Gene
| Gene Model ID | habu1_s1301_g04561 |
|---|---|
| Locus | habu1_scaffold1301 : 418282 ... 446965 : - |
| To GenomeBrowser | habu1_scaffold1301:418282..446965 |
| Genes list of scaffold | habu1_scaffold1301 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| transmembrane gamma-carboxyglutamic acid protein 2 | GO:0005509 GO:0005576 GO:0016021 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1301_g04561.t1 | 1 | 1 | rve | 4 | 67 | 7.5e-14 | 51.8 | 5.7e-17 | 1.4e-13 | 50.9 |
| habu1_s1301_g04561.t1 | 1 | 1 | Gla | 217 | 255 | 2.7e-15 | 55.7 | 2.4e-18 | 5.9e-15 | 54.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s1301_g04561.t1 | gi|602634650|ref|XP_007424196.1| | PREDICTED: transmembrane gamma-carboxyglutamic acid protein 2 [Python bivittatus] | 0.0 |
| habu1_s1301_g04561.t1 | gi|637316297|ref|XP_008111826.1| | PREDICTED: transmembrane gamma-carboxyglutamic acid protein 2 isoform X1 [Anolis carolinensis] | 0.0 |
| habu1_s1301_g04561.t1 | gi|55742320|ref|NP_001006771.1| | transmembrane gamma-carboxyglutamic acid protein 2 precursor [Xenopus (Silurana) tropicalis] | 0.0 |
| habu1_s1301_g04561.t1 | gi|89271925|emb|CAJ81684.1| | novel protein containing Vitamin K-dependent carboxylation/gamma-carboxyglutamic (GLA) domain [Xenopus (Silurana) tropicalis] | 0.0 |
| habu1_s1301_g04561.t1 | gi|557258540|ref|XP_006014964.1| | PREDICTED: transmembrane gamma-carboxyglutamic acid protein 2 [Alligator sinensis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 3.8 |
| Venom grand-1 | 1.9 |
| Pit, infrared sensing | 1.1 |
| Nose | 3.6 |
| Brain-1 | 0.1 |
| Eye | 1.1 |
| fetal fibroblast | 0.1 |
| venom gland-2 | 4.0 |
| Brain-2 | 0.0 |
| Spleen | 1.3 |
| Lung | 2.0 |
| Liver | 19.7 |
| Kidney | 7.5 |
| Pancreas | 2.3 |
| Small intestine | 11.1 |
| Large intestine | 2.5 |
| Stomach | 3.2 |
| heart | 0.1 |
| ovary | 0.6 |
| cheek muscle | 0.1 |
Transcript
| Transcript ID | habu1_s1301_g04561.t1 |
|---|---|
| Definition | - |
>habu1_s1301_g04561.t1 cctggttgtaggagtgagtaataaagagcttattgttttcaccatgcgtcttcgtcaattgctagcgaaccgaaaacaca acactggcgacgaagatgtcctggtttctgataatggccctcaatttacctcttttgagttccaggcttttcttcaggcc aacttgatccggcatgcgacttctgctcccttccacccatcctccaatggacaggcagagagaatggtgcgcactaccaa agatgctctcaagaaactgacttacggtaactggcatcccaggttagcagatttccttcttgcacaccgcaccacacctt gcacagccacagggaagagccctgcagaactccgctggggtcgccgcctcatcaccaaattggacaggttgcaccccgac tgggtggcttcccaagtgtcacaactgcgggcacctaggagacttcagaaattgctagctaactgcagtacttctaagct attagacacctttggaacaagtttcaaaatgctaggatctaccatgcggagctctttatgtcttcttttcctgttcaaaa ttctagtccctagttttgccgcctctctccatagccaacctgaccagcaacagattgaagaagtgttcctggatgccact tctgcaaacaaattcttgagccgtaagattctttataaccactgggattttgagctgattgtgccagacaacttggagcg tgaatgcaaagaagaagtttgcaactttgaagaagctcgggaagtctttgaagacgactcaaaaacaaaaaaattttggg agacctatccacacaatggaagaggaggagcaagaaatcctggagtagatgtggcaggcctggtgtctggcctgattgca gctttggtgtctattgtcatgtttataattgtggccatgtattgtatcaaataccgtgctaaagagagaaatcgatccag aagaacacaggaaaatttgaatccagggattccccttgccacatttgatgatgagcccaagccggaatctgcacctgggc ttccttcttatgagcaagcaatggcagctccaggagtacacgacgcaccacccccaccgtacaacaggaatagtgtcaat ttgactcggccaacctgagttttcaacagcagcataaatattcttgaaatacctattggtctccttcatctatacaaaag acactatgcacacgcctgcatgacagccaaagcaaggactttgaagcggacaattaatgcatactggatatgaatctgca gtatgaacaggctgtatatgagagtcaggtgtgcagaaaaggatattgcagaatgctttggttgaaaaattaaaatctaa aattgcaaatgcgcat |
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Protein
| Protein ID | habu1_s1301_g04561.t1 |
|---|---|
| Definition | - |
>habu1_s1301_g04561.t1 MRLRQLLANRKHNTGDEDVLVSDNGPQFTSFEFQAFLQANLIRHATSAPFHPSSNGQAERMVRTTKDALKKLTYGNWHPR LADFLLAHRTTPCTATGKSPAELRWGRRLITKLDRLHPDWVASQVSQLRAPRRLQKLLANCSTSKLLDTFGTSFKMLGST MRSSLCLLFLFKILVPSFAASLHSQPDQQQIEEVFLDATSANKFLSRKILYNHWDFELIVPDNLERECKEEVCNFEEARE VFEDDSKTKKFWETYPHNGRGGARNPGVDVAGLVSGLIAALVSIVMFIIVAMYCIKYRAKERNRSRRTQENLNPGIPLAT FDDEPKPESAPGLPSYEQAMAAPGVHDAPPPPYNRNSVNLTRPT |
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