Gene
| Gene Model ID | habu1_s1341_g04751 |
|---|---|
| Locus | habu1_scaffold1341 : 72490 ... 81005 : - |
| To GenomeBrowser | habu1_scaffold1341:72490..81005 |
| Genes list of scaffold | habu1_scaffold1341 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| 4-hydroxy-2-oxoglutarate mitochondrial | GO:0005739 GO:0009436 GO:0016829 GO:0019470 GO:0033609 GO:0042803 GO:0042866 GO:0070062 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1341_g04751.t1 | 2 | 1 | DHDPS | 44 | 222 | 0.0 | 161.5 | 1.7e-40 | 8.2e-37 | 126.3 |
| habu1_s1341_g04751.t1 | 2 | 2 | DHDPS | 302 | 396 | 0.0 | 161.5 | 3.6e-12 | 1.8e-08 | 33.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s1341_g04751.t1 | gi|602626000|ref|XP_007419963.1| | PREDICTED: 4-hydroxy-2-oxoglutarate aldolase, mitochondrial [Python bivittatus] | 0.0 |
| habu1_s1341_g04751.t1 | gi|704579410|ref|XP_010187983.1| | PREDICTED: LOW QUALITY PROTEIN: 4-hydroxy-2-oxoglutarate aldolase, mitochondrial [Mesitornis unicolor] | 0.0 |
| habu1_s1341_g04751.t1 | gi|637278493|ref|XP_008104732.1| | PREDICTED: 4-hydroxy-2-oxoglutarate aldolase, mitochondrial [Anolis carolinensis] | 0.0 |
| habu1_s1341_g04751.t1 | gi|556973942|ref|XP_005994900.1| | PREDICTED: 4-hydroxy-2-oxoglutarate aldolase, mitochondrial isoform X1 [Latimeria chalumnae] | 0.0 |
| habu1_s1341_g04751.t1 | gi|641793740|ref|XP_008178048.1| | PREDICTED: 4-hydroxy-2-oxoglutarate aldolase, mitochondrial [Chrysemys picta bellii] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 1.5 |
| Venom grand-1 | 5.0 |
| Pit, infrared sensing | 1.3 |
| Nose | 2.5 |
| Brain-1 | 0.7 |
| Eye | 3.4 |
| fetal fibroblast | 0.6 |
| venom gland-2 | 13.2 |
| Brain-2 | 1.1 |
| Spleen | 23.6 |
| Lung | 3.7 |
| Liver | 20.7 |
| Kidney | 122.7 |
| Pancreas | 82.9 |
| Small intestine | 3.2 |
| Large intestine | 3.3 |
| Stomach | 7.2 |
| heart | 2.7 |
| ovary | 33.9 |
| cheek muscle | 7.2 |
Transcript
| Transcript ID | habu1_s1341_g04751.t1 |
|---|---|
| Definition | - |
>habu1_s1341_g04751.t1 cggcacagcattcgcgtcgggcaacagcgggatggccagggcgaccctagccccgcgctttctgtgccccttttggccgc ggaccccttgcgcgatccccgcggcgggaggtgttctccgaaggttcttggctgcagcggcacctgctcgccgcctagat ctgcggggtatctatccgcccctcgtcacccctttcacgtctcaaggccgtgtagattacgcccggttgcaggagaatct gcgcctctacgccgaaatccccttccgaggttttgtagtacatggctccaatggggaagccccctacttgacacaggagg aatgcctggaagtagtgatgcgggtgcaccaagctgtgcctaaggaaaagctcctgctggttgggtcaggatgtgaatca actcactgcaccattgagaaaacaaaacaaatggctgacaagggtgctgatgctgctcttgtggtaactccttgctactt ccgtggaagcatgaccagtgctgccttgatccatcattacacacaggtggctgatgcatctccaatccctgtgatactgt acagtgttccagccaacacaggcttggaactgcccaatgaggcagtgctcagcctcgcgcaacatcctaacatagtgggg atcaaggacagtgatggcaatattacccgcctggggctgcttgtgcacaagacgcagaatgaagacttccagccactggg tgagatcatctgtggtttcggggtggagtttcatcagtacgcagatgacacccagctgtacatctccaccccggaccacc ccaacgatgccgcggaagtaatgtcccggtgcctggaggccgtgcgagtctggatggggaggaacaggcttcgactcaac ctgtccaagaccgagtggctgtggcttccggcgtcacaacatagccagttggctccatccctggctatcgggggtgctac aggaggagtctgtgcccttgccaacgtactaggcagccctgtctgtcggcttgatgatctttgccgcgcaggaaattggg gtgaagcccgtgaactgcagcaccgattgattgagccaaatattgcagtcacccggaaatttggggtcccaggtctcaag caggcaatggagtggtttggctataaaggaggcttttgccgtgcccccttgctcccattaactgagacacaattaatgga attacgccgtgatttcacctccaatggctggctctgaaggacaaaggagttctagcaatgcctggaatcttgctttagcc aattactatctaattgggaaaggctcacatgtcttgcaatttactttgatgcagctcattcaactcatagtgtacttatt ggagcatcactatagcaacaaaccagtggaataaaatcttcagaatggagctttaaatgacaaaaggctgcatctgcatc tcatggttgactagaagcccaacattcctttgtcacttaaaatttctcaattctgcatatctagaatatagtcttatcta tattctattcttcagcattttcctataccatgattagttctggaatcatagaatgttaaaatgctaattctctgggttca gaaatcagatatgtgaaatcataatgtcctatgtaaaagatgacatttcattcatttttgtgacttactaggcatcacta tctcttgtacaataaattgagtttgttgcatagttgta |
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Protein
| Protein ID | habu1_s1341_g04751.t1 |
|---|---|
| Definition | - |
>habu1_s1341_g04751.t1 MARATLAPRFLCPFWPRTPCAIPAAGGVLRRFLAAAAPARRLDLRGIYPPLVTPFTSQGRVDYARLQENLRLYAEIPFRG FVVHGSNGEAPYLTQEECLEVVMRVHQAVPKEKLLLVGSGCESTHCTIEKTKQMADKGADAALVVTPCYFRGSMTSAALI HHYTQVADASPIPVILYSVPANTGLELPNEAVLSLAQHPNIVGIKDSDGNITRLGLLVHKTQNEDFQPLGEIICGFGVEF HQYADDTQLYISTPDHPNDAAEVMSRCLEAVRVWMGRNRLRLNLSKTEWLWLPASQHSQLAPSLAIGGATGGVCALANVL GSPVCRLDDLCRAGNWGEARELQHRLIEPNIAVTRKFGVPGLKQAMEWFGYKGGFCRAPLLPLTETQLMELRRDFTSNGW L |
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