Gene
Gene Model ID | habu1_s1341_g04747 |
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Locus | habu1_scaffold1341 : 1 ... 17685 : - |
To GenomeBrowser | habu1_scaffold1341:1..17685 |
Genes list of scaffold | habu1_scaffold1341 |
Annotation by Blast2GO
Annotation | GO |
---|---|
protrudin isoform x2 | GO:0005783 GO:0030424 GO:0030425 GO:0031175 GO:0032584 GO:0046872 |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
habu1_s1341_g04747.t3 | 1 | 1 | FYVE | 339 | 405 | 1.3e-08 | 34.5 | 2.6e-12 | 1.3e-08 | 34.5 |
Expression profile
Libraries | FPKM |
---|---|
>Adult | |
Venom fang forming tissue | 2.3 |
Venom grand-1 | 0.5 |
Pit, infrared sensing | 1.3 |
Nose | 1.7 |
Brain-1 | 3.2 |
Eye | 3.2 |
fetal fibroblast | 2.3 |
venom gland-2 | 1.8 |
Brain-2 | 3.4 |
Spleen | 2.4 |
Lung | 0.5 |
Liver | 0.5 |
Kidney | 1.7 |
Pancreas | 1.5 |
Small intestine | 2.1 |
Large intestine | 2.1 |
Stomach | 1.6 |
heart | 1.7 |
ovary | 8.2 |
cheek muscle | 2.6 |
Transcript
Transcript ID | habu1_s1341_g04747.t1 |
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Definition | - |
>habu1_s1341_g04747.t1 gcctctgattggctcactgcctctgataggcgggtatggccgccgctttcccgaagcttgtgctgtgtagggaagcttag gcacagccgggtctctctcttgctaggaagtccgggcggctgggagaggggcgaggtcgagtggaacagagccgctgggg aggctccgccccttctcccgatttgagattgggtatgcaggtatcagaacgtgatggtggagtgtccacagggaatggat tagacagcgtcacagcatctgatgcccaacaagtttcgccctctcaccctaagcctccttccttggacctctttaatctg gtagtatcttataagcaactagagctgtacctggaaccactgcaggatgttgctgaaggagtatggttcctcctcagctg gcagatgcccttctgctctctccttacttgtttgggcgtcaactttctgctgcttactctgagtgaagctgcttggtatg ggctgtgtgccctgctaatctcagtgcctgccatgctcggctatctacaggaaacatgccgtatccgtcttactgaagag cagctggcacgccgtaggtatcacagtgtgcggcgagaagatgtgagaaaagttcaactttctcgaaatgaggctgtggc tgaagttaaaggcttcctgatccgattagaagccctcctgaacaggctctgtggtggctgtgaagcagcttaccgtgtct tcttctgggagaaccgtactgtctcctcccagttttatgggatgctgatgggttcagtttgtgccctttacctgctgccc ctctgctggatctttgttcttcttaatagtgcccttttctttcgaaatgtggcattttatcaagtaatgctggacctaaa gtcagctgtagagcagcgcttgggcttcaaatccatccctgtggctccagagctggaagagctggatcttggagaagtgg aagctactgtcttgccagactggacacctaccctgactgggactgaggacctaactcctggtagtgtggaggaagcagag gaagcagaacctgatgatgaattcaaggatgcaattgaggaggaagatgacatctctcagggctcaggagagtttgagct tggccttcctgacaactcctttatgagcaagaatgaagtgattcgtagcaaggtgtcacggttgacagaacggctgcgca aacgctacccaaccaacaaccttggaaactgtgcaagttgttctgccactttctctgtcttgaagaagaggcgaagctgc agtaactgtgggaacagtttttgctccaggtgctgttctttcaaaattcccaagagctacatgggggctacagccccaga cgcccagcgggagactgtcttcgtatgtgggcagtgtaaccaagcactcaccaa |
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Transcript ID | habu1_s1341_g04747.t2 |
Definition | - |
>habu1_s1341_g04747.t2 gcctctgattggctcactgcctctgataggcgggtatggccgccgctttcccgaagcttgtgctgtgtagggaagcttag gcacagccgggtctctctcttgctaggaagtccgggcggctgggagaggggcgaggtcgagtggaacagagccgctgggg aggctccgccccttctcccgatttgagattgggtatgcaggtatcagaacgtgatggtggagtgtccacagggaatggat tagacagcgtcacagcatctgatgcccaacaagtttcgccctctcaccctaagcctccttccttggacctctttaatctg gtagtatcttataagcaactagagctgtacctggaaccactgcaggatgttgctgaaggagtatggttcctcctcagctg gcagatgcccttctgctctctccttacttgtttgggcgtcaactttctgctgcttactctgagtgaagctgcttggtatg ggctgtgtgccctgctaatctcagtgcctgccatgctcggctatctacaggaaacatgccgtatccgtcttactgaagag cagctggcacgccgtaggtatcacagtgtgcggcgagaagatgtgagaaaagttcaactttctcgaaatgaggctgtggc tgaagttaaaggcttcctgatccgattagaagccctcctgaacaggctctgtggtggctgtgaagcagcttaccgtgtct tcttctgggagaaccgtactgtctcctcccagttttatgggatgctgatgggttcagtttgtgccctttacctgctgccc ctctgctggatctttgttcttcttaatagtgcccttttctttcgaaatgtggcattttatcaagtaatgctggacctaaa gtcagctgtagagcagcgcttgggcttcaaatccatccctgtggctccagagctggaagagctggatcttggagaagtgg aagctactgtcttgccagactggacacctaccctgactgggactgaggacctaactcctggtagtgtggaggaagcagag gaagcagaacctgatgatgaattcaaggatgcaattgaggagactcagctgcttgtaatggaggaagatgacatctctca gggctcaggagagtttgagcttggccttcctgacaactcctttatgagcaagaatgaagtgattcgtagcaaggtgtcac ggttgacagaacggctgcgcaaacgctacccaaccaacaaccttggaaactgtgcaagttgttctgccactttctctgtc ttgaagaagaggcgaagctgcagtaactgtgggaacagtttttgctccaggtgctgttctttcaaaattcccaagagcta catgggggctacagccccagacgcccagcgggagactgtcttcgtatgtgggcagtgtaaccaagcactcaccaa |
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Transcript ID | habu1_s1341_g04747.t3 |
Definition | - |
>habu1_s1341_g04747.t3 atgcgatgctggcagctgtaattcagtgcatctggacggcgtcagtatgcaggtatcagaacgtgatggtggagtgtcca cagggaatggattagacagcgtcacagcatctgatgcccaacaagtttcgccctctcaccctaagcctccttccttggac ctctttaatctggtagtatcttataagcaactagagctgtacctggaaccactgcaggatgttgctgaaggagtatggtt cctcctcagctggcagatgcccttctgctctctccttacttgtttgggcgtcaactttctgctgcttactctgagtgaag ctgcttggtatgggctgtgtgccctgctaatctcagtgcctgccatgctcggctatctacaggaaacatgccgtatccgt cttactgaagagcagctggcacgccgtaggtatcacagtgtgcggcgagaagatgtgagaaaagttcaactttctcgaaa tgaggctgtggctgaagttaaaggcttcctgatccgattagaagccctcctgaacaggctctgtggtggctgtgaagcag cttaccgtgtcttcttctgggagaaccgtactgtctcctcccagttttatgggatgctgatgggttcagtttgtgccctt tacctgctgcccctctgctggatctttgttcttcttaatagtgcccttttctttcgaaatgtggcattttatcaagtaat gctggacctaaagtcagctgtagagcagcgcttgggcttcaaatccatccctgtggctccagagctggaagagctggatc ttggagaagtggaagctactgtcttgccagactggacacctaccctgactgggactgaggacctaactcctggtagtgtg gaggaagcagaggaagcagaacctgatgatgaattcaaggatgcaattgaggaggaagatgacatctctcagggctcagg agagtttgagcttggccttcctgacaactcctttatgagcaagaatgaagtgattcgtagcaaggtgtcacggttgacag aacggctgcgcaaacgctacccaaccaacaaccttggaaactgtgcaagttgttctgccactttctctgtcttgaagaag aggcgaagctgcagtaactgtgggaacagtttttgctccaggtgctgttctttcaaaattcccaagagctacatgggggc tacagccccagacgcccagcgggagactgtcttcgtatgtgggcagtgtaaccaagcactcaccaa |
Protein
Protein ID | habu1_s1341_g04747.t1 |
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Definition | - |
>habu1_s1341_g04747.t1 MQVSERDGGVSTGNGLDSVTASDAQQVSPSHPKPPSLDLFNLVVSYKQLELYLEPLQDVAEGVWFLLSWQMPFCSLLTCL GVNFLLLTLSEAAWYGLCALLISVPAMLGYLQETCRIRLTEEQLARRRYHSVRREDVRKVQLSRNEAVAEVKGFLIRLEA LLNRLCGGCEAAYRVFFWENRTVSSQFYGMLMGSVCALYLLPLCWIFVLLNSALFFRNVAFYQVMLDLKSAVEQRLGFKS IPVAPELEELDLGEVEATVLPDWTPTLTGTEDLTPGSVEEAEEAEPDDEFKDAIEEEDDISQGSGEFELGLPDNSFMSKN EVIRSKVSRLTERLRKRYPTNNLGNCASCSATFSVLKKRRSCSNCGNSFCSRCCSFKIPKSYMGATAPDAQRETVFVCGQ CNQALT |
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Protein ID | habu1_s1341_g04747.t2 |
Definition | - |
>habu1_s1341_g04747.t2 MQVSERDGGVSTGNGLDSVTASDAQQVSPSHPKPPSLDLFNLVVSYKQLELYLEPLQDVAEGVWFLLSWQMPFCSLLTCL GVNFLLLTLSEAAWYGLCALLISVPAMLGYLQETCRIRLTEEQLARRRYHSVRREDVRKVQLSRNEAVAEVKGFLIRLEA LLNRLCGGCEAAYRVFFWENRTVSSQFYGMLMGSVCALYLLPLCWIFVLLNSALFFRNVAFYQVMLDLKSAVEQRLGFKS IPVAPELEELDLGEVEATVLPDWTPTLTGTEDLTPGSVEEAEEAEPDDEFKDAIEETQLLVMEEDDISQGSGEFELGLPD NSFMSKNEVIRSKVSRLTERLRKRYPTNNLGNCASCSATFSVLKKRRSCSNCGNSFCSRCCSFKIPKSYMGATAPDAQRE TVFVCGQCNQALT |
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Protein ID | habu1_s1341_g04747.t3 |
Definition | - |
>habu1_s1341_g04747.t3 MQVSERDGGVSTGNGLDSVTASDAQQVSPSHPKPPSLDLFNLVVSYKQLELYLEPLQDVAEGVWFLLSWQMPFCSLLTCL GVNFLLLTLSEAAWYGLCALLISVPAMLGYLQETCRIRLTEEQLARRRYHSVRREDVRKVQLSRNEAVAEVKGFLIRLEA LLNRLCGGCEAAYRVFFWENRTVSSQFYGMLMGSVCALYLLPLCWIFVLLNSALFFRNVAFYQVMLDLKSAVEQRLGFKS IPVAPELEELDLGEVEATVLPDWTPTLTGTEDLTPGSVEEAEEAEPDDEFKDAIEEEDDISQGSGEFELGLPDNSFMSKN EVIRSKVSRLTERLRKRYPTNNLGNCASCSATFSVLKKRRSCSNCGNSFCSRCCSFKIPKSYMGATAPDAQRETVFVCGQ CNQALT |