataactctcgcaataacactcttattaacttggagttatgggaaaaaattaagaaacattttc cagaagagtgccaacgcagaattaatggacaggacctagaaaattatttgtatatccctcaaccaatacactgcttaagt aagcctggagaattaaggcaagaatatgaagctgagatcactaaggtggaagcagaacgccatgctcttgagcaagaaga gagaaaagcaagtgaagaatatattcaaagactactagcagaagaggaagaagagcaaagattaacagaagaaagggaaa aaaagatagcagtccagttactatcagatgaagtgttggcacgagaactgagtttcaatttgaacaggtctgctgaagat tctgttaaaaaaagtccactacctggcccatccccttctgattactgcaaaacatcaaaaaacaaatcaagcaattctgg agacattaagaagtatttatctccaaagtcttgtggtttcttttctccaaagttgctatttggaaaattaaaagaagaaa acattgattctctttctgaggaaagtattagagctgaaactcgctttacattggaagatgaagaaataagaaatgatata accatactatcttcagagacaactggagaaggaaaaatgattaaagattcccctttagaatcaacgggttctcatttaaa tatatgtactacatctgagttcaacagtcatggccctgaattgtcatctttttccaggagtcacttaaatgaaccaatag aggaacatattaccaatagagaagatcatgaaactgattttttctcaatgagtagtagttctaataacaatgactttgga aataaaaaatttacagaaagtacatgcttgctgaaacttcagacaaatgacagcactgaagaaatccttatttctttgac atctagcaaccaacaggacagcaaagatataacctgtgaggaaacaaagatgatgggaaactattcaattgaaaataaaa accagagttgctcattgatcactaaagagattccaaagagaaaatctctacctctcactgaatggacagtggattcatct ttgaaagacaaaagaagaagaacttttgtagaaactgaagagaaagagatgaatgatatgcaaaagcaaatatatttgga ggaacaactttataaacgatataaacaggaagaagaagataggtgtctggctttgaaaattcagaaggaaatggacagag aagagaaaacactaaatcgcaaaaaaggctctcctaatgagtatcatttgcgccctacaacatctaagacagttggaaaa tccccagctgttaggaaacactgcaatctcttaaaggcttcaaacagccagacagaaataaatcaacccaaaccacacag acattcccacagtgagaatgagaggccctctagcaaacaccagacaaaaacatctgtaaaaaatgggaatgttcagaatt gtgtcctcaactctgatttaaaggatgtagaattgctgccaatcaaacaaaggacgattatccagatgttcaagaaatct gcaacaaattgaaacattcaccaaaaccattatagattaatagaaaattttggaaaacctgcaaatatttatctcttctg gtattggctgttcccagaattaatgtgttatttgtttcagaaacagtagcacctgttctgtgcctttccctttgaattct gttctttaatacagtcaccatttttctcctgattgcctttccctaaaataagtaaataaaaaataaaaattatttcaagt tgaactgaa |
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| Transcript ID | habu1_s12804_g20894.t2 |
| Definition | - |
>habu1_s12804_g20894.t2 gctatgatagaagcggcaagatggcggcgcccggggattctgcggccgcctcagagttgaaatattgaacggatgctgat gatgtattaagagaattgttttcccttcctggactgaacatgccaaaagaatcagagcccccactctccttgtctgactg ccattgtaacatatgcatggatatttttgtggaaccagtcacattaccatgccaccatactctttgtaatgcttgtttcc aacttactgtggaaaaagcaagtttgtgttgccctttttgtcgccggcgtgtctcatcttgggcacgatataactctcgc aataacactcttattaacttggagttatgggaaaaaattaagaaacattttccagaagagtgccaacgcagaattaatgg acaggacctagaaaattatttgtatatccctcaaccaatacactgcttaagtaagcctggagaattaaggcaagaatatg aagctgagatcactaaggtggaagcagaacgccatgctcttgagcaagaagagagaaaagcaagtgaagaatatattcaa agactactagcagaagaggaagaagagcaaagattaacagaagaaagggaaaaaaagatagcagtccagttactatcaga tgaagtgttggcacgagaactgagtttcaatttgaacaggtctgctgaagattctgttaaaaaaagtccactacctggcc catccccttctgattactgcaaaacatcaaaaaacaaatcaagcaattctggagacattaagaagtatttatctccaaag tcttgtggtttcttttctccaaagttgctatttggaaaattaaaagaagaaaacattgattctctttctgaggaaagtat tagagctgaaactcgctttacattggaagatgaagaaataagaaatgatataaccatactatcttcagagacaactggag aaggaaaaatgattaaagattcccctttagaatcaacgggttctcatttaaatatatgtactacatctgagttcaacagt catggccctgaattgtcatctttttccaggagtcacttaaatgaaccaatagaggaacatattaccaatagagaagatca tgaaactgattttttctcaatgagtagtagttctaataacaatgactttggaaataaaaaatttacagaaagtacatgct tgctgaaacttcagacaaatgacagcactgaagaaatccttatttctttgacatctagcaaccaacaggacagcaaagat ataacctgtgaggaaacaaagatgatgggaaactattcaattgaaaataaaaaccagagttgctcattgatcactaaaga gattccaaagagaaaatctctacctctcactgaatggacagtggattcatctttgaaagacaaaagaagaagaacttttg tagaaactgaagagaaagagatgaatgatatgcaaaagcaaatatatttggaggaacaactttataaacgatataaacag gaagaagaagataggtgtctggctttgaaaattcagaaggaaatggacagagaagagaaaacactaaatcgcaaaaaagg ctctcctaatgagtatcatttgcgccctacaacatctaagacagttggaaaatccccagctgttaggaaacactgcaatc tcttaaaggcttcaaacagccagacagaaataaatcaacccaaaccacacagacattcccacagtgagaatgagaggccc tctagcaaacaccagacaaaaacatctgtaaaaaatgggaatgttcagaattgtgtcctcaactctgatttaaaggatgt agaattgctgccaatcaaacaaaggacgattatccagatgttcaagaaatctgcaacaaattgaaacattcaccaaaacc attatagattaatagaaaattttggaaaacctgcaaatatttatctcttctggtattggctgttcccagaattaatgtgt tatttgtttcagaaacagtagcacctgttctgtgcctttccctttgaattctgttctttaatacagtcaccatttttctc ctgattgcctttccctaaaataagtaaataaaaaataaaaattatttcaagttgaactgaa |
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| Transcript ID | habu1_s12804_g20894.t3 |
| Definition | - |
>habu1_s12804_g20894.t3 gctatgatagaagcggcaagatggcggcgcccggggattctgcggccgcctcagagttgaaatattgaacggatgctgat gatgtattaagagaattgttttcccttcctggactgaacatgccaaaagaatcagagcccccactctccttgtctgactg ccattgtaacatatgcatggatatttttgtggaaccagtcacattaccatgccaccatactctttgtaatgcttgtttcc aacttactgtggaaaaagcaagtttgtgttgccctttttgtcgccggcgtgtctcatcttgggcacgatataactctcgc aataacactcttattaacttggagttatgggaaaaaattaagaaacattttccagaagagtgccaacgcagaattaatgg acaggacctagaaaattatttgtatatccctcaaccaatacactgcttaagtaagcctggagaattaaggcaagaatatg aagctgagatcactaaggtggaagcagaacgccatgctcttgagcaagaagagagaaaagcaagtgaagaatatattcaa agactactagcagaagaggaagaagagcaaagattaacagaagaaagggaaaaaaagatagcagtccagttactatcaga tgaagtgttggcacgagaactgagtttcaatttgaacaggtctgctgaagattctgttaaaaaaagtccactacctggcc catccccttctgattactgcaaaacatcaaaaaacaaatcaagcaattctggagacattaagaagtatttatctccaaag tcttgtggtttcttttctccaaagttgctatttggaaaattaaaagaagaaaacattgattctctttctgaggaaagtat tagagctgaaactcgctttacattggaagatgaagaaataagaaatgatataaccatactatcttcagagacaactggag aaggaaaaatgattaaagattcccctttagaatcaacgggttctcatttaaatatatgtactacatctgagttcaacagt catggccctgaattgtcatctttttccaggagtcacttaaatgaaccaatagaggaacatattaccaatagagaagatca tgaaactgattttttctcaatgagtagtagttctaataacaatgactttggaaataaaaaatttacagaaagtacatgct tgctgaaacttcagacaaatgacagcactgaagaaatccttatttctttgacatctagcaaccaacaggacagcaaagat ataacctgtgaggaaacaaagatgatgggaaactattcaattgaaaataaaaaccagagttgctcattgatcactaaaga gattccaaagagaaaatctctacctctcactgaatggacagtggattcatctttgaaagacaaaagaagaagaacttttg tagaaactgaagagaaagagatgaatgatatgcaaaagcaaatatatttggaggaacaactttataaacgatataaacag gaagaagaagataggtgtctggctttgaaaattcagaaggaaatggacagagaagagaaaacactaaatcgcaaaaaagg ctctcctaatgagtatcatttgcgccctacaacatctaagacagttggaaaatccccagctgatgtagaattgctgccaa tcaaacaaaggacgattatccagatgttcaagaaatctgcaacaaattgaaacattcaccaaaaccattatagattaata gaaaattttggaaaacctgcaaatatttatctcttctggtattggctgttcccagaattaatgtgttatttgtttcagaa acagtagcacctgttctgtgcctttccctttgaattctgttctttaatacagtcaccatttttctcctgattgcctttcc ctaaaataagtaaataaaaaataaaaattatttcaagttgaactgaa |
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| Transcript ID | habu1_s12804_g20894.t4 |
| Definition | - |
>habu1_s12804_g20894.t4 gctatgatagaagcggcaagatggcggcgcccggggattctgcggccgcctcagagttgaaatattgaacggatgctgat gatgtattaagagaattgttttcccttcctggactgaacatgccaaaagaatcagagcccccactctccttgtctgactg ccattgtaacatatgcatggatatttttgtggaaccagtcacattaccatgccaccatactctttgtaatgcttgtttcc aacttactgtggaaaaagcaagtttgtgttgccctttttgtcgccggcgtgtctcatcttgggcacgatataactctcgc aataacactcttattaacttggagttatgggaaaaaattaagaaacattttccagaagagtgccaacgcagaattaatgg acaggacctagaaaattatttgtatatccctcaaccaatacactgcttaagtaagcctggagaattaaggcaagaatatg aagctgagatcactaaggtggaagcagaacgccatgctcttgagcaagaagagagaaaagcaagtgaagaatatattcaa agactactagcagaagaggaagaagagcaaagattaacagaagaaagggaaaaaaagatagcagtccagttactatcaga tgaagtgttggcacgagaactgagtttcaatttggagtatcagaacaggtctgctgaagattctgttaaaaaaagtccac tacctggcccatccccttctgattactgcaaaacatcaaaaaacaaatcaagcaattctggagacattaagaagtattta tctccaaagtcttgtggtttcttttctccaaagttgctatttggaaaattaaaagaagaaaacattgattctctttctga ggaaagtattagagctgaaactcgctttacattggaagatgaagaaataagaaatgatataaccatactatcttcagaga caactggagaaggaaaaatgattaaagattcccctttagaatcaacgggttctcatttaaatatatgtactacatctgag ttcaacagtcatggccctgaattgtcatctttttccaggagtcacttaaatgaaccaatagaggaacatattaccaatag agaagatcatgaaactgattttttctcaatgagtagtagttctaataacaatgactttggaaataaaaaatttacagaaa gtacatgcttgctgaaacttcagacaaatgacagcactgaagaaatccttatttctttgacatctagcaaccaacaggac agcaaagatataacctgtgaggaaacaaagatgatgggaaactattcaattgaaaataaaaaccagagttgctcattgat cactaaagagattccaaagagaaaatctctacctctcactgaatggacagtggattcatctttgaaagacaaaagaagaa gaacttttgtagaaactgaagagaaagagatgaatgatatgcaaaagcaaatatatttggaggaacaactttataaacga tataaacaggaagaagaagataggtgtctggctttgaaaattcagaaggaaatggacagagaagagaaaacactaaatcg caaaaaaggctctcctaatgagtatcatttgcgccctacaacatctaagacagttggaaaatccccagctgttaggaaac actgcaatctcttaaaggcttcaaacagccagacagaaataaatcaacccaaaccacacagacattcccacagtgagaat gagaggccctctagcaaacaccagacaaaaacatctgtaaaaaatgggaatgttcagaattgtgtcctcaactctgattt aaaggatgtagaattgctgccaatcaaacaaaggacgattatccagatgttcaagaaatctgcaacaaattgaaacattc accaaaaccattatagattaatagaaaattttggaaaacctgcaaatatttatctcttctggtattggctgttcccagaa ttaatgtgttatttgtttcagaaacagtagcacctgttctgtgcctttccctttgaattctgttctttaatacagtcacc atttttctcctgattgcctttccctaaaataagtaaataaaaaataaaaattatttcaagttgaactgaa |
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Protein
| Protein ID | habu1_s12804_g20894.t1 |
|---|---|
| Definition | - |
>habu1_s12804_g20894.t1 MPKESEPPLSLSDCHCNICMDIFVEPVTLPCHHTLCNACFQLTVEKASLCCPFCRRRVSSWARYNSRNNTLINLELWEKI KKHFPEECQRRINGQDLENYLYIPQPIHCLSKPGELRQEYEAEITKVEAERHALEQEERKASEEYIQRLLAEEEEEQRLT EEREKKIAVQLLSDEVLARELSFNLNRSAEDSVKKSPLPGPSPSDYCKTSKNKSSNSGDIKKYLSPKSCGFFSPKLLFGK LKEENIDSLSEESIRAETRFTLEDEEIRNDITILSSETTGEGKMIKDSPLESTGSHLNICTTSEFNSHGPELSSFSRSHL NEPIEEHITNREDHETDFFSMSSSSNNNDFGNKKFTESTCLLKLQTNDSTEEILISLTSSNQQDSKDITCEETKMMGNYS IENKNQSCSLITKEIPKRKSLPLTEWTVDSSLKDKRRRTFVETEEKEMNDMQKQIYLEEQLYKRYKQEEEDRCLALKIQK EMDREEKTLNRKKGSPNEYHLRPTTSKTVGKSPAVRKHCNLLKASNSQTEINQPKPHRHSHSENERPSSKHQTKTSVKNG NVQNCVLNSDLKDVELLPIKQRTIIQMFKKSATN |
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| Protein ID | habu1_s12804_g20894.t2 |
| Definition | - |
>habu1_s12804_g20894.t2 MPKESEPPLSLSDCHCNICMDIFVEPVTLPCHHTLCNACFQLTVEKASLCCPFCRRRVSSWARYNSRNNTLINLELWEKI KKHFPEECQRRINGQDLENYLYIPQPIHCLSKPGELRQEYEAEITKVEAERHALEQEERKASEEYIQRLLAEEEEEQRLT EEREKKIAVQLLSDEVLARELSFNLNRSAEDSVKKSPLPGPSPSDYCKTSKNKSSNSGDIKKYLSPKSCGFFSPKLLFGK LKEENIDSLSEESIRAETRFTLEDEEIRNDITILSSETTGEGKMIKDSPLESTGSHLNICTTSEFNSHGPELSSFSRSHL NEPIEEHITNREDHETDFFSMSSSSNNNDFGNKKFTESTCLLKLQTNDSTEEILISLTSSNQQDSKDITCEETKMMGNYS IENKNQSCSLITKEIPKRKSLPLTEWTVDSSLKDKRRRTFVETEEKEMNDMQKQIYLEEQLYKRYKQEEEDRCLALKIQK EMDREEKTLNRKKGSPNEYHLRPTTSKTVGKSPAVRKHCNLLKASNSQTEINQPKPHRHSHSENERPSSKHQTKTSVKNG NVQNCVLNSDLKDVELLPIKQRTIIQMFKKSATN |
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| Protein ID | habu1_s12804_g20894.t3 |
| Definition | - |
>habu1_s12804_g20894.t3 MPKESEPPLSLSDCHCNICMDIFVEPVTLPCHHTLCNACFQLTVEKASLCCPFCRRRVSSWARYNSRNNTLINLELWEKI KKHFPEECQRRINGQDLENYLYIPQPIHCLSKPGELRQEYEAEITKVEAERHALEQEERKASEEYIQRLLAEEEEEQRLT EEREKKIAVQLLSDEVLARELSFNLNRSAEDSVKKSPLPGPSPSDYCKTSKNKSSNSGDIKKYLSPKSCGFFSPKLLFGK LKEENIDSLSEESIRAETRFTLEDEEIRNDITILSSETTGEGKMIKDSPLESTGSHLNICTTSEFNSHGPELSSFSRSHL NEPIEEHITNREDHETDFFSMSSSSNNNDFGNKKFTESTCLLKLQTNDSTEEILISLTSSNQQDSKDITCEETKMMGNYS IENKNQSCSLITKEIPKRKSLPLTEWTVDSSLKDKRRRTFVETEEKEMNDMQKQIYLEEQLYKRYKQEEEDRCLALKIQK EMDREEKTLNRKKGSPNEYHLRPTTSKTVGKSPADVELLPIKQRTIIQMFKKSATN |
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| Protein ID | habu1_s12804_g20894.t4 |
| Definition | - |
>habu1_s12804_g20894.t4 MPKESEPPLSLSDCHCNICMDIFVEPVTLPCHHTLCNACFQLTVEKASLCCPFCRRRVSSWARYNSRNNTLINLELWEKI KKHFPEECQRRINGQDLENYLYIPQPIHCLSKPGELRQEYEAEITKVEAERHALEQEERKASEEYIQRLLAEEEEEQRLT EEREKKIAVQLLSDEVLARELSFNLEYQNRSAEDSVKKSPLPGPSPSDYCKTSKNKSSNSGDIKKYLSPKSCGFFSPKLL FGKLKEENIDSLSEESIRAETRFTLEDEEIRNDITILSSETTGEGKMIKDSPLESTGSHLNICTTSEFNSHGPELSSFSR SHLNEPIEEHITNREDHETDFFSMSSSSNNNDFGNKKFTESTCLLKLQTNDSTEEILISLTSSNQQDSKDITCEETKMMG NYSIENKNQSCSLITKEIPKRKSLPLTEWTVDSSLKDKRRRTFVETEEKEMNDMQKQIYLEEQLYKRYKQEEEDRCLALK IQKEMDREEKTLNRKKGSPNEYHLRPTTSKTVGKSPAVRKHCNLLKASNSQTEINQPKPHRHSHSENERPSSKHQTKTSV KNGNVQNCVLNSDLKDVELLPIKQRTIIQMFKKSATN |
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