Gene
| Gene Model ID | habu1_s1301_g04558 |
|---|---|
| Locus | habu1_scaffold1301 : 276750 ... 277805 : - |
| To GenomeBrowser | habu1_scaffold1301:276750..277805 |
| Genes list of scaffold | habu1_scaffold1301 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| adp-ribosylation factor-like | GO:0000166 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1301_g04558.t1 | 1 | 1 | Arf | 14 | 176 | 0.0 | 213.3 | 0.0 | 0.0 | 213.0 |
| habu1_s1301_g04558.t1 | 1 | 1 | SRPRB | 17 | 140 | 6.3e-11 | 41.8 | 7.2e-14 | 8.9e-11 | 41.3 |
| habu1_s1301_g04558.t1 | 1 | 1 | Ras | 18 | 177 | 1.5e-15 | 56.9 | 1.4e-18 | 1.7e-15 | 56.7 |
| habu1_s1301_g04558.t1 | 1 | 1 | Miro | 18 | 129 | 1.3e-10 | 41.7 | 1.5e-13 | 1.9e-10 | 41.2 |
| habu1_s1301_g04558.t1 | 1 | 1 | Gtr1_RagA | 18 | 105 | 2.2e-08 | 33.5 | 2.3e-11 | 2.8e-08 | 33.1 |
| habu1_s1301_g04558.t1 | 1 | 1 | G-alpha | 45 | 129 | 3.8e-10 | 39.0 | 2.4e-10 | 3.0e-07 | 29.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s1301_g04558.t1 | gi|602644214|ref|XP_007428561.1| | PREDICTED: ADP-ribosylation factor-like [Python bivittatus] | 0.0 |
| habu1_s1301_g04558.t1 | gi|557279181|ref|XP_006022633.1| | PREDICTED: ADP-ribosylation factor-like [Alligator sinensis] | 0.0 |
| habu1_s1301_g04558.t1 | gi|148222405|ref|NP_001090326.1| | ADP-ribosylation factor-like 11 [Xenopus laevis] | 0.0 |
| habu1_s1301_g04558.t1 | gi|564263998|ref|XP_006270852.1| | PREDICTED: ADP-ribosylation factor-like [Alligator mississippiensis] | 0.0 |
| habu1_s1301_g04558.t1 | gi|52346116|ref|NP_001005103.1| | ADP-ribosylation factor-like 11 [Xenopus (Silurana) tropicalis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.6 |
| Venom grand-1 | 0.3 |
| Pit, infrared sensing | 0.5 |
| Nose | 1.0 |
| Brain-1 | 0.1 |
| Eye | 0.1 |
| fetal fibroblast | 0.6 |
| venom gland-2 | 0.3 |
| Brain-2 | 0.1 |
| Spleen | 0.2 |
| Lung | 0.6 |
| Liver | 0.0 |
| Kidney | 0.3 |
| Pancreas | 0.2 |
| Small intestine | 0.1 |
| Large intestine | 0.9 |
| Stomach | 6.2 |
| heart | 0.6 |
| ovary | 563.6 |
| cheek muscle | 8.2 |
Transcript
| Transcript ID | habu1_s1301_g04558.t1 |
|---|---|
| Definition | - |
>habu1_s1301_g04558.t1 aataaaggctggctgaatataagattgcaaacatttcctctctgtttcacaccttgcttatgcttaaacgagccatgggg attttactcagccggatttatgatgctttctatgggatggaagcgcgtattctccttctgggtctggatgctgctggcaa aacaactctgctctacaagctgaagctgaatgaaacaatttcaaccattcccactgtgggcttcaatgtagagacagttc aatccttccacaatatcagtttcaccatgtgggatgttggtggacaagagcgcatcaggtccttatggaagcactaccat accaacacagatgggctgattttcatagtggacagtatggactattatcgttttgaagaagctaggctggagttggaggc attactggatgctgacgatttgcgaggggtgcctttgatgctgctagcaaacaaacaagatttgcctgaagcacggtctt ccatggaagtggcagaaaggatgggagtgaggaaaatatcaggacgcaaatggcgtattcagggttgctctgctctaagt ggtgtggggatccctgaggctatggagaaactatcggagatggtcaaggcgtatcgcaaaactaagagaaccatctgagt tcaacatatgaagaatacaaggttttctgcttaactttttcctgtttgcagcagagtcttgcaaaatgcctcttggatcc catttactcctaattgtctacatgagtcatgtgaaaaaacattctttaatgttgggactgattttgaatatagagtaggc tgtaaaactgtgttggactaaataactggactttttaaaaatgcagtttacgtcttcatcttcatactgaatcaagctga gaattccaagacttgaataaatgagactctaataccaacaatggctctttagttatcagaggccaattcttctgctgtat tggtgataattctagttgtattaagaaagtatataccttgcttcatatcatataaaaacttatgtaacaataaatagatt gcatattaaaactggt |
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Protein
| Protein ID | habu1_s1301_g04558.t1 |
|---|---|
| Definition | - |
>habu1_s1301_g04558.t1 MGILLSRIYDAFYGMEARILLLGLDAAGKTTLLYKLKLNETISTIPTVGFNVETVQSFHNISFTMWDVGGQERIRSLWKH YHTNTDGLIFIVDSMDYYRFEEARLELEALLDADDLRGVPLMLLANKQDLPEARSSMEVAERMGVRKISGRKWRIQGCSA LSGVGIPEAMEKLSEMVKAYRKTKRTI |
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