Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s1301_g04560
Locus habu1_scaffold1301 : 395353 ... 411025 : -
To GenomeBrowser habu1_scaffold1301:395353..411025
Genes list of scaffold habu1_scaffold1301

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 3.0
Venom grand-1 0.7
Pit, infrared sensing 1.5
Nose 1.0
Brain-1 3.2
Eye 3.0
fetal fibroblast 3.1
venom gland-2 0.8
Brain-2 2.7
Spleen 0.9
Lung 1.5
Liver 0.8
Kidney 1.3
Pancreas 0.7
Small intestine 0.9
Large intestine 1.3
Stomach 0.9
heart 2.0
ovary 1.5
cheek muscle 2.2

Transcript
Transcript IDhabu1_s1301_g04560.t1
Definition-
>habu1_s1301_g04560.t1
accatctctccttccagcccttcctcagcttctgcacaggcctccttccctgggcctggaagtgggatcgagggaggaga
gtggagggcagaacccgggaaacctttcggggaaaggaatgccggcgggacctggctcctttgccagcggcatggcactg
gggtgcaatcttggggccgtccctgtactggaaggcttggtgtatggcggatcccgaagctcacatccagacacagatat
tttacaccgccaagcatatgccactccccatcctctgcagggctatgccacaaaccatcacccagcaggtctttctggct
tattcgagactgggctccatcatgccagcagtgccacccccgatgcctctgtcatgaacctcatttctgctctagagtca
cgggcaccacagccaggcccttctgcttcctccctgctctcccagttccgcactccatcctggcaaacagccatgcacac
tccagcgcctgctgagcttttcatctcagggcccctcccaggttctggcaccttcccttcctcatcagcgctctctgctt
accagcatccagcctctttcagtgggcgcagcttcccagtcacatcatccctgacactccaggatgctactttcagccca
acgtccaatggcctgctgtccccccatgatcctctacttcatatcaaatcctctcagcccagtgttccttcgtccctcag
ctttgaccggctgggcagtgcggtattgggtacgggcttgccctctcagagctcagcgtatcgtagtgctcaagaatcag
cttcccgccacctcccctcccagttcaaccttttgtcatcctcactgggaccatctgaccagacgtcccagctctacaac
acctcagtcttctccagttctcctgcctcctccattgagcgggccattccccggcaagatagcgtgatcaaacattacca
gaggccttccagtgcccagccgcagctgcccgctgcccattctctccagcattatctaagctgcgggggcagctaccagc
agatgccccaccgctccagcctctcctgcagtccccttggtgagcagtcccctgccagcagcgaaggctctcagcagcag
aagaccccccagaccacgcggcaagaaccctctcaaagctaccgccccattattcagtctccagggtattctggtaccac
ctcttcttcaaaatccaagagttactcagcctcccgccaaccaccccgttctacagccacgcccaagtgccaaagcaact
acagttcatctacgcccaagcccagctctgtcattgcaagccagtcacaggcctattcgcctggtcagcctcagagtctc
ctttccatgagccaaacgcagagttactctgtcagccagccacaaaatctctcttcagttagccaggcctcacagggctt
cagcagcaaccaagcccaggatctcacaagtgtgagtaaagctcagagttattccaacagtggacaagctcagccaggcc
aagctgggcaaggaggacaaggactgcagacttgtcaaaatcagacttactctcctgagcagctgcaaggcttgtcatct
gttgggtacagtgttcaggctgagccccatgtttctgtcagccagacaccaagctatgtaccagctcattctcaagggat
gcccacagctagcccatcgctgagttacagcaccggccattctccagctatgccagggcacagccagtctatcggctact
cccatgggcagaaccttccagattcaagtccttcccaaatcatccggcctctccagtcacctaccactaaccggccccaa
agtgtggcatcacctggccagtcccagaaatatctcacttctgtactgtctccttcattcatgcagacggctcacacaca
aagctaccagggttcccaaagtgggttagacagagcatcatcttacaataaagccaaggcagactcggacctgctatcat
ctgagagaactgaagatgaagagtttttaatccagcacttgctgcagtcgcaaagcccaccaagggtgcccacagaaggc
atggtagagtgtgaggagagggcagggaaagggatgggctatgagttgagcaagactgaagagcgttaccatttgcagag
tgtgattcggaccaactctaatctggacaaccaaggcctggagatgtccttgcaaagcttaaaggacaaaaagaaaggag
agaggtccaaagagtacccccacacgcgctccactcctgagtctttggccacttctgtggtccattacagccatcaaact
ggctctatagactcttacgggcaagacatgaagaagtcagtggagcagcacctccagagtggccacatggatacaagcag
taaggaaatatctcaggcccattcttatttgcagaagactcctgagcacgcctcccagcctcatcccatggagtcccatg
gattaatggcgggccagcagggtgcaaccctaatgttggattcccctcctgatttgccccctctttccctttctcagcaa
cagcagcagcagcagcagcagcagtcccaactgctccaatcggtgctcactcacacccaaagccagatgcactctcgtgg
gaaggttcgcaccccactggatgtccatcttatggagcctcagcgcatgcatcaagctgaagcgccctcaccacagcttc
aaatgcaggcattggaagcccacctccatcaggcccatgttcgttctcagagcatggaagcacagcttcttgagccgcag
ccgtccccccagctccaaggccaactgcaaacagaaaggatgcagtctgaaggcatggaggtgatgtcccaaggcagcct
ttcccaatcccaagagatccaggacttcttagagcctgagctgagcttggaatcccacctgggacagagtggggcagtgc
agagtcaacagcatctccttcctgattccactttggacccagactctactcaacaagttcctcaaggccaacttgagggc
aaggaccaatttgagagccccagtcctcaaggagccaagcaacggtttgtccccctcacctccatctgtttcccagactc
tttgttacaagatgaagaccgtagcttcttccctggcatggaggacatgttcgccccccctccctgtgcaggggatgagt
tccctaagtcagatgatggcacgcagggaatggaaaggggtgaaggaatgaaagggggaggctatgatatgatgcctggt
ggacaaggctaccagagttactgccaatcggaaagtggggatgggcagcacttgggattagacacagtgtcagtgaaaca
cgagttgccttctacagtcaatacagaacaactgggactgattcagtctggccaacatgggacagctcctgtttcagaat
ccaagtcaggcctgacctcaccgatcttctgttcttccaagcccaagaagctgctgaagacttcttccttccatttgctg
aaaaaacgggaaccacctttccaacctcccaaaaagaactatgcccaggagtatgaatttgaagatgatgaggacaagga
ggatgtcccagctgacatccgtctcaatagccgccgcctgcctgatctgctgcctgacctcatttccagctgccggacaa
accggaccagccttagccccatgggcgacatagacttttgcccaccaaacagcagcctcatggaggggcccaagcggcga
ggccgcaagcctaccaaacctaagcgggagggcccaccccgcccccgtgggaggccccgcatccggcccctgactgaacc
gccccacggtgtgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngtgtggctcatgatggcaccaagaagctccgcggc
cagggaagagggaggggcaagaaagccggagaggagggggttgagccaggcacaggcttggaatccctcaaaccactcaa
ggtaagctgggaatctgaggaggagagagatgcttgtcaggtagcaatgcctagtggtaagaaaggaaattttggaaaga
gcacaggatagaatgaatagtaatagaatattggcttaataaaaagatttcaatggagaatgcaa
Transcript IDhabu1_s1301_g04560.t2
Definition-
>habu1_s1301_g04560.t2
accatctctccttccagcccttcctcagcttctgcacaggcctccttccctgggcctggaagtgggatcgagggaggaga
gtggagggcagaacccgggaaacctttcggggaaaggaatgccggcgggacctggctcctttgccagcggcatggcactg
gggtgcaatcttggggccgtccctgtactggaaggcttggtgtatggcggatcccgaagctcacatccagacacagatat
tttacaccgccaagcatatgccactccccatcctctgcagggctatgccacaaaccatcacccagcaggtctttctggct
tattcgagactgggctccatcatgccagcagtgccacccccgatgcctctgtcatgaacctcatttctgctctagagtca
cgggcaccacagccaggcccttctgcttcctccctgctctcccagttccgcactccatcctggcaaacagccatgcacac
tccagcgcctgctgagcttttcatctcagggcccctcccaggttctggcaccttcccttcctcatcagcgctctctgctt
accagcatccagcctctttcagtgggcgcagcttcccagtcacatcatccctgacactccaggatgctactttcagccca
acgtccaatggcctgctgtccccccatgatcctctacttcatatcaaatcctctcagcccagtgttccttcgtccctcag
ctttgaccggctgggcagtgcggtattgggtacgggcttgccctctcagagctcagcgtatcgtagtgctcaagaatcag
cttcccgccacctcccctcccagttcaaccttttgtcatcctcactgggaccatctgaccagacgtcccagctctacaac
acctcagtcttctccagttctcctgcctcctccattgagcgggccattccccggcaagatagcgtgatcaaacattacca
gaggccttccagtgcccagccgcagctgcccgctgcccattctctccagcattatctaagctgcgggggcagctaccagc
agatgccccaccgctccagcctctcctgcagtccccttggtgagcagtcccctgccagcagcgaaggctctcagcagcag
aagaccccccagaccacgcggcaagaaccctctcaaagctaccgccccattattcagtctccagggtattctggtaccac
ctcttcttcaaaatccaagagttactcagcctcccgccaaccaccccgttctacagccacgcccaagtgccaaagcaact
acagttcatctacgcccaagcccagctctgtcattgcaagccagtcacaggcctattcgcctggtcagcctcagagtctc
ctttccatgagccaaacgcagagttactctgtcagccagccacaaaatctctcttcagttagccaggcctcacagggctt
cagcagcaaccaagcccaggatctcacaagtgtgagtaaagctcagagttattccaacagtggacaagctcagccaggcc
aagctgggcaaggaggacaaggactgcagacttgtcaaaatcagacttactctcctgagcagctgcaaggcttgtcatct
gttgggtacagtgttcaggctgagccccatgtttctgtcagccagacaccaagctatgtaccagctcattctcaagggat
gcccacagctagcccatcgctgagttacagcaccggccattctccagctatgccagggcacagccagtctatcggctact
cccatgggcagaaccttccagattcaagtccttcccaaatcatccggcctctccagtcacctaccactaaccggccccaa
agtgtggcatcacctggccagtcccagaaatatctcacttctgtactgtctccttcattcatgcagacggctcacacaca
aagctaccagggttcccaaagtgggttagacagagcatcatcttacaataaagccaaggcagactcggacctgctatcat
ctgagagaactgaagatgaagagtttttaatccagcacttgctgcagtcgcaaagcccaccaagggtgcccacagaaggc
atggtagagtgtgaggagagggcagggaaagggatgggctatgagttgagcaagactgaagagcgttaccatttgcagag
tgtgattcggaccaactctaatctggacaaccaaggcctggagatgtccttgcaaagcttaaaggacaaaaagaaaggag
agaggtccaaagagtacccccacacgcgctccactcctgagtctttggccacttctgtggtccattacagccatcaaact
ggctctatagactcttacgggcaagacatgaagaagtcagtggagcagcacctccagagtggccacatggatacaagcag
taaggaaatatctcaggcccattcttatttgcagaagactcctgagcacgcctcccagcctcatcccatggagtcccatg
gattaatggcgggccagcagggtgcaaccctaatgttggattcccctcctgatttgccccctctttccctttctcagcaa
cagcagcagcagcagcagcagcagtcccaactgctccaatcggtgctcactcacacccaaagccagatgcactctcgtgg
gaaggttcgcaccccactggatgtccatcttatggagcctcagcgcatgcatcaagctgaagcgccctcaccacagcttc
aaatgcaggcattggaagcccacctccatcaggcccatgttcgttctcagagcatggaagcacagcttcttgagccgcag
ccgtccccccagctccaaggccaactgcaaacagaaaggatgcagtctgaaggcatggaggtgatgtcccaaggcagcct
ttcccaatcccaagagatccaggacttcttagagcctgagctgagcttggaatcccacctgggacagagtggggcagtgc
agagtcaacagcatctccttcctgattccactttggacccagactctactcaacaagttcctcaaggccaacttgagggc
aaggaccaatttgagagccccagtcctcaaggagccaagcaacggtttgtccccctcacctccatctgtttcccagactc
tttgttacaagatgaagaccgtagcttcttccctggcatggaggacatgttcgccccccctccctgtgcaggggatgagt
tccctaagtcagatgatggcacgcagggaatggaaaggggtgaaggaatgaaagggggaggctatgatatgatgcctggt
ggacaaggctaccagagttactgccaatcggaaagtggggatgggcagcacttgggattagacacagtgtcagtgaaaca
cgagttgccttctacagtcaatacagaacaactgggactgattcagtctggccaacatgggacagctcctgtttcagaat
ccaagtcaggcctgacctcaccgatcttctgttcttccaagcccaagaagctgctgaagacttcttccttccatttgctg
aaaaaacgggaaccacctttccaacctcccaaaaagaactatgcccaggagtatgaatttgaagatgatgaggacaagga
ggatgtcccagctgacatccgtctcaatagccgccgcctgcctgatctgctgcctgacctcatttccagctgccggacaa
accggaccagccttagccccatgggcgacatagacttttgcccaccaaacagcagcctcatggaggggcccaagcggcga
ggccgcaagcctaccaaacctaagcgggagggcccaccccgcccccgtgggaggccccgcatccggcccctgactgaacc
gccccacggtgtgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngtgtggctcatgatggcaccaagaagctccgcggc
cagggaagagggaggggcaagaaagccggagaggagggggttgagccaggcacaggc

Protein
Protein IDhabu1_s1301_g04560.t1
Definition-
>habu1_s1301_g04560.t1
MPAGPGSFASGMALGCNLGAVPVLEGLVYGGSRSSHPDTDILHRQAYATPHPLQGYATNHHPAGLSGLFETGLHHASSAT
PDASVMNLISALESRAPQPGPSASSLLSQFRTPSWQTAMHTPAPAELFISGPLPGSGTFPSSSALSAYQHPASFSGRSFP
VTSSLTLQDATFSPTSNGLLSPHDPLLHIKSSQPSVPSSLSFDRLGSAVLGTGLPSQSSAYRSAQESASRHLPSQFNLLS
SSLGPSDQTSQLYNTSVFSSSPASSIERAIPRQDSVIKHYQRPSSAQPQLPAAHSLQHYLSCGGSYQQMPHRSSLSCSPL
GEQSPASSEGSQQQKTPQTTRQEPSQSYRPIIQSPGYSGTTSSSKSKSYSASRQPPRSTATPKCQSNYSSSTPKPSSVIA
SQSQAYSPGQPQSLLSMSQTQSYSVSQPQNLSSVSQASQGFSSNQAQDLTSVSKAQSYSNSGQAQPGQAGQGGQGLQTCQ
NQTYSPEQLQGLSSVGYSVQAEPHVSVSQTPSYVPAHSQGMPTASPSLSYSTGHSPAMPGHSQSIGYSHGQNLPDSSPSQ
IIRPLQSPTTNRPQSVASPGQSQKYLTSVLSPSFMQTAHTQSYQGSQSGLDRASSYNKAKADSDLLSSERTEDEEFLIQH
LLQSQSPPRVPTEGMVECEERAGKGMGYELSKTEERYHLQSVIRTNSNLDNQGLEMSLQSLKDKKKGERSKEYPHTRSTP
ESLATSVVHYSHQTGSIDSYGQDMKKSVEQHLQSGHMDTSSKEISQAHSYLQKTPEHASQPHPMESHGLMAGQQGATLML
DSPPDLPPLSLSQQQQQQQQQQSQLLQSVLTHTQSQMHSRGKVRTPLDVHLMEPQRMHQAEAPSPQLQMQALEAHLHQAH
VRSQSMEAQLLEPQPSPQLQGQLQTERMQSEGMEVMSQGSLSQSQEIQDFLEPELSLESHLGQSGAVQSQQHLLPDSTLD
PDSTQQVPQGQLEGKDQFESPSPQGAKQRFVPLTSICFPDSLLQDEDRSFFPGMEDMFAPPPCAGDEFPKSDDGTQGMER
GEGMKGGGYDMMPGGQGYQSYCQSESGDGQHLGLDTVSVKHELPSTVNTEQLGLIQSGQHGTAPVSESKSGLTSPIFCSS
KPKKLLKTSSFHLLKKREPPFQPPKKNYAQEYEFEDDEDKEDVPADIRLNSRRLPDLLPDLISSCRTNRTSLSPMGDIDF
CPPNSSLMEGPKRRGRKPTKPKREGPPRPRGRPRIRPLTEPPHGVXXXXXXXXXXXCGS
Protein IDhabu1_s1301_g04560.t2
Definition-
>habu1_s1301_g04560.t2
MPAGPGSFASGMALGCNLGAVPVLEGLVYGGSRSSHPDTDILHRQAYATPHPLQGYATNHHPAGLSGLFETGLHHASSAT
PDASVMNLISALESRAPQPGPSASSLLSQFRTPSWQTAMHTPAPAELFISGPLPGSGTFPSSSALSAYQHPASFSGRSFP
VTSSLTLQDATFSPTSNGLLSPHDPLLHIKSSQPSVPSSLSFDRLGSAVLGTGLPSQSSAYRSAQESASRHLPSQFNLLS
SSLGPSDQTSQLYNTSVFSSSPASSIERAIPRQDSVIKHYQRPSSAQPQLPAAHSLQHYLSCGGSYQQMPHRSSLSCSPL
GEQSPASSEGSQQQKTPQTTRQEPSQSYRPIIQSPGYSGTTSSSKSKSYSASRQPPRSTATPKCQSNYSSSTPKPSSVIA
SQSQAYSPGQPQSLLSMSQTQSYSVSQPQNLSSVSQASQGFSSNQAQDLTSVSKAQSYSNSGQAQPGQAGQGGQGLQTCQ
NQTYSPEQLQGLSSVGYSVQAEPHVSVSQTPSYVPAHSQGMPTASPSLSYSTGHSPAMPGHSQSIGYSHGQNLPDSSPSQ
IIRPLQSPTTNRPQSVASPGQSQKYLTSVLSPSFMQTAHTQSYQGSQSGLDRASSYNKAKADSDLLSSERTEDEEFLIQH
LLQSQSPPRVPTEGMVECEERAGKGMGYELSKTEERYHLQSVIRTNSNLDNQGLEMSLQSLKDKKKGERSKEYPHTRSTP
ESLATSVVHYSHQTGSIDSYGQDMKKSVEQHLQSGHMDTSSKEISQAHSYLQKTPEHASQPHPMESHGLMAGQQGATLML
DSPPDLPPLSLSQQQQQQQQQQSQLLQSVLTHTQSQMHSRGKVRTPLDVHLMEPQRMHQAEAPSPQLQMQALEAHLHQAH
VRSQSMEAQLLEPQPSPQLQGQLQTERMQSEGMEVMSQGSLSQSQEIQDFLEPELSLESHLGQSGAVQSQQHLLPDSTLD
PDSTQQVPQGQLEGKDQFESPSPQGAKQRFVPLTSICFPDSLLQDEDRSFFPGMEDMFAPPPCAGDEFPKSDDGTQGMER
GEGMKGGGYDMMPGGQGYQSYCQSESGDGQHLGLDTVSVKHELPSTVNTEQLGLIQSGQHGTAPVSESKSGLTSPIFCSS
KPKKLLKTSSFHLLKKREPPFQPPKKNYAQEYEFEDDEDKEDVPADIRLNSRRLPDLLPDLISSCRTNRTSLSPMGDIDF
CPPNSSLMEGPKRRGRKPTKPKREGPPRPRGRPRIRPLTEPPHGVXXXXXXXXXXXCGS

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