Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s1341_g04749
Locus habu1_scaffold1341 : 42820 ... 53635 : -
To GenomeBrowser habu1_scaffold1341:42820..53635
Genes list of scaffold habu1_scaffold1341

Annotation by Blast2GO
Annotation GO
phosphatidylinositol 4-kinase type 2-alpha EC:2.7.1.0 GO:0005739 GO:0016301 GO:0016310 GO:0016773 GO:0030425 GO:0042734 GO:0043025 GO:0044231

Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
habu1_s1341_g04749.t1 1 1 PI3_PI4_kinase 139 439 0.0 193.2 0.0 0.0 192.8

Blast Hit to nr / sp
query Subject ID Subject Name evalue
habu1_s1341_g04749.t1 gi|602626006|ref|XP_007419966.1| PREDICTED: phosphatidylinositol 4-kinase type 2-alpha [Python bivittatus] 0.0
habu1_s1341_g04749.t1 gi|637278478|ref|XP_008104730.1| PREDICTED: phosphatidylinositol 4-kinase type 2-alpha [Anolis carolinensis] 0.0
habu1_s1341_g04749.t1 gi|50768905|ref|XP_423069.1| PREDICTED: phosphatidylinositol 4-kinase type 2-alpha isoform 2 [Gallus gallus] 0.0
habu1_s1341_g04749.t1 gi|466001651|ref|XP_004268464.1| PREDICTED: phosphatidylinositol 4-kinase type 2-alpha [Orcinus orca] 0.0
habu1_s1341_g04749.t1 gi|593741440|ref|XP_007126224.1| PREDICTED: phosphatidylinositol 4-kinase type 2-alpha [Physeter catodon] 0.0

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 4.7
Venom grand-1 2.2
Pit, infrared sensing 4.9
Nose 4.4
Brain-1 3.8
Eye 5.6
fetal fibroblast 7.9
venom gland-2 2.7
Brain-2 4.2
Spleen 2.7
Lung 2.3
Liver 13.5
Kidney 2.1
Pancreas 1.0
Small intestine 1.8
Large intestine 2.5
Stomach 1.8
heart 3.2
ovary 16.9
cheek muscle 2.7

Transcript
Transcript IDhabu1_s1341_g04749.t1
Definition-
>habu1_s1341_g04749.t1
agcggcgttgagtctggagaccgcggggccgtggtttatgcgtgcaagcgcccatccggggttagatcagcgcctcggac
cggctcggcctatggatgaaacgagcccgctggtatctccagagcgcggtccggccccggggtatgggctgcctgggggt
gccgtgcgctccccgccttgccccgctgcctctagtactcccgctggaccgtgtccctgtccctccccaccgggatcccc
cgcaggtggccgcgaccgggagcgccagccgctgttggatcggggtggtggtgcggagcgtggagccacgcggggcactg
tagcagtagccggggcgacccagactcaggctccagtgggggtcggagtagggatcgccgcgggtcgaagtgaacgggag
caccggaatgaatttcccgatgacccagaattcgccgaggtagtgcgactggcagaagtggcgagcgaacgcggaatcta
ccctgagcgcatctaccaaggttctagcggcagctatttcgtcaaggatccgcaggggaaaattattggtgtgttcaaac
cgaagaatgaagaaccatatgggcatctaaacccaaagtggacaaaatggctgcaaaaactttgctgtccctgctgtttt
ggaagagattgtcttgttctcaaccaaggatatctgtctgaagctggtgcaagtcttgttgaccaaaagctggaactgaa
cattgtacctcgcacaaaggtggtggacttggctagtgaaacgtttaactacagtgccattgacagagtgaagtctcggg
gcaagcgtctggccttggaaaaagtgcccaaggttgggcagaggtttcatcgaattggtcttccaccaaaggtgggttcc
ttccagctttttgtggaaggctataaggatgcagattactggttgcggcgctttgaatctgagcctcttccagaaaagag
taaccatcaattgttgctacagtttgagagattggtggtgctggactatattatacgcaatactgataggggtaatgaca
actggctgatcaaatgtgattgccccctggacagtacaagtatgcaggactcagaatgggttgtagtaaaggagcctgta
attaaactggcagccattgacaatggtttggctttccctcttaagcatccagactcttggagagcatatcctttctattg
ggcatggctgccacaggccaaagtgccattctctcaagaaatcaaggatcttatcctgccaaagatttcagaccctaatt
ttgtcaaggatctagaagaagatctctatgaactcttcaagaaagatccaggttttgaccgaggccaatttcataagcag
attgcagtaatgcgtggtcagatcctgaacttgatgcaagccctgaaagatgggaagagccctcttaacttggtccagat
gcctcctgttattgtagagactgctcgctcccatcagcgctctgccagtgaatcatatacacaaagcttccagagccgca
ggcccttctttacctggtggtagcagttgcctctattctcagtgaagaacttgagagggggcatcgtttgagagcaagca
atcaaccctccagactgaggttgcctgctgtagatgatcaggaatgtaagcagggtcagtctcaactctgcacgttccca
gtgagaaacgagggatgttcattggtccgattgctgctgccctctctttgggctggacatgtctaatcatcagcccaagc
atgacagcatttcctagcaggagcctgcatgccatgccctttttcaagatatccttctaatgttcatttggatggacatc
tcataaggtctcctacaaggaagggctggtggtgaggggataatccaaattggatggaagcacttcactgtgtatcactg
ccagccttattgttccttcctcccttgttgcacatttgttattcctgttgaaagcaggttttcctgccccgctggatttg
ctgtttctcttgtcctatggaagagctcctagggtgtatgccttggggctgttcaatagggaatgtggctataatcagaa
tttaatctgatataaagtaacttattgaggattgggcc

Protein
Protein IDhabu1_s1341_g04749.t1
Definition-
>habu1_s1341_g04749.t1
MDETSPLVSPERGPAPGYGLPGGAVRSPPCPAASSTPAGPCPCPSPPGSPAGGRDRERQPLLDRGGGAERGATRGTVAVA
GATQTQAPVGVGVGIAAGRSEREHRNEFPDDPEFAEVVRLAEVASERGIYPERIYQGSSGSYFVKDPQGKIIGVFKPKNE
EPYGHLNPKWTKWLQKLCCPCCFGRDCLVLNQGYLSEAGASLVDQKLELNIVPRTKVVDLASETFNYSAIDRVKSRGKRL
ALEKVPKVGQRFHRIGLPPKVGSFQLFVEGYKDADYWLRRFESEPLPEKSNHQLLLQFERLVVLDYIIRNTDRGNDNWLI
KCDCPLDSTSMQDSEWVVVKEPVIKLAAIDNGLAFPLKHPDSWRAYPFYWAWLPQAKVPFSQEIKDLILPKISDPNFVKD
LEEDLYELFKKDPGFDRGQFHKQIAVMRGQILNLMQALKDGKSPLNLVQMPPVIVETARSHQRSASESYTQSFQSRRPFF
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