Gene
| Gene Model ID | habu1_s12804_g20896 |
|---|---|
| Locus | habu1_scaffold12804 : 398616 ... 414503 : + |
| To GenomeBrowser | habu1_scaffold12804:398616..414503 |
| Genes list of scaffold | habu1_scaffold12804 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| transmembrane 4 l6 family member 19 | GO:0016021 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s12804_g20896.t2 | 1 | 1 | L6_membrane | 1 | 93 | 3.9e-19 | 68.9 | 3.0e-23 | 4.5e-19 | 68.7 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 1.0 |
| Venom grand-1 | 0.5 |
| Pit, infrared sensing | 4.0 |
| Nose | 0.1 |
| Brain-1 | 0.2 |
| Eye | 0.1 |
| fetal fibroblast | 0.1 |
| venom gland-2 | 0.1 |
| Brain-2 | 0.1 |
| Spleen | 0.2 |
| Lung | 1.2 |
| Liver | 1.4 |
| Kidney | 0.7 |
| Pancreas | 0.5 |
| Small intestine | 0.3 |
| Large intestine | 1.0 |
| Stomach | 0.2 |
| heart | 0.5 |
| ovary | 0.2 |
| cheek muscle | 0.1 |
Transcript
| Transcript ID | habu1_s12804_g20896.t1 |
|---|---|
| Definition | - |
>habu1_s12804_g20896.t1 atctagaaaactctatcatctctagcaatactggcagcaactatttgtgggaagaagttctaagcggccctacaactcct ttcatctgcattcagttcatcaaaagactctcttctgcaatgtgcgtgggaacttgtactcggatcctgggtccatgcct ccttatcttaggctttctttccattactgctaatattctcctactctttcccaattgggaatggtgtcacttaagcctgg gtcaaatatccaacagggcaatgctaatgccaggagtgtggggaggaggcctgttgatttttcctgctgcaattcagatc acaggtattggatggaggtggaagtacttcagcagctcaggaacttgctgtaagatgttcctttccattctgctatcagg attggccctcctgggatcagcagcttgttttattctgtctggttcaggcctgacagaggggcccctatgtctctataatt ccacccacaatgataataagatgcaacaatggggctatccgtttcttgaaatggactaccatgtcttcaacaatggggct cagaattacctgtatgatccttccctttggaattcagtttgcatcaagccacagaatattgttggctggaatgtgtattt cttctcttccctcctagtcatcagcatggttgaaatgatcttggctgctctccaaattatcaatggctgttttggatgtg tctgtggcttatgtgaacagaagaaataggcaacatggtttcggaagtgtttttaaccctcagttcatttgtacagatca ggttacaaagatatgtgctaacttgatttacaattatatcttatgtcactgcagcctgcatagctggttcttgcattgtc atgtaaaaacagagatgaagttgacccaacagtgactcccgcccccatcaccaacccactagtgtatctttgtctcccac agaactaatctgtaaacagtcactttcaggacatataccctgaaactgctgtcattatagacattctcacagagttagag agctaagaagttgattttgataagtaagtaatattgtactgtggtgcatatttatacacatatttattgtgtttctgttt acaagaaacccttaactgttatatgtaatcctcttgtttatgtgagtgaatgcaacataagccagaaagtactgtaattt ttctgagatagaggtacaatataaacaggcctgaatagaaaatgctcgctccaaattaaagttaaggcagatcccctgac tttaggggtctacttcacaagtcgtccccaacttctagaagaccaaaacctgggaaacagctttgccctgaagttgaggt tgaaatatctgaaagctgccagggatgagaaatactggcctacactatgtggtcctggatttcaggcactcagagtcatg tatatgaggtgggtggctgcataaagctaacaatctttcccctagaagagtagattgagaagaatgttattattttcaag agagaacactacttagagctgcacaacctatttctcttcctccacgtttttcaaactgtgtcaaaaaggcaattgttcgc attatgatcagactttgtttttattgattgtctccataatagctggtcttattaatggaaactgctgaaacctatgtgct taaataccaaataaagatatttatttttccaatatct |
|
| Transcript ID | habu1_s12804_g20896.t2 |
| Definition | - |
>habu1_s12804_g20896.t2 atctagaaaactctatcatctctagcaatactggcagcaactatttgtgggaagaagttctaagcggccctacaactcct ttcatctgcattcagttcatcaaaagactctcttctgcaatgtgcgtgggaacttgtactcggatcctgggtccatgcct ccttatcttaggctttctttccattactgctaatattctcctactctttcccaattgggaatggtgtcacttaagcctgg gtcaaatatccaacagggcaatgctaatgccaggagtgtggggaggaggcctgttgatttttcctgctgcaattcagatc acaggtattggatggaggtggaagtacttcagcagctcaggaacttgctgtaagatgttcctttccattctgctatcagg attggccctcctgggatcagcagcttgttttattctgtctggttcaggcctgacagaggggcccctatgtctctataatt ccacccacaatgataataagatgcaacaatggggctatccgtttcttgaaatggactaccatgtcttcaacaatggagtg gggatccgaaggttataactggcagattaatgtcaaactgtatgggcaattttacaaaatgtgtggactgccttgtgcgt gcagataaaagttaaggtttaaacgtattaacttctgtaaagtaaatgttttacttctcaaattttgc |
|
Protein
| Protein ID | habu1_s12804_g20896.t1 |
|---|---|
| Definition | - |
>habu1_s12804_g20896.t1 MLMPGVWGGGLLIFPAAIQITGIGWRWKYFSSSGTCCKMFLSILLSGLALLGSAACFILSGSGLTEGPLCLYNSTHNDNK MQQWGYPFLEMDYHVFNNGAQNYLYDPSLWNSVCIKPQNIVGWNVYFFSSLLVISMVEMILAALQIINGCFGCVCGLCEQ KK |
|
| Protein ID | habu1_s12804_g20896.t2 |
| Definition | - |
>habu1_s12804_g20896.t2 MLMPGVWGGGLLIFPAAIQITGIGWRWKYFSSSGTCCKMFLSILLSGLALLGSAACFILSGSGLTEGPLCLYNSTHNDNK MQQWGYPFLEMDYHVFNNGVGIRRL |
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