Gene
| Gene Model ID | habu1_s1301_g04551 |
|---|---|
| Locus | habu1_scaffold1301 : 11957 ... 38245 : - |
| To GenomeBrowser | habu1_scaffold1301:11957..38245 |
| Genes list of scaffold | habu1_scaffold1301 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| abi gene family member 3 isoform x1 | GO:0005737 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1301_g04551.t1 | 1 | 1 | Abi_HHR | 93 | 164 | 3.5e-27 | 94.3 | 1.6e-30 | 6.1e-27 | 93.5 |
| habu1_s1301_g04551.t1 | 1 | 1 | SH3_1 | 289 | 332 | 6.5e-10 | 38.2 | 2.7e-13 | 9.9e-10 | 37.6 |
| habu1_s1301_g04551.t1 | 1 | 1 | SH3_9 | 290 | 337 | 2.3e-13 | 49.4 | 9.2e-17 | 3.4e-13 | 48.9 |
| habu1_s1301_g04551.t1 | 1 | 1 | SH3_2 | 290 | 338 | 4.9e-07 | 29.1 | 2.1e-10 | 7.9e-07 | 28.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s1301_g04551.t1 | gi|602645070|ref|XP_007428977.1| | PREDICTED: ABI gene family member 3 isoform X1 [Python bivittatus] | 0.0 |
| habu1_s1301_g04551.t1 | gi|327275891|ref|XP_003222705.1| | PREDICTED: ABI gene family member 3 isoform X1 [Anolis carolinensis] | 0.0 |
| habu1_s1301_g04551.t1 | gi|637315646|ref|XP_008111713.1| | PREDICTED: ABI gene family member 3 isoform X2 [Anolis carolinensis] | 0.0 |
| habu1_s1301_g04551.t1 | gi|637381462|ref|XP_008123869.1| | PREDICTED: ABI gene family member 3-like [Anolis carolinensis] | 0.0 |
| habu1_s1301_g04551.t1 | gi|602645072|ref|XP_007428978.1| | PREDICTED: ABI gene family member 3 isoform X2 [Python bivittatus] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 3.7 |
| Venom grand-1 | 1.3 |
| Pit, infrared sensing | 3.2 |
| Nose | 1.1 |
| Brain-1 | 0.6 |
| Eye | 1.3 |
| fetal fibroblast | 0.3 |
| venom gland-2 | 0.5 |
| Brain-2 | 0.4 |
| Spleen | 14.1 |
| Lung | 2.0 |
| Liver | 1.9 |
| Kidney | 1.0 |
| Pancreas | 0.1 |
| Small intestine | 1.7 |
| Large intestine | 2.9 |
| Stomach | 1.0 |
| heart | 2.5 |
| ovary | 0.1 |
| cheek muscle | 0.9 |
Transcript
| Transcript ID | habu1_s1301_g04551.t1 |
|---|---|
| Definition | - |
>habu1_s1301_g04551.t1 tcgaggactaaactggtcttaagtcgactacccaaccggtctgtctgctataagaaggaagtggtgaatccagcacaatt aagtggcgacatgtctgagtttcagcagctgatgcaggacgccataccgtctgcaagagatgttctacaacagaactata gcaacctccttaaagtggcagattattgtgacagcaactatgagcaggcacaagacaaacgaaaagccctaaaggaaacc atggctttcacagttcagtcattagccagtgtgacctatcaaatcaatagcctagctagaaacatcctcaaaatatttga cttgcagaccacccatctccaacaagtggaagccaacgtttgttccattgaacaggtgatagaaatgcataaggagaaag tgtcccgccgtgaaattgggatgcttactgtttccaagacatttcctccctatcagaaaatcatctatccaaagaagctt gagcctttacagccctattacaggaaaccactggactttaacactctggatgacattggccatgggattaaggatcaaag cacacagctggtcaaaacagggactctatcaaggcgatcaatcaagtcctcggctgggatgtcacctggaacccctggaa ggagccagaaggtcctggaagcgattctgccaccactcatccccgaatgccaactctcatcagcttcacctttgtcatcc atgagtaatctcccagaagctttgaacagcacaagtatgaaaaggccttctgaaccagatccatcaccacccccaccccc accaccggaagcagatcttgattttccaaattttcctctaccaccacccctggatatctccaactgtggtcacctgaagc ctccttttctgccacctccaccaccccccgagaaattgccatgggctccagacacctatctggagaaagttgtgactctt tacccttatgttcagaagaaggaggatgaactctcatttacagaaggggtcattatttatgtaacacggaaatactcaaa tggctggtgtgagggcgtgacaagtgatgcagagggattgttccccaggaactacactgaacctttgcactgaatgaggc agaatggaagagaaaaaaagacaggaccctaacacaagttttatggagagcatggagtaacctggagtagtccacagcga gataggcggcaaatcaatttaacaagtaaattcatgcacatcctgatttaagttgccaggaaatcagtatttcccctgac ttacttaaactaggctaaaatcaagctaatgaaaggaaggtgtcaagagtactttggacatttccctatgtgggaagaat ccagagaaataaatattttggagaatattaaaaaa |
|
Protein
| Protein ID | habu1_s1301_g04551.t1 |
|---|---|
| Definition | - |
>habu1_s1301_g04551.t1 MSEFQQLMQDAIPSARDVLQQNYSNLLKVADYCDSNYEQAQDKRKALKETMAFTVQSLASVTYQINSLARNILKIFDLQT THLQQVEANVCSIEQVIEMHKEKVSRREIGMLTVSKTFPPYQKIIYPKKLEPLQPYYRKPLDFNTLDDIGHGIKDQSTQL VKTGTLSRRSIKSSAGMSPGTPGRSQKVLEAILPPLIPECQLSSASPLSSMSNLPEALNSTSMKRPSEPDPSPPPPPPPE ADLDFPNFPLPPPLDISNCGHLKPPFLPPPPPPEKLPWAPDTYLEKVVTLYPYVQKKEDELSFTEGVIIYVTRKYSNGWC EGVTSDAEGLFPRNYTEPLH |
|