Gene
| Gene Model ID | habu1_s1301_g04565 |
|---|---|
| Locus | habu1_scaffold1301 : 600920 ... 605776 : + |
| To GenomeBrowser | habu1_scaffold1301:600920..605776 |
| Genes list of scaffold | habu1_scaffold1301 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| Adm5, partial [Ophiophagus hannah] | GO:0005179 GO:0005576 GO:0007165 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1301_g04565.t1 | 1 | 1 | Calc_CGRP_IAPP | 110 | 159 | 1.2e-07 | 31.7 | 1.2e-11 | 1.8e-07 | 31.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s1301_g04565.t1 | gi|327275969|ref|XP_003222744.1| | PREDICTED: ADM [Anolis carolinensis] | 0.0 |
| habu1_s1301_g04565.t1 | gi|301610261|ref|XP_002934670.1| | PREDICTED: ADM-like [Xenopus (Silurana) tropicalis] | 1.0e-17 |
| habu1_s1301_g04565.t1 | gi|556961318|ref|XP_005991001.1| | PREDICTED: ADM-like [Latimeria chalumnae] | 2.0e-15 |
| habu1_s1301_g04565.t1 | gi|557258556|ref|XP_006014972.1| | PREDICTED: ADM-like [Alligator sinensis] | 5.0e-12 |
| habu1_s1301_g04565.t1 | gi|74136101|ref|NP_001027913.1| | adrenomedullin-5 precursor [Takifugu rubripes] | 6.0e-08 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 1.3 |
| Venom grand-1 | 1.6 |
| Pit, infrared sensing | 0.7 |
| Nose | 0.6 |
| Brain-1 | 0.0 |
| Eye | 0.2 |
| fetal fibroblast | 0.3 |
| venom gland-2 | 0.7 |
| Brain-2 | 0.1 |
| Spleen | 10.1 |
| Lung | 29.2 |
| Liver | 0.0 |
| Kidney | 0.6 |
| Pancreas | 0.5 |
| Small intestine | 0.2 |
| Large intestine | 0.4 |
| Stomach | 0.1 |
| heart | 0.0 |
| ovary | 0.2 |
| cheek muscle | 0.3 |
Transcript
| Transcript ID | habu1_s1301_g04565.t1 |
|---|---|
| Definition | - |
>habu1_s1301_g04565.t1 tcgacttatgaccggtttagtcctcgacttatgaccggtttagtcctcgacttatgaccggttggggtcgcggcattaaa aagatcagaattatggattcaagaagggttcttctgatgctcatctggttgacatcatgtcagttctggaggacatcagg aatgacagacaggcagcaatcccctcctgctgcttcctttctggaacaattcctgaagattggtggaagagtaaatggta gagccactcaggaatctgatctggaattagaggaaagaccctccacatgggcacaactggtccaagaaagagatcaactg aacttgcttaaaagctctgttcctggacaccgtgtgccccgacagctgttagcttcacctcccgcacgtggatgccacct tggcacttgccagatccagaacctggccaatctactttaccgctatgggggcaataaccaaaaagaagaatcccacaaga acaacaagggaacaaatgatcccatgggctacgggcgtaggaaacgcagggcagctggccatggagtatccagtcccact taaaagatgttctgaagatgagagaaagatgggcacccacatgaatcaggttctggacacctgtaaagatcagagaaaca ggctggatgatcctagcgctcagaggccatgctatgaaacagcagtggacattctgggtgaatatggccatcatctgaga tgtaggctggcaattttcttctgtcttttacctccatctcagtgtagatttggtcctttgtgtcttcctgaaatttaaaa agcatgcagtcttcagagaggctgcttgtttttgctctggcctgagctgttctaatggagtggagttacatttgcatttg cagcagatcacatcaagagcccgctatctactggggtacagaatgcacatgaatatgctctaataagccacagcggcaga tagaaaatgggtttggaatttccagatagataataaaacagcttgatttgtgggatgtt |
|
Protein
| Protein ID | habu1_s1301_g04565.t1 |
|---|---|
| Definition | - |
>habu1_s1301_g04565.t1 MTGWGRGIKKIRIMDSRRVLLMLIWLTSCQFWRTSGMTDRQQSPPAASFLEQFLKIGGRVNGRATQESDLELEERPSTWA QLVQERDQLNLLKSSVPGHRVPRQLLASPPARGCHLGTCQIQNLANLLYRYGGNNQKEESHKNNKGTNDPMGYGRRKRRA AGHGVSSPT |
|