Gene
| Gene Model ID | habu1_s1341_g04747 |
|---|---|
| Locus | habu1_scaffold1341 : 1 ... 17685 : - |
| To GenomeBrowser | habu1_scaffold1341:1..17685 |
| Genes list of scaffold | habu1_scaffold1341 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| protrudin isoform x2 | GO:0005783 GO:0030424 GO:0030425 GO:0031175 GO:0032584 GO:0046872 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1341_g04747.t3 | 1 | 1 | FYVE | 339 | 405 | 1.3e-08 | 34.5 | 2.6e-12 | 1.3e-08 | 34.5 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 2.3 |
| Venom grand-1 | 0.5 |
| Pit, infrared sensing | 1.3 |
| Nose | 1.7 |
| Brain-1 | 3.2 |
| Eye | 3.2 |
| fetal fibroblast | 2.3 |
| venom gland-2 | 1.8 |
| Brain-2 | 3.4 |
| Spleen | 2.4 |
| Lung | 0.5 |
| Liver | 0.5 |
| Kidney | 1.7 |
| Pancreas | 1.5 |
| Small intestine | 2.1 |
| Large intestine | 2.1 |
| Stomach | 1.6 |
| heart | 1.7 |
| ovary | 8.2 |
| cheek muscle | 2.6 |
Transcript
| Transcript ID | habu1_s1341_g04747.t1 |
|---|---|
| Definition | - |
>habu1_s1341_g04747.t1 gcctctgattggctcactgcctctgataggcgggtatggccgccgctttcccgaagcttgtgctgtgtagggaagcttag gcacagccgggtctctctcttgctaggaagtccgggcggctgggagaggggcgaggtcgagtggaacagagccgctgggg aggctccgccccttctcccgatttgagattgggtatgcaggtatcagaacgtgatggtggagtgtccacagggaatggat tagacagcgtcacagcatctgatgcccaacaagtttcgccctctcaccctaagcctccttccttggacctctttaatctg gtagtatcttataagcaactagagctgtacctggaaccactgcaggatgttgctgaaggagtatggttcctcctcagctg gcagatgcccttctgctctctccttacttgtttgggcgtcaactttctgctgcttactctgagtgaagctgcttggtatg ggctgtgtgccctgctaatctcagtgcctgccatgctcggctatctacaggaaacatgccgtatccgtcttactgaagag cagctggcacgccgtaggtatcacagtgtgcggcgagaagatgtgagaaaagttcaactttctcgaaatgaggctgtggc tgaagttaaaggcttcctgatccgattagaagccctcctgaacaggctctgtggtggctgtgaagcagcttaccgtgtct tcttctgggagaaccgtactgtctcctcccagttttatgggatgctgatgggttcagtttgtgccctttacctgctgccc ctctgctggatctttgttcttcttaatagtgcccttttctttcgaaatgtggcattttatcaagtaatgctggacctaaa gtcagctgtagagcagcgcttgggcttcaaatccatccctgtggctccagagctggaagagctggatcttggagaagtgg aagctactgtcttgccagactggacacctaccctgactgggactgaggacctaactcctggtagtgtggaggaagcagag gaagcagaacctgatgatgaattcaaggatgcaattgaggaggaagatgacatctctcagggctcaggagagtttgagct tggccttcctgacaactcctttatgagcaagaatgaagtgattcgtagcaaggtgtcacggttgacagaacggctgcgca aacgctacccaaccaacaaccttggaaactgtgcaagttgttctgccactttctctgtcttgaagaagaggcgaagctgc agtaactgtgggaacagtttttgctccaggtgctgttctttcaaaattcccaagagctacatgggggctacagccccaga cgcccagcgggagactgtcttcgtatgtgggcagtgtaaccaagcactcaccaa |
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| Transcript ID | habu1_s1341_g04747.t2 |
| Definition | - |
>habu1_s1341_g04747.t2 gcctctgattggctcactgcctctgataggcgggtatggccgccgctttcccgaagcttgtgctgtgtagggaagcttag gcacagccgggtctctctcttgctaggaagtccgggcggctgggagaggggcgaggtcgagtggaacagagccgctgggg aggctccgccccttctcccgatttgagattgggtatgcaggtatcagaacgtgatggtggagtgtccacagggaatggat tagacagcgtcacagcatctgatgcccaacaagtttcgccctctcaccctaagcctccttccttggacctctttaatctg gtagtatcttataagcaactagagctgtacctggaaccactgcaggatgttgctgaaggagtatggttcctcctcagctg gcagatgcccttctgctctctccttacttgtttgggcgtcaactttctgctgcttactctgagtgaagctgcttggtatg ggctgtgtgccctgctaatctcagtgcctgccatgctcggctatctacaggaaacatgccgtatccgtcttactgaagag cagctggcacgccgtaggtatcacagtgtgcggcgagaagatgtgagaaaagttcaactttctcgaaatgaggctgtggc tgaagttaaaggcttcctgatccgattagaagccctcctgaacaggctctgtggtggctgtgaagcagcttaccgtgtct tcttctgggagaaccgtactgtctcctcccagttttatgggatgctgatgggttcagtttgtgccctttacctgctgccc ctctgctggatctttgttcttcttaatagtgcccttttctttcgaaatgtggcattttatcaagtaatgctggacctaaa gtcagctgtagagcagcgcttgggcttcaaatccatccctgtggctccagagctggaagagctggatcttggagaagtgg aagctactgtcttgccagactggacacctaccctgactgggactgaggacctaactcctggtagtgtggaggaagcagag gaagcagaacctgatgatgaattcaaggatgcaattgaggagactcagctgcttgtaatggaggaagatgacatctctca gggctcaggagagtttgagcttggccttcctgacaactcctttatgagcaagaatgaagtgattcgtagcaaggtgtcac ggttgacagaacggctgcgcaaacgctacccaaccaacaaccttggaaactgtgcaagttgttctgccactttctctgtc ttgaagaagaggcgaagctgcagtaactgtgggaacagtttttgctccaggtgctgttctttcaaaattcccaagagcta catgggggctacagccccagacgcccagcgggagactgtcttcgtatgtgggcagtgtaaccaagcactcaccaa |
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| Transcript ID | habu1_s1341_g04747.t3 |
| Definition | - |
>habu1_s1341_g04747.t3 atgcgatgctggcagctgtaattcagtgcatctggacggcgtcagtatgcaggtatcagaacgtgatggtggagtgtcca cagggaatggattagacagcgtcacagcatctgatgcccaacaagtttcgccctctcaccctaagcctccttccttggac ctctttaatctggtagtatcttataagcaactagagctgtacctggaaccactgcaggatgttgctgaaggagtatggtt cctcctcagctggcagatgcccttctgctctctccttacttgtttgggcgtcaactttctgctgcttactctgagtgaag ctgcttggtatgggctgtgtgccctgctaatctcagtgcctgccatgctcggctatctacaggaaacatgccgtatccgt cttactgaagagcagctggcacgccgtaggtatcacagtgtgcggcgagaagatgtgagaaaagttcaactttctcgaaa tgaggctgtggctgaagttaaaggcttcctgatccgattagaagccctcctgaacaggctctgtggtggctgtgaagcag cttaccgtgtcttcttctgggagaaccgtactgtctcctcccagttttatgggatgctgatgggttcagtttgtgccctt tacctgctgcccctctgctggatctttgttcttcttaatagtgcccttttctttcgaaatgtggcattttatcaagtaat gctggacctaaagtcagctgtagagcagcgcttgggcttcaaatccatccctgtggctccagagctggaagagctggatc ttggagaagtggaagctactgtcttgccagactggacacctaccctgactgggactgaggacctaactcctggtagtgtg gaggaagcagaggaagcagaacctgatgatgaattcaaggatgcaattgaggaggaagatgacatctctcagggctcagg agagtttgagcttggccttcctgacaactcctttatgagcaagaatgaagtgattcgtagcaaggtgtcacggttgacag aacggctgcgcaaacgctacccaaccaacaaccttggaaactgtgcaagttgttctgccactttctctgtcttgaagaag aggcgaagctgcagtaactgtgggaacagtttttgctccaggtgctgttctttcaaaattcccaagagctacatgggggc tacagccccagacgcccagcgggagactgtcttcgtatgtgggcagtgtaaccaagcactcaccaa |
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Protein
| Protein ID | habu1_s1341_g04747.t1 |
|---|---|
| Definition | - |
>habu1_s1341_g04747.t1 MQVSERDGGVSTGNGLDSVTASDAQQVSPSHPKPPSLDLFNLVVSYKQLELYLEPLQDVAEGVWFLLSWQMPFCSLLTCL GVNFLLLTLSEAAWYGLCALLISVPAMLGYLQETCRIRLTEEQLARRRYHSVRREDVRKVQLSRNEAVAEVKGFLIRLEA LLNRLCGGCEAAYRVFFWENRTVSSQFYGMLMGSVCALYLLPLCWIFVLLNSALFFRNVAFYQVMLDLKSAVEQRLGFKS IPVAPELEELDLGEVEATVLPDWTPTLTGTEDLTPGSVEEAEEAEPDDEFKDAIEEEDDISQGSGEFELGLPDNSFMSKN EVIRSKVSRLTERLRKRYPTNNLGNCASCSATFSVLKKRRSCSNCGNSFCSRCCSFKIPKSYMGATAPDAQRETVFVCGQ CNQALT |
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| Protein ID | habu1_s1341_g04747.t2 |
| Definition | - |
>habu1_s1341_g04747.t2 MQVSERDGGVSTGNGLDSVTASDAQQVSPSHPKPPSLDLFNLVVSYKQLELYLEPLQDVAEGVWFLLSWQMPFCSLLTCL GVNFLLLTLSEAAWYGLCALLISVPAMLGYLQETCRIRLTEEQLARRRYHSVRREDVRKVQLSRNEAVAEVKGFLIRLEA LLNRLCGGCEAAYRVFFWENRTVSSQFYGMLMGSVCALYLLPLCWIFVLLNSALFFRNVAFYQVMLDLKSAVEQRLGFKS IPVAPELEELDLGEVEATVLPDWTPTLTGTEDLTPGSVEEAEEAEPDDEFKDAIEETQLLVMEEDDISQGSGEFELGLPD NSFMSKNEVIRSKVSRLTERLRKRYPTNNLGNCASCSATFSVLKKRRSCSNCGNSFCSRCCSFKIPKSYMGATAPDAQRE TVFVCGQCNQALT |
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| Protein ID | habu1_s1341_g04747.t3 |
| Definition | - |
>habu1_s1341_g04747.t3 MQVSERDGGVSTGNGLDSVTASDAQQVSPSHPKPPSLDLFNLVVSYKQLELYLEPLQDVAEGVWFLLSWQMPFCSLLTCL GVNFLLLTLSEAAWYGLCALLISVPAMLGYLQETCRIRLTEEQLARRRYHSVRREDVRKVQLSRNEAVAEVKGFLIRLEA LLNRLCGGCEAAYRVFFWENRTVSSQFYGMLMGSVCALYLLPLCWIFVLLNSALFFRNVAFYQVMLDLKSAVEQRLGFKS IPVAPELEELDLGEVEATVLPDWTPTLTGTEDLTPGSVEEAEEAEPDDEFKDAIEEEDDISQGSGEFELGLPDNSFMSKN EVIRSKVSRLTERLRKRYPTNNLGNCASCSATFSVLKKRRSCSNCGNSFCSRCCSFKIPKSYMGATAPDAQRETVFVCGQ CNQALT |
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