Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s1301_g04571
Locus habu1_scaffold1301 : 779862 ... 792509 : -
To GenomeBrowser habu1_scaffold1301:779862..792509
Genes list of scaffold habu1_scaffold1301

Annotation by Blast2GO
Annotation GO
metalloreductase steap1 GO:0005768 GO:0005886

Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
habu1_s1301_g04571.t3 1 1 Ferric_reduct 111 257 4.7e-16 59.0 6.4e-20 4.7e-16 59.0

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 5.6
Venom grand-1 0.5
Pit, infrared sensing 3.7
Nose 1.7
Brain-1 1.2
Eye 1.0
fetal fibroblast 6.3
venom gland-2 0.3
Brain-2 1.3
Spleen 0.5
Lung 0.4
Liver 0.2
Kidney 1.2
Pancreas 0.0
Small intestine 0.2
Large intestine 0.9
Stomach 0.5
heart 0.4
ovary 13.4
cheek muscle 0.8

Transcript
Transcript IDhabu1_s1301_g04571.t1
Definition-
>habu1_s1301_g04571.t1
ccggctcccgaaagcggaaaaaaaagtcgtaagttcagagcgttcggtcgctgaattttcccgagcaccaaaacggagcc
aactccaattctatgagagggcagcccatccacagctcctgagaggcaaacacaccgctcaccaaatatctgccgagcca
tagacatccattattggtcaaagaacatgaatcaggatgaaaatgagaaaatgaattctgaaataacacaggaggttttc
ggcaatgcgattatggacttacaagctcctggcattcctgaagaaattgtgttctctcacatgcatcaaagaacccatat
agatgagtttgagtcttctcccaataagtactgcaaatatatttttcctaaatggcatttaccagtgaaaacagcattaa
tactctctttttttgtatttacttatacttttctaagagacatcatccatccttttgtcactgctctagaaaatgtattt
tataaaattccaatcttggtcataaacaaagtcttacccgtggtatcaattactcttctggccttggtttatttacctgg
aatattagctgctggcttccaattccattatggaactaagtatagacgttttccaccatggttagacagatggatgttat
caagaaaacagtttgggcttctgagcttcttttttgcttccatgcatgcctgttacagtttgtgctatccactgaggaga
tcgtacagatacaaactcttaaactgggcatatcagcaggtacagaaaaaaaaggaaaatgcctggattgaacatgatgt
ctggagaatggagatttatgtatctctaggaattctggcacttgctttgctggctgtgttggcagtaacatcaattccat
ctgtcagctactcattgacttggagagagtttcattatattcagagcaagattggatatttagcattgctgctttgtact
attcatgcactagtatttgcatgggataaatggattgatccacaccagtacttatggtatactccacccacgtttataat
agcagttattctcccgattgtagttctgacttgtaaagttatcctgctgttcccatgctttaggaagagactacagaaga
tcagatctggttgtgatattgtgacaaatgagacacagatcacttccaaactgtagattcactgaccttttccaaatcct
aaacaaaacaatttatacatatagttgcacttctttctacaggtgcatggagtaaacctcattagacttgttgaggttta
cttctgaagatgtatctaggatcaaactacacaatggaaaaatccacctacttttttatatttcagttttactgagaaat
gcagagagtgtgcctctgatcgaattatacaaattctataaggaattcattaaaaaaacaaaatttcaatttcttattca
gaactttcttcaggaatattgtggacgtataatatttatatacttgaaatatgcattgtattgcaatctaaaatgtgcag
gataatacatagactaaaaagtataatgtgaacaatgagccatcgttgccttagtgttataatgactgaaactcagtaga
gtagacacagtacattcttttacccacaatctctcattacacataggaaaccccattaaataaatcaaagatttgtatat
tcatctaagtgcatgttcagaacaactaatgcaatcagttatataaaatacttttaaaaacaacttttgtagaagatgtc
attatattggactacggaatatagcatatgaatttgttgtcagaaaatagatgtctaatgtgagtaaaaacagaactaga
aaaggaatgaatttatccaccagcatttggtgttttaacatattattctatacctggagattccaagataatttgtagta
cttgaaaaagagatgcatgaatcttttaaagccactttaggtttggcatgtttggcatatttggtttatgtaactcttgt
cagttgtgagcactactagttatgttagtttgctgatgcaagagccaaacaactgcagaaaatgcagctttggtcctaac
aatatagttaacttatgactgaaagaagtttgggcatggattgatctggcatttctcaacttttatgttttttggaggaa
tgatttccatctgcaaagttgaggtctaattagtaaggatgattattctgaaatctggagaatattctcattttcttttc
attatgttcttaaaattatattgtgaattgaacaatgtaaatataaatttatgtaaaagtagttattagtatactttttg
taagaatgtatgcaatataataaaactttatttcattttttcaaccttcatattccagtggttttatgttaaatagaagt
taagtgattgttctacagtagccttttaagaaaagatgtgctggaagtttgtacccagagggaaatacacaataggaaac
agtttcctccctgaaaatctcatcatgtgaatctaacataggactattgaataaaaataatgtataaggtaccataattt
ttcatggcaataataccaataaaacagcagtggaattaaattaaccatgaaacaagttgtca
Transcript IDhabu1_s1301_g04571.t2
Definition-
>habu1_s1301_g04571.t2
ccggctcccgaaagcggaaaaaaaagtcacatccattattggtcaaagaacatgaatcaggatgaaaatgagaaaatgaa
ttctgaaataacacaggaggttttcggcaatgcggtaatttttatatttttaagttacctgttctaaattgtccttggat
ggtgctttggtgccccatccccaattttttctgggggatggtggtatatagagcagttatttatcaatacttggtaaata
atggtaaagaagcaaaagtttttgattccaaatggactcgcggtagaagctgagattatggacttacaagctcctggcat
tcctgaagaaattgtgttctctcacatgcatcaaagaacccatatagatgagtttgagtcttctcccaataagtactgca
aatatatttttcctaaatggcatttaccagtgaaaacagcattaatactctctttttttgtatttacttatacttttcta
agagacatcatccatccttttgtcactgctctagaaaatgtattttataaaattccaatcttggtcataaacaaagtctt
acccgtggtatcaattactcttctggccttggtttatttacctggaatattagctgctggcttccaattccattatggaa
ctaagtatagacgttttccaccatggttagacagatggatgttatcaagaaaacagtttgggcttctgagcttctttttt
gcttccatgcatgcctgttacagtttgtgctatccactgaggagatcgtacagatacaaactcttaaactgggcatatca
gcaggtacagaaaaaaaaggaaaatgcctggattgaacatgatgtctggagaatggagatttatgtatctctaggaattc
tggcacttgctttgctggctgtgttggcagtaacatcaattccatctgtcagctactcattgacttggagagagtttcat
tatattcagagcaagattggatatttagcattgctgctttgtactattcatgcactagtatttgcatgggataaatggat
tgatccacaccagtacttatggtatactccacccacgtttataatagcagttattctcccgattgtagttctgacttgta
aagttatcctgctgttcccatgctttaggaagagactacagaagatcagatctggttgtgatattgtgacaaatgagaca
cagatcacttccaaactgtagattcactgaccttttccaaatcctaaacaaaacaatttatacatatagttgcacttctt
tctacaggtgcatggagtaaacctcattagacttgttgaggtttacttctgaagatgtatctaggatcaaactacacaat
ggaaaaatccacctacttttttatatttcagttttactgagaaatgcagagagtgtgcctctgatcgaattatacaaatt
ctataaggaattcattaaaaaaacaaaatttcaatttcttattcagaactttcttcaggaatattgtggacgtataatat
ttatatacttgaaatatgcattgtattgcaatctaaaatgtgcaggataatacatagactaaaaagtataatgtgaacaa
tgagccatcgttgccttagtgttataatgactgaaactcagtagagtagacacagtacattcttttacccacaatctctc
attacacataggaaaccccattaaataaatcaaagatttgtatattcatctaagtgcatgttcagaacaactaatgcaat
cagttatataaaatacttttaaaaacaacttttgtagaagatgtcattatattggactacggaatatagcatatgaattt
gttgtcagaaaatagatgtctaatgtgagtaaaaacagaactagaaaaggaatgaatttatccaccagcatttggtgttt
taacatattattctatacctggagattccaagataatttgtagtacttgaaaaagagatgcatgaatcttttaaagccac
tttaggtttggcatgtttggcatatttggtttatgtaactcttgtcagttgtgagcactactagttatgttagtttgctg
atgcaagagccaaacaactgcagaaaatgcagctttggtcctaacaatatagttaacttatgactgaaagaagtttgggc
atggattgatctggcatttctcaacttttatgttttttggaggaatgatttccatctgcaaagttgaggtctaattagta
aggatgattattctgaaatctggagaatattctcattttcttttcattatgttcttaaaattatattgtgaattgaacaa
tgtaaatataaatttatgtaaaagtagttattagtatactttttgtaagaatgtatgcaatataataaaactttatttca
ttttttcaaccttcatattccagtggttttatgttaaatagaagttaagtgattgttctacagtagccttttaagaaaag
atgtgctggaagtttgtacccagagggaaatacacaataggaaacagtttcctccctgaaaatctcatcatgtgaatcta
acataggactattgaataaaaataatgtataaggtaccataatttttcatggcaataataccaataaaacagcagtggaa
ttaaattaaccatgaaacaagttgtca
Transcript IDhabu1_s1301_g04571.t3
Definition-
>habu1_s1301_g04571.t3
ccggctcccgaaagcggaaaaaaaagtcacatccattattggtcaaagaacatgaatcaggatgaaaatgagaaaatgaa
ttctgaaataacacaggaggttttcggcaatgcgattatggacttacaagctcctggcattcctgaagaaattgtgttct
ctcacatgcatcaaagaacccatatagatgagtttgagtcttctcccaataagtactgcaaatatatttttcctaaatgg
catttaccagtgaaaacagcattaatactctctttttttgtatttacttatacttttctaagagacatcatccatccttt
tgtcactgctctagaaaatgtattttataaaattccaatcttggtcataaacaaagtcttacccgtggtatcaattactc
ttctggccttggtttatttacctggaatattagctgctggcttccaattccattatggaactaagtatagacgttttcca
ccatggttagacagatggatgttatcaagaaaacagtttgggcttctgagcttcttttttgcttccatgcatgcctgtta
cagtttgtgctatccactgaggagatcgtacagatacaaactcttaaactgggcatatcagcaggtacagaaaaaaaagg
aaaatgcctggattgaacatgatgtctggagaatggagatttatgtatctctaggaattctggcacttgctttgctggct
gtgttggcagtaacatcaattccatctgtcagctactcattgacttggagagagtttcattatattcagagcaagattgg
atatttagcattgctgctttgtactattcatgcactagtatttgcatgggataaatggattgatccacaccagtacttat
ggtatactccacccacgtttataatagcagttattctcccgattgtagttctgacttgtaaagttatcctgctgttccca
tgctttaggaagagactacagaagatcagatctggttgtgatattgtgacaaatgagacacagatcacttccaaactgta
gattcactgaccttttccaaatcctaaacaaaacaatttatacatatagttgcacttctttctacaggtgcatggagtaa
acctcattagacttgttgaggtttacttctgaagatgtatctaggatcaaactacacaatggaaaaatccacctactttt
ttatatttcagttttactgagaaatgcagagagtgtgcctctgatcgaattatacaaattctataaggaattcattaaaa
aaacaaaatttcaatttcttattcagaactttcttcaggaatattgtggacgtataatatttatatacttgaaatatgca
ttgtattgcaatctaaaatgtgcaggataatacatagactaaaaagtataatgtgaacaatgagccatcgttgccttagt
gttataatgactgaaactcagtagagtagacacagtacattcttttacccacaatctctcattacacataggaaacccca
ttaaataaatcaaagatttgtatattcatctaagtgcatgttcagaacaactaatgcaatcagttatataaaatactttt
aaaaacaacttttgtagaagatgtcattatattggactacggaatatagcatatgaatttgttgtcagaaaatagatgtc
taatgtgagtaaaaacagaactagaaaaggaatgaatttatccaccagcatttggtgttttaacatattattctatacct
ggagattccaagataatttgtagtacttgaaaaagagatgcatgaatcttttaaagccactttaggtttggcatgtttgg
catatttggtttatgtaactcttgtcagttgtgagcactactagttatgttagtttgctgatgcaagagccaaacaactg
cagaaaatgcagctttggtcctaacaatatagttaacttatgactgaaagaagtttgggcatggattgatctggcatttc
tcaacttttatgttttttggaggaatgatttccatctgcaaagttgaggtctaattagtaaggatgattattctgaaatc
tggagaatattctcattttcttttcattatgttcttaaaattatattgtgaattgaacaatgtaaatataaatttatgta
aaagtagttattagtatactttttgtaagaatgtatgcaatataataaaactttatttcattttttcaaccttcatattc
cagtggttttatgttaaatagaagttaagtgattgttctacagtagccttttaagaaaagatgtgctggaagtttgtacc
cagagggaaatacacaataggaaacagtttcctccctgaaaatctcatcatgtgaatctaacataggactattgaataaa
aataatgtataaggtaccataatttttcatggcaataataccaataaaacagcagtggaattaaattaaccatgaaacaa
gttgtca

Protein
Protein IDhabu1_s1301_g04571.t1
Definition-
>habu1_s1301_g04571.t1
MNQDENEKMNSEITQEVFGNAIMDLQAPGIPEEIVFSHMHQRTHIDEFESSPNKYCKYIFPKWHLPVKTALILSFFVFTY
TFLRDIIHPFVTALENVFYKIPILVINKVLPVVSITLLALVYLPGILAAGFQFHYGTKYRRFPPWLDRWMLSRKQFGLLS
FFFASMHACYSLCYPLRRSYRYKLLNWAYQQVQKKKENAWIEHDVWRMEIYVSLGILALALLAVLAVTSIPSVSYSLTWR
EFHYIQSKIGYLALLLCTIHALVFAWDKWIDPHQYLWYTPPTFIIAVILPIVVLTCKVILLFPCFRKRLQKIRSGCDIVT
NETQITSKL
Protein IDhabu1_s1301_g04571.t2
Definition-
>habu1_s1301_g04571.t2
MVKKQKFLIPNGLAVEAEIMDLQAPGIPEEIVFSHMHQRTHIDEFESSPNKYCKYIFPKWHLPVKTALILSFFVFTYTFL
RDIIHPFVTALENVFYKIPILVINKVLPVVSITLLALVYLPGILAAGFQFHYGTKYRRFPPWLDRWMLSRKQFGLLSFFF
ASMHACYSLCYPLRRSYRYKLLNWAYQQVQKKKENAWIEHDVWRMEIYVSLGILALALLAVLAVTSIPSVSYSLTWREFH
YIQSKIGYLALLLCTIHALVFAWDKWIDPHQYLWYTPPTFIIAVILPIVVLTCKVILLFPCFRKRLQKIRSGCDIVTNET
QITSKL
Protein IDhabu1_s1301_g04571.t3
Definition-
>habu1_s1301_g04571.t3
MNQDENEKMNSEITQEVFGNAIMDLQAPGIPEEIVFSHMHQRTHIDEFESSPNKYCKYIFPKWHLPVKTALILSFFVFTY
TFLRDIIHPFVTALENVFYKIPILVINKVLPVVSITLLALVYLPGILAAGFQFHYGTKYRRFPPWLDRWMLSRKQFGLLS
FFFASMHACYSLCYPLRRSYRYKLLNWAYQQVQKKKENAWIEHDVWRMEIYVSLGILALALLAVLAVTSIPSVSYSLTWR
EFHYIQSKIGYLALLLCTIHALVFAWDKWIDPHQYLWYTPPTFIIAVILPIVVLTCKVILLFPCFRKRLQKIRSGCDIVT
NETQITSKL

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