Gene
| Gene Model ID | habu1_s1301_g04559 |
|---|---|
| Locus | habu1_scaffold1301 : 279916 ... 322608 : + |
| To GenomeBrowser | habu1_scaffold1301:279916..322608 |
| Genes list of scaffold | habu1_scaffold1301 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| tubulin polyglutamylase ttll6 isoform x3 | GO:0006464 GO:0007017 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1301_g04559.t1 | 1 | 1 | TTL | 68 | 348 | 0.0 | 293.6 | 0.0 | 0.0 | 292.3 |
| habu1_s1301_g04559.t1 | 1 | 1 | ATPgrasp_YheCD | 300 | 344 | 5.1e-07 | 28.7 | 2.7e-08 | 0.0001 | 21.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s1301_g04559.t1 | gi|637315585|ref|XP_008111701.1| | PREDICTED: tubulin polyglutamylase TTLL6 isoform X2 [Anolis carolinensis] | 0.0 |
| habu1_s1301_g04559.t1 | gi|637315580|ref|XP_008111700.1| | PREDICTED: tubulin polyglutamylase TTLL6 isoform X1 [Anolis carolinensis] | 0.0 |
| habu1_s1301_g04559.t1 | gi|637315589|ref|XP_008111702.1| | PREDICTED: tubulin polyglutamylase TTLL6 isoform X3 [Anolis carolinensis] | 0.0 |
| habu1_s1301_g04559.t1 | gi|602644212|ref|XP_007428560.1| | PREDICTED: tubulin polyglutamylase TTLL6 [Python bivittatus] | 0.0 |
| habu1_s1301_g04559.t1 | gi|530624814|ref|XP_005301959.1| | PREDICTED: LOW QUALITY PROTEIN: tubulin polyglutamylase TTLL6 [Chrysemys picta bellii] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 4.5 |
| Venom grand-1 | 1.2 |
| Pit, infrared sensing | 4.3 |
| Nose | 8.0 |
| Brain-1 | 0.7 |
| Eye | 0.8 |
| fetal fibroblast | 0.1 |
| venom gland-2 | 0.2 |
| Brain-2 | 0.3 |
| Spleen | 0.4 |
| Lung | 2.7 |
| Liver | 0.4 |
| Kidney | 0.7 |
| Pancreas | 0.0 |
| Small intestine | 0.1 |
| Large intestine | 5.0 |
| Stomach | 0.3 |
| heart | 0.1 |
| ovary | 1.8 |
| cheek muscle | 0.1 |
Transcript
| Transcript ID | habu1_s1301_g04559.t1 |
|---|---|
| Definition | - |
>habu1_s1301_g04559.t1 tgcgtctttggcgggagggcgtgcagttatggatgttgactgctttgtttgctccggcgtaggttgcaatgaatatcaaa atgaggatagcagatgagacacaaaaatatgtatttcacaaagagagacaagagtttgaagagttggtgatcaatttggc caactgtaaatatgagagtgtacgtcgggctgccaaaatgtgtgggcttcgggaagcaactgagattgatgaatggacct tgtattggacagattattctgtttctctggatcgggtaatggagatgaaaagttatcagaaaataaatcatttccctggg atgacagaaatctgtaggaaggaccttctagccaggaatatgagcagaatgttaaagcttttccccaaggaattcaactt ctttcccaagacttggtgtcttcctgctgactatggtgaattgcaggcctttgggagatcaaaaaaacataaaacctaca tctgtaaaccagactctggttgtcaaggcaaaggcattttcatcacaaaaactgtaagagatatcaaacctggggaggat atgatctgccagctctatatctcaaagccatttattattgatggtttcaagtttgatcttcggatttatgtgttggtgac atcatgtgatccattacgggtatttgtttatgaggagggacttgcacgttttgcaacatctatgtattcagacccatcac aaagtaatttggacaatgtctgcatgcacctgactaattattcaattaacaagcacagtgctaattttgtacgagatgaa gattctggtagtaagaggaagctgtccacttttaataagtacatggatcaaaatggttatgatacagggcaaatatggaa ggatattgaagatgttgttattaaaacattgatatcagcccatcctgtcctcaagcataattatctcacttgctttccca accataccctgtggagtgcttgttttgagatcctgggatttgacatcttgctggatcgaaaactaaaaccatggttgctt gaggtgaatcattctccaagcttcagtactgattcatggctggataaagaagtgaaagaccaactattatatgacactct ggtattgatcaacctgggagcatgtgataagcgcaaaatcttggaagtagagaaacgacgaggaaaagaaaggcttctca agcagtgccgtaatcgtgaagccagagccgaggaattcaagaactgccaggctatgtggcttcaacaagcagagatctat gaagaaaacaacacaggaggttatcgccgaatatatcccaattctgattctgtcagatatgataggtttttccaacagaa tagttcacttttccaggaaacagcagcttccagagctcgtgaagaatatgcaaggcatcagctgcaggaactacgtctca aacaagaacaaaaagttacattgaaagaaaagaagactgaattcccaggagagtccagtggagaaaaaacaaagattcct aggccaaagaccgtaaatagatcaactatactgccagtctctgtccagactcagatttgtttagaatctggacctgaggc tgctctcctgctagaacatttttcggatgaacaagagcccaagaaagaagtgacttgtgaatcttcaagtatttcctcaa ataacagccctgaaacagacagcccagagtattctgcaaattatccagtgaggccttacacttctgtgcctgatttgaca tggcagaattcatccagcactccagaacaatctaattccaggccagaactgaagaataccattaatagtcaccattctgc aactaatatgaacattaaaacaaaacatcaaccaccaaatggatttacaaaagcatgcagtaaacaaaactcatgtcatc ctgacacacattttccaacaatgagcaaacatcgtgtgaggagcagaactgcaaaagacagaggtgtctgtgaaacgcca actgttaaaaatttccacccatttggtgaaatgtcttttcagtatcatgttggagaaaaagcttcatcacactcagcagt caaggcaatcagaaagaacttttctgagaatggcaagggaaaaacatctttctttatttcagaatttttcagcaaaaatt ttacagcatctgaaaagcaattaaaacaattctgtcaactcccatctcaacactccaccaatcgagcaaaaagtgcttcc cttcccagagaaatcacagggaccagaagtgcttcttgcaagaagccagcaaaatactataatattcacttcagcctgca gaagccaacagttcagcaacacaacttgcaagatttgctggtgatctcacagatgaacagccagaccacaagagctaatg acccaagagtgagaagtagtccctattcttaagggtcataatgaatcctttgcaagcactggatagcattagaacccaaa agaaacagctttctattaaagagaacccagaactatttgaac |
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Protein
| Protein ID | habu1_s1301_g04559.t1 |
|---|---|
| Definition | - |
>habu1_s1301_g04559.t1 MRIADETQKYVFHKERQEFEELVINLANCKYESVRRAAKMCGLREATEIDEWTLYWTDYSVSLDRVMEMKSYQKINHFPG MTEICRKDLLARNMSRMLKLFPKEFNFFPKTWCLPADYGELQAFGRSKKHKTYICKPDSGCQGKGIFITKTVRDIKPGED MICQLYISKPFIIDGFKFDLRIYVLVTSCDPLRVFVYEEGLARFATSMYSDPSQSNLDNVCMHLTNYSINKHSANFVRDE DSGSKRKLSTFNKYMDQNGYDTGQIWKDIEDVVIKTLISAHPVLKHNYLTCFPNHTLWSACFEILGFDILLDRKLKPWLL EVNHSPSFSTDSWLDKEVKDQLLYDTLVLINLGACDKRKILEVEKRRGKERLLKQCRNREARAEEFKNCQAMWLQQAEIY EENNTGGYRRIYPNSDSVRYDRFFQQNSSLFQETAASRAREEYARHQLQELRLKQEQKVTLKEKKTEFPGESSGEKTKIP RPKTVNRSTILPVSVQTQICLESGPEAALLLEHFSDEQEPKKEVTCESSSISSNNSPETDSPEYSANYPVRPYTSVPDLT WQNSSSTPEQSNSRPELKNTINSHHSATNMNIKTKHQPPNGFTKACSKQNSCHPDTHFPTMSKHRVRSRTAKDRGVCETP TVKNFHPFGEMSFQYHVGEKASSHSAVKAIRKNFSENGKGKTSFFISEFFSKNFTASEKQLKQFCQLPSQHSTNRAKSAS LPREITGTRSASCKKPAKYYNIHFSLQKPTVQQHNLQDLLVISQMNSQTTRANDPRVRSSPYS |
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