Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s13214_g21012
Locus habu1_scaffold13214 : 239110 ... 258755 : -
To GenomeBrowser habu1_scaffold13214:239110..258755
Genes list of scaffold habu1_scaffold13214

Annotation by Blast2GO
Annotation GO
mln64 n-terminal domain homolog GO:0005765

Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
habu1_s13214_g21012.t2 1 1 MENTAL 45 212 0.0 239.5 0.0 0.0 239.2

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 7.2
Venom grand-1 5.0
Pit, infrared sensing 4.6
Nose 3.7
Brain-1 3.9
Eye 4.6
fetal fibroblast 8.7
venom gland-2 8.3
Brain-2 4.1
Spleen 3.5
Lung 3.7
Liver 8.1
Kidney 4.2
Pancreas 4.3
Small intestine 3.0
Large intestine 3.0
Stomach 2.1
heart 4.9
ovary 3.3
cheek muscle 4.3

Transcript
Transcript IDhabu1_s13214_g21012.t1
Definition-
>habu1_s13214_g21012.t1
acccggccagctcctccctcgaggcctccaggcggtgtgttatcgtcgcccaacgggcgtgatcttcgttactgctgggg
ggcacgagaaatcttcagaatggattaatctggtagtaatgttgaagctgaaacaaagctgctgtaaccaaagacaggat
gagttggatatcaggcgatcaaggcagcagtctgggttctcatccttctttaagggatgttcattccatcaacccaacac
agctaatgccaagaattgagtcctatgaaaccagggggaaaaaaggcatttctgatgttcgaaggactttctgtttattt
gtcacatttgacttattgtttataaccttgttgtggataatagaattaaacgtaaatggtggcattgaaaaaacactaga
aaaagaagttctgcattacgactaccatttttcatattttgatatctttctcctggcagtttttcgattcaagattttga
tacttgcatatgcgctgtgcagactacggcactggtgggcaatagcatttacaactgctgtaaccagtgccttgttatta
ataaaagtaattatttcaaagctgttatttcagggtgcttttggctatgtgttacctatcatatctttccttcttgcctg
gatagaaacatggttcttggatttcaaagttttaccacaagaagcagaagaagaaaccagattattgctagtacaggatg
cctctgaacgagctgcccttattcatcctgggctcctttccgatgggcaattttattctcctcctgaatctgaagcagga
tctgatgaagaatctgaagaaaagcaagacagtgaaaaaccagttgtataacaaatatagcaattggagagtgaaaattt
gactgtggagtagcttgaagattcccactcatggaactattttttttattttattttattttatttatttattttcacta
tacaccatacaccaaaaactacataaacataaatcttttcttctaacagaacagt
Transcript IDhabu1_s13214_g21012.t2
Definition-
>habu1_s13214_g21012.t2
acccggccagctcctccctcgaggcctccaggcggtgtgttatcgtcgcccaacgggcgtgatcttcgttactgctgggg
ggcacggtaaggagccacttgaggcggggccacctcgggaagcttggtccgccctcgggaaaagcggagtggttcgtccc
gagaaatcttcagaatggattaatctggtagtaatgttgaagctgaaacaaagctgctgtaaccaaagacaggatgagtt
ggatatcaggcgatcaaggcagcagtctgggttctcatccttctttaagggatgttcattccatcaacccaacacagcta
atgccaagaattgagtcctatgaaaccagggggaaaaaaggcatttctgatgttcgaaggactttctgtttatttgtcac
atttgacttattgtttataaccttgttgtggataatagaattaaacgtaaatggtggcattgaaaaaacactagaaaaag
aagttctgcattacgactaccatttttcatattttgatatctttctcctggcagtttttcgattcaagattttgatactt
gcatatgcgctgtgcagactacggcactggtgggcaatagcatttacaactgctgtaaccagtgccttgttattaataaa
agtaattatttcaaagctgttatttcagggtgcttttggctatgtgttacctatcatatctttccttcttgcctggatag
aaacatggttcttggatttcaaagttttaccacaagaagcagaagaagaaaccagattattgctagtacaggatgcctct
gaacgagctgcccttattcatcctgggctcctttccgatgggcaattttattctcctcctgaatctgaagcaggatctga
tgaagaatctgaagaaaagcaagacagtgaaaaaccagttgtataacaaatatagcaattggagagtgaaaatttgactg
tggagtagcttgaagattcccactcatggaactattttttttattttattttattttatttatttattttcactatacac
catacaccaaaaactacataaacataaatcttttcttctaacagaacagt

Protein
Protein IDhabu1_s13214_g21012.t1
Definition-
>habu1_s13214_g21012.t1
MSWISGDQGSSLGSHPSLRDVHSINPTQLMPRIESYETRGKKGISDVRRTFCLFVTFDLLFITLLWIIELNVNGGIEKTL
EKEVLHYDYHFSYFDIFLLAVFRFKILILAYALCRLRHWWAIAFTTAVTSALLLIKVIISKLLFQGAFGYVLPIISFLLA
WIETWFLDFKVLPQEAEEETRLLLVQDASERAALIHPGLLSDGQFYSPPESEAGSDEESEEKQDSEKPVV
Protein IDhabu1_s13214_g21012.t2
Definition-
>habu1_s13214_g21012.t2
MSWISGDQGSSLGSHPSLRDVHSINPTQLMPRIESYETRGKKGISDVRRTFCLFVTFDLLFITLLWIIELNVNGGIEKTL
EKEVLHYDYHFSYFDIFLLAVFRFKILILAYALCRLRHWWAIAFTTAVTSALLLIKVIISKLLFQGAFGYVLPIISFLLA
WIETWFLDFKVLPQEAEEETRLLLVQDASERAALIHPGLLSDGQFYSPPESEAGSDEESEEKQDSEKPVV

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