Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s1301_g04568
Locus habu1_scaffold1301 : 670830 ... 697435 : +
To GenomeBrowser habu1_scaffold1301:670830..697435
Genes list of scaffold habu1_scaffold1301

Annotation by Blast2GO
Annotation GO
testis-specific serine kinase substrate isoform x1 GO:0006796

Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
habu1_s1301_g04568.t1 2 1 TSKS 96 197 1.96182e-44 151.8 4.6e-27 2.3e-23 82.2
habu1_s1301_g04568.t1 2 2 TSKS 217 297 1.96182e-44 151.8 4.1e-25 2.0e-21 75.7

Blast Hit to nr / sp
query Subject ID Subject Name evalue
habu1_s1301_g04568.t1 gi|637316224|ref|XP_008111815.1| PREDICTED: testis-specific serine kinase substrate isoform X4 [Anolis carolinensis] 2.0e-35
habu1_s1301_g04568.t1 gi|637316220|ref|XP_008111814.1| PREDICTED: testis-specific serine kinase substrate isoform X3 [Anolis carolinensis] 2.0e-35

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 0.0
Venom grand-1 0.0
Pit, infrared sensing 0.0
Nose 0.0
Brain-1 0.0
Eye 0.0
fetal fibroblast 0.0
venom gland-2 0.1
Brain-2 0.0
Spleen 0.0
Lung 0.0
Liver 0.0
Kidney 0.0
Pancreas 0.0
Small intestine 0.0
Large intestine 0.0
Stomach 0.0
heart 0.0
ovary 0.0
cheek muscle 0.0

Transcript
Transcript IDhabu1_s1301_g04568.t1
Definition-
>habu1_s1301_g04568.t1
acaacaacaacatatactattgagatttgaaacataagacaacaggaaagaagatatgataaaatggactaaaaactttg
gttataatacacaaatggaatgactttaccaatgcttgcaactgatactccatttaaacaatggcagatggatatttcta
aatttatatggcaagagaaaaaagtatcgacccccgaaacagtaatggccaacatggtgaaaaccatctggcaattcaaa
gaaataaatgaggctggagacacgccaacaggaattgagagtcagactcaaggcagcaaggaggagtttggaaagactgc
tagtatctcccaaaagaagaaaggtatccctttccatggaacaggggtgtcaaactgccagatgcgtcatgcggaagccg
cgcccaccccattgccggcaatgccaaaacagtcccgatacgttgcacgacgtcatgtgacgtcagttgagccccatttt
accagtgaaagccctaatctgaacttgaagcgttcttctgcttgtactaatgtttctctcctgaatctaactgatgcgga
acgtgatgattccaccacggagaatgaatccacagatgatgagggcctgccgtggggagcaggggacgaaaaacgggatc
ctctgcttcccatcaagccagcttggtcagaagataaagacgatgcttctagccaacaggagaaactgcataacttgcgg
caacaggttcaagtagaagactttcgttgtacttctctgaggaaatggatgttggagctggcccagaagcaggtggtgcg
gctattggctcagctgggggtacgcttggagggagtgcttccccagcgggaaaggacacaagtggaacaaggtcaagcac
tcaggatgctgcgggaggaactggatgacgtttctgccacggcaaagcaggcatcagtgtctctcactcaggtccagtca
gacctggatggactcctggaagacatatcccggcatcttggaaacactgaagaatatggaagcatctgaccgacctcctt
ctaattgtgctagagatgttccagctatagcattgtgaatacagaggtgctgcaaaagatgtttgagcatgcgatggcac
ctgttttggaggagctgaagcagcgggcccaatcagaaggcatatgccccagatgccagacgatggcatagcgaggcaga
gtagaccaagggtgtcaaatcaggaaactgcacccaccccattgctggcaatggggaaaaagctccgatacgttgcgcgg
catcacgtgatgtcacaaacttgacatgtctggagtagactaactccagacctccagacctcaataaaatgtttccagag
tgcaaccttt

Protein
Protein IDhabu1_s1301_g04568.t1
Definition-
>habu1_s1301_g04568.t1
MLATDTPFKQWQMDISKFIWQEKKVSTPETVMANMVKTIWQFKEINEAGDTPTGIESQTQGSKEEFGKTASISQKKKGIP
FHGTGVSNCQMRHAEAAPTPLPAMPKQSRYVARRHVTSVEPHFTSESPNLNLKRSSACTNVSLLNLTDAERDDSTTENES
TDDEGLPWGAGDEKRDPLLPIKPAWSEDKDDASSQQEKLHNLRQQVQVEDFRCTSLRKWMLELAQKQVVRLLAQLGVRLE
GVLPQRERTQVEQGQALRMLREELDDVSATAKQASVSLTQVQSDLDGLLEDISRHLGNTEEYGSI

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