Gene
| Gene Model ID | habu1_s1301_g04564 |
|---|---|
| Locus | habu1_scaffold1301 : 518100 ... 565336 : + |
| To GenomeBrowser | habu1_scaffold1301:518100..565336 |
| Genes list of scaffold | habu1_scaffold1301 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| paired box protein pax-6-like | GO:0005634 GO:0006355 GO:0043565 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1301_g04564.t2 | 1 | 1 | Homeobox | 86 | 141 | 2.0e-23 | 81.7 | 8.0e-27 | 3.9e-23 | 80.8 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.0 |
| Venom grand-1 | 0.0 |
| Pit, infrared sensing | 0.0 |
| Nose | 0.0 |
| Brain-1 | 0.0 |
| Eye | 5.7 |
| fetal fibroblast | 0.0 |
| venom gland-2 | 0.0 |
| Brain-2 | 0.0 |
| Spleen | 0.0 |
| Lung | 0.0 |
| Liver | 0.0 |
| Kidney | 0.0 |
| Pancreas | 0.0 |
| Small intestine | 0.0 |
| Large intestine | 0.0 |
| Stomach | 0.0 |
| heart | 0.0 |
| ovary | 0.0 |
| cheek muscle | 0.0 |
Transcript
| Transcript ID | habu1_s1301_g04564.t1 |
|---|---|
| Definition | - |
>habu1_s1301_g04564.t1 ccgctttgggtgagcaccagaggagagtgggcaaaacttgaggggatgataggatttccaaaatgctgttgcaaagaaag gatgtgtgtttgaaagggagtgttgaacgaaaaggcaagatgctaaagtgttaataggggtgaaagtgttaatagtattg gtgaagatagcatgggagcagggatctaaactgggcatccctcagtgaatgtgtaagagaaaccaggcactcaccaaggc acaacacggtgggcattgtctagagaaagggaagctggaaatcaactttccaaagaaggttggcaaaagcacagaaattc ccccacacaaagtggggaaaggaaaaaaagaactccaaggcagggcacatcaagaagtgccaccaaggaagaaaaattaa aactgggcagcaagaaagttaaacaaaggattgaaaaagttatgccggcacaagacaacttgacttcaagtaaactgatg gatcaaacctacttcatacataactaatttaaccaattactgcctcagcatcacttttactcaagcattgtcctgctctg tttaattgcaaatttcagtatcagaggattccaggtttatccacagcagggtgtgcaactgcagcttgcaaccctccagg tgggggacttctatagactctaccagccttcttcttgtccctctgatcttcagccccattccatggggttggatggcatg tatgagaagagcagaatgctgaatatacaaaacagcacatggagtagtcgtcaggagtggtaccaagacagtttggtgac aggacaactcaaccctgacagctgtcagcagctagaaagtagcttggattctgagcacccccaaggtggtagcaaccaag atctggatgactcccaaatccatttgcagttgaagcgcaaattgcaaagaaacagaacttcatttacgcaggagcaaata gaggcactggagaaagaatttgagcgtactcattaccctgatgtctttgcccgtgaacgcttggcagcaaaaattgatct gcccgaagcccggatccaggtctggttctccaaccgtcgagctaaatggcgtcgggaagagaaactgcggaaccagaggc gtcaagcaggtgctatgctgggccatacagaaagtgtcctcagcaacaactatggttctctcccacctttagcccccttc tccatggccaacaacagcctccctattcagcaggcagtgcccccagttgccagccagtcgtcatcttattcctgcatgct ccctggcagcccgtcagtgcgaagctatgattcatacacaccctcccagctcccctctcacagtctgaatgccagcagtg ggacctctactgggttgatctctccgggagtgtcagttcctgtacaagtcccaggaaaccctgcaggacacagcttcccg ccacaccgcatcgactggggtggggtggggtacggggcagaagagagtgaggtggtgggtgactttaaagggctgcgcgc cgaacctgctgtcatgcggggggaacgcagcaaagacgcaggaggcacaaagggaaaggttggaaagcaaggatgagaat gtgtgactttcccagtgtagctgagctacaaaccatcacaatcccaggcagcatagtctaagtaaaagatgttgaccgat ggaatccaacaacttctggaagggtccaacttttgaaccctatccatccatgcagtttcttcttactggctcatttggga aaacacgatcagaagacagaaagaaaatgtgttttaataagcataacatgcagcaaataggcagaagcggggaatatggt ggtcctgatcctgctgactttaaaagaatacaaataaaaacagagctatttttctttcct |
|
| Transcript ID | habu1_s1301_g04564.t2 |
| Definition | - |
>habu1_s1301_g04564.t2 ccgctttgggtgagcaccagaggagagtgggcaaaacttgaggggatgataggatttccaaaatgctgttgcaaagaaag gatgtgtgtttgaaagggagtgttgaacgaaaaggcaagatgctaaagtgttaataggggtgaaagtgttaatagtattg gtgaagatagcatgggagcagggatctaaactgggcatccctcagtgaatgtgtaagagaaaccaggcactcaccaaggc acaacacggtgggcattgtctagagaaagggaagctggaaatcaactttccaaagaaggttggcaaaagcacagaaattc ccccacacaaagtggggaaaggaaaaaaagaactccaaggcagggcacatcaagaagtgccaccaaggaagaaaaattaa aactgggcagcaagaaagttaaacaaaggattgaaaaagttatgccggcacaagacaacttgacttcaagtaaactgatg gatcaaacctacttcatacataactaatttaaccaattactgcctcagcatcacttttactcaagcattgtcctgctctg tttaattgcaaatttcagtatcagaggattccagatagactcactccaagtgtccagaggcttcccttctggaaaggtat gtaaaagtgacattgtcaaatgtagcattgccttaggacacagattcgttgttctgttgtcacattaggtcaaactagtt tctcatctgcctgtagagtttgtgacttaggaatataaatcaagaaattaaaaaaaatcacattgggagtatcaagtttt taaaaatcatggcaaagagctacagtacaccccattccatggggttggatggcatgtatgagaagagcagaatgctgaat atacaaaacagcacatggagtagtcgtcaggagtggtaccaagacagtttggtgacaggacaactcaaccctgacagctg tcagcagctagaaagtagcttggattctgagcacccccaaggtggtagcaaccaagatctggatgactcccaaatccatt tgcagttgaagcgcaaattgcaaagaaacagaacttcatttacgcaggagcaaatagaggcactggagaaagaatttgag cgtactcattaccctgatgtctttgcccgtgaacgcttggcagcaaaaattgatctgcccgaagcccggatccaggtctg gttctccaaccgtcgagctaaatggcgtcgggaagagaaactgcggaaccagaggcgtcaagcaggtgctatgctgggcc atacagaaagtgtcctcagcaacaactatggttctctcccacctttagcccccttctccatggccaacaacagcctccct attcagcaggcagtgcccccagttgccagccagtcgtcatcttattcctgcatgctccctggcagcccgtcagtgcgaag ctatgattcatacacaccctcccagctcccctctcacagtctgaatgccagcagtgggacctctactgggttgatctctc cgggagtgtcagttcctgtacaagtcccaggaaaccctgcaggacacagcttcccgccacaccgcatcgactggggtggg gtggggtacggggcagaagagagtgaggtggtgggtgactttaaagggctgcgcgccgaacctgctgtcatgcgggggga acgcagcaaagacgcaggaggcacaaagggaaaggttggaaagcaaggatgagaatgtgtgactttcccagtgtagctga gctacaaaccatcacaatcccaggcagcatagtctaagtaaaagatgttgaccgatggaatccaacaacttctggaaggg tccaacttttgaaccctatccatccatgcagtttcttcttactggctcatttgggaaaacacgatcagaagacagaaaga aaatgtgttttaataagcataacatgcagcaaataggcagaagcggggaatatggtggtcctgatcctgctgactttaaa agaatacaaataaaaacagagctatttttctttcct |
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Protein
| Protein ID | habu1_s1301_g04564.t1 |
|---|---|
| Definition | - |
>habu1_s1301_g04564.t1 MGLDGMYEKSRMLNIQNSTWSSRQEWYQDSLVTGQLNPDSCQQLESSLDSEHPQGGSNQDLDDSQIHLQLKRKLQRNRTS FTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQAGAMLGHTESVLSNNYGSL PPLAPFSMANNSLPIQQAVPPVASQSSSYSCMLPGSPSVRSYDSYTPSQLPSHSLNASSGTSTGLISPGVSVPVQVPGNP AGHSFPPHRIDWGGVGYGAEESEVVGDFKGLRAEPAVMRGERSKDAGGTKGKVGKQG |
|
| Protein ID | habu1_s1301_g04564.t2 |
| Definition | - |
>habu1_s1301_g04564.t2 MAKSYSTPHSMGLDGMYEKSRMLNIQNSTWSSRQEWYQDSLVTGQLNPDSCQQLESSLDSEHPQGGSNQDLDDSQIHLQL KRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQAGAMLGHTE SVLSNNYGSLPPLAPFSMANNSLPIQQAVPPVASQSSSYSCMLPGSPSVRSYDSYTPSQLPSHSLNASSGTSTGLISPGV SVPVQVPGNPAGHSFPPHRIDWGGVGYGAEESEVVGDFKGLRAEPAVMRGERSKDAGGTKGKVGKQG |
|