Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s1341_g04752
Locus habu1_scaffold1341 : 84043 ... 121935 : -
To GenomeBrowser habu1_scaffold1341:84043..121935
Genes list of scaffold habu1_scaffold1341

Annotation by Blast2GO
Annotation GO
ankyrin repeat domain-containing protein 2 GO:0000791 GO:0005634 GO:0005829 GO:0031432 GO:0031674 GO:0035914 GO:0043422 GO:0045662

Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
habu1_s1341_g04752.t3 3 1 Ank_2 289 379 1.2e-37 128.1 2.0e-21 5.8e-18 65.0
habu1_s1341_g04752.t3 4 1 Ank_4 289 333 1.0e-23 83.2 5.8e-07 0.0017 18.8
habu1_s1341_g04752.t3 3 1 Ank_5 303 342 8.8e-19 67.1 3.2e-06 0.0096 16.1
habu1_s1341_g04752.t3 4 2 Ank_4 316 368 1.0e-23 83.2 3.0e-11 9.0e-08 32.4
habu1_s1341_g04752.t3 3 1 Ank 317 346 6.6e-25 85.6 3.1e-08 9.3e-05 22.0
habu1_s1341_g04752.t3 3 2 Ank_5 349 387 8.8e-19 67.1 3.6e-12 1.1e-08 35.0
habu1_s1341_g04752.t3 3 2 Ank_2 350 412 1.2e-37 128.1 1.1e-18 3.2e-15 56.2
habu1_s1341_g04752.t3 3 2 Ank 350 380 6.6e-25 85.6 2.7e-11 8.1e-08 31.7
habu1_s1341_g04752.t3 2 1 Ank_3 350 375 6.4e-18 63.0 1.3e-08 3.9e-05 23.4
habu1_s1341_g04752.t3 4 3 Ank_4 351 402 1.0e-23 83.2 7.8e-12 2.3e-08 34.3
habu1_s1341_g04752.t3 3 3 Ank_2 379 412 1.2e-37 128.1 4.5e-08 0.00013 22.1
habu1_s1341_g04752.t3 3 3 Ank_5 379 421 8.8e-19 67.1 3.9e-07 0.0011 19.0
habu1_s1341_g04752.t3 3 3 Ank 382 412 6.6e-25 85.6 1.4e-09 4.3e-06 26.2
habu1_s1341_g04752.t3 2 2 Ank_3 382 407 6.4e-18 63.0 1.7e-07 0.0005 20.0
habu1_s1341_g04752.t3 4 4 Ank_4 383 420 1.0e-23 83.2 6.2e-07 0.0018 18.7

Blast Hit to nr / sp
query Subject ID Subject Name evalue
habu1_s1341_g04752.t3 gi|395828504|ref|XP_003787414.1| 0.0

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 0.6
Venom grand-1 0.2
Pit, infrared sensing 0.9
Nose 0.7
Brain-1 0.1
Eye 0.5
fetal fibroblast 3.2
venom gland-2 0.5
Brain-2 0.1
Spleen 0.3
Lung 0.3
Liver 0.4
Kidney 0.3
Pancreas 0.1
Small intestine 0.4
Large intestine 0.3
Stomach 0.4
heart 1.1
ovary 0.4
cheek muscle 0.5

Transcript
Transcript IDhabu1_s1341_g04752.t1
Definition-
>habu1_s1341_g04752.t1
gagagccctgagccgggctcaggcacgtaggtcacttgaagttgcaccctgggacttcggccatgggcagctgcgtggga
agacaacgcagagaggggccgatcaccccaggaaacccgcgcaagcgggcaggtcgtaatgaacctctaaaaaaggatcg
tcccaaatggaagagtgattatccaatgacggatgggcaactaagaagcaaacgggatgaattttgggatacagcccctg
cctttgagggacgcaaagagatttgggatgcactcaaggctgccgcctatgctgtggaggcaaatgatcatgggctagca
caagccattattgatggtgctggagttaccttgcctcatggctcacttactgagtgctatgatgaattgggtaaccgata
ccaacttcctgtatattgcctggcaccacctattaacttgattatggagtggagtgaagaggagggtgcagaacctccag
agccagcacccaatacccgccgacaaacaaagatggatatggaccacaagataaaaagggcaacggagctgattgaagag
aagctgaaactggaagaagaacagcagcaaaaaaaacactcctctgtaatgccacccgaagtggtccggttgaatatccc
acatctggagaaggagaaaaaacagggacctcttaacaaggatattgcaagtcttaagggacaagaaaaggtgcggaaaa
gttctgtggacctaagaaaggagatccttgaatttggtggcaccgaatacctcttcaaactacagaaaaaagcaaaaaag
gaggagaagaaaccagagcctgaaccagaggaaattactgggcctgtggcagtggaggattttttgaaagccgccgtgca
gggccggatacaagttgtggagaagttcctggtagatggaggctccccagacagctgtgatgaattccacaggacagctt
tgcatcgtgcctccctggaagggtacacagaaattgtagagaaggttttggaccgaggtgccactattgacttcagagat
cgcttggattgcacagctttgcactgggcctgtcgtggtggacacctggctgttgtgaagctcttgcaggaaaaaggggc
taatctaaagttgaaggacaagcttctcagtacacctttacatgtggccactcgcactggtgtagcagatgttgtggaac
atctgataaacaatggcgtggatgtcaattctcgtgaccgtgagggagacagtgccctgcatgatgctgtacgcctcaat
cgctacaagataattaagatgttgattttgcatggggcagatatgttggccaaaaatctggctggcaaaactcctgcaga
tctggtgcagttatggcaggcagatacacgggaagtgctggaaaagaaagagccaaacacaacagaaatgccaacatgag
atgtagttggatgaacaaagcagacactcacaattcaaagcaagaatagtttgagattaaataaatgtggtcacaaaacc
ccaataaagatgcaatcaaaacaaaacaaa
Transcript IDhabu1_s1341_g04752.t2
Definition-
>habu1_s1341_g04752.t2
ggtcgccaagcaaggctgtccgccattttttcccccttttccagcgggtgccttacctcccttgggctgggccagctggt
ggttggcctgctccgtgtctgccgcttgccagctacgcctcggccgacacagggggcggaaccacgcatgcgcagcgctc
ccgggcaggaaaagtcctcgacttacgaccggttgggtagtcctcgacttacgaccggtttagtcctcgacttacgaccg
ttttcagcttctagttttcccttgctgagcaaggaatgtcgtaatgaacctctaaaaaaggatcgtcccaaatggaagag
tgattatccaatgacggatgggcaactaagaagcaaacgggatgaattttgggatacagcccctgcctttgagggacgca
aagagatttgggatgcactcaaggctgccgcctatgctgtggaggcaaatgatcatgggctagcacaagccattattgat
ggtgctggagttaccttgcctcatggctcacttactgagtgctatgatgaattgggtaaccgataccaacttcctgtata
ttgcctggcaccacctattaacttgattatggagtggagtgaagaggagggtgcagaacctccagagccagcacccaata
cccgccgacaaacaaagatggatatggaccacaagataaaaagggcaacggagctgattgaagagaagctgaaactggaa
gaagaacagcagcaaaaaaaacactcctctgtaatgccacccgaagtggtccggttgaatatcccacatctggagaagga
gaaaaaacagggacctcttaacaaggatattgcaagtcttaagggacaagaaaaggtgcggaaaagttctgtggacctaa
gaaaggagatccttgaatttggtggcaccgaatacctcttcaaactacagaaaaaagcaaaaaaggaggagaagaaacca
gagcctgaaccagaggaaattactgggcctgtggcagtggaggattttttgaaagccgccgtgcagggccggatacaagt
tgtggagaagttcctggtagatggaggctccccagacagctgtgatgaattccacaggacagctttgcatcgtgcctccc
tggaagggtacacagaaattgtagagaaggttttggaccgaggtgccactattgacttcagagatcgcttggattgcaca
gctttgcactgggcctgtcgtggtggacacctggctgttgtgaagctcttgcaggaaaaaggggctaatctaaagttgaa
ggacaagcttctcagtacacctttacatgtggccactcgcactggtgtagcagatgttgtggaacatctgataaacaatg
gcgtggatgtcaattctcgtgaccgtgagggagacagtgccctgcatgatgctgtacgcctcaatcgctacaagataatt
aagatgttgattttgcatggggcagatatgttggccaaaaatctggctggcaaaactcctgcagatctggtgcagttatg
gcaggcagatacacgggaagtgctggaaaagaaagagccaaacacaacagaaatgccaacatgagatgtagttggatgaa
caaagcagacactcacaattcaaagcaagaatagtttgagattaaataaatgtggtcacaaaaccccaataaagatgcaa
tcaaaacaaaacaaa
Transcript IDhabu1_s1341_g04752.t3
Definition-
>habu1_s1341_g04752.t3
ggtcgccaagcaaggctgtccgccattttttcccccttttccagcgggtgccttacctcccttgggctgggccagctggt
ggttggcctgctccgtgtctgccgcttgccagctacgcctcggccgacacagggggcggaaccacgcatgcgcagcgctc
ccgggcaggaaaagtcctcgacttacgaccggttgggtagtcctcgacttacgaccggtttagtcctcgacttacgaccg
ttttcagcttctagttttcccttgctgagcaaggaatgtcgtaatgaacctctaaaaaaggatcgtcccaaatggaagag
tgattatccaatgacggatgggcaactaagaagcaaacgggatgaattttgggatacagcccctgcctttgagggacgca
aagagatttgggatgcactcaaggctgccgcctatgctgtggaggcaaatgatcatgggctagcacaagccattattgat
ggtgctggagttaccttgcctcatggctcacttactgagtgctatgatgaattgggtaaccgataccaacttcctgtata
ttgcctggcaccacctattaacttgattatggagtggagtgaagaggagggtgcagaacctccagagccagcacccaata
cccgccgacaaacaaagatggatatggaccacaagataaaaagggcaacggagctgattgaagagaagctgaaactggaa
gaagaacagcagcaaaaaaaacactcctctgtaatgccacccgaagtggtccggttgaatatcccacatctggagaagga
gaaaaaacagggacctcttaacaaggatattgcaagtcttaagggacaagaaaaggtgcggaaaagttctgtggacctaa
gaaaggagatccttgaatttggtggcaccgaatacctcttcaaactacagaaaaaagcaaaaaaggaggagaagaaacca
gagcctgaaccagaggaaattactgggcctgtggcagtggaggattttttgaaagccgccgtgcagggccggatacaagt
tgtggagaagttcctggtagatggaggctccccagacagctgtgatgaattccacaggacagctttgcatcgtgcctccc
tggaagggtacacagaaattgtagagaaggttttggaccgaggtgccactattgacttcagagatcgcttggattgcaca
gctttgcactgggcctgtcgtggtggacacctggctgttgtgaagctcttgcaggaaaaaggggctaatctaaagttgaa
ggacaaggagggagacagtgccctgcatgatgctgtacgcctcaatcgctacaagataattaagatgttgattttgcatg
gggcagatatgttggccaaaaatctggctggcaaaactcctgcagatctggtgcagttatggcaggcagatacacgggaa
gtgctggaaaagaaagagccaaacacaacagaaatgccaacatgagatgtagttggatgaacaaagcagacactcacaat
tcaaagcaagaatagtttgagattaaataaatgtggtcacaaaaccccaataaagatgcaatcaaaacaaaacaaa

Protein
Protein IDhabu1_s1341_g04752.t1
Definition-
>habu1_s1341_g04752.t1
MGSCVGRQRREGPITPGNPRKRAGRNEPLKKDRPKWKSDYPMTDGQLRSKRDEFWDTAPAFEGRKEIWDALKAAAYAVEA
NDHGLAQAIIDGAGVTLPHGSLTECYDELGNRYQLPVYCLAPPINLIMEWSEEEGAEPPEPAPNTRRQTKMDMDHKIKRA
TELIEEKLKLEEEQQQKKHSSVMPPEVVRLNIPHLEKEKKQGPLNKDIASLKGQEKVRKSSVDLRKEILEFGGTEYLFKL
QKKAKKEEKKPEPEPEEITGPVAVEDFLKAAVQGRIQVVEKFLVDGGSPDSCDEFHRTALHRASLEGYTEIVEKVLDRGA
TIDFRDRLDCTALHWACRGGHLAVVKLLQEKGANLKLKDKLLSTPLHVATRTGVADVVEHLINNGVDVNSRDREGDSALH
DAVRLNRYKIIKMLILHGADMLAKNLAGKTPADLVQLWQADTREVLEKKEPNTTEMPT
Protein IDhabu1_s1341_g04752.t2
Definition-
>habu1_s1341_g04752.t2
MRSAPGQEKSSTYDRLGSPRLTTGLVLDLRPFSASSFPLLSKECRNEPLKKDRPKWKSDYPMTDGQLRSKRDEFWDTAPA
FEGRKEIWDALKAAAYAVEANDHGLAQAIIDGAGVTLPHGSLTECYDELGNRYQLPVYCLAPPINLIMEWSEEEGAEPPE
PAPNTRRQTKMDMDHKIKRATELIEEKLKLEEEQQQKKHSSVMPPEVVRLNIPHLEKEKKQGPLNKDIASLKGQEKVRKS
SVDLRKEILEFGGTEYLFKLQKKAKKEEKKPEPEPEEITGPVAVEDFLKAAVQGRIQVVEKFLVDGGSPDSCDEFHRTAL
HRASLEGYTEIVEKVLDRGATIDFRDRLDCTALHWACRGGHLAVVKLLQEKGANLKLKDKLLSTPLHVATRTGVADVVEH
LINNGVDVNSRDREGDSALHDAVRLNRYKIIKMLILHGADMLAKNLAGKTPADLVQLWQADTREVLEKKEPNTTEMPT
Protein IDhabu1_s1341_g04752.t3
Definition-
>habu1_s1341_g04752.t3
MRSAPGQEKSSTYDRLGSPRLTTGLVLDLRPFSASSFPLLSKECRNEPLKKDRPKWKSDYPMTDGQLRSKRDEFWDTAPA
FEGRKEIWDALKAAAYAVEANDHGLAQAIIDGAGVTLPHGSLTECYDELGNRYQLPVYCLAPPINLIMEWSEEEGAEPPE
PAPNTRRQTKMDMDHKIKRATELIEEKLKLEEEQQQKKHSSVMPPEVVRLNIPHLEKEKKQGPLNKDIASLKGQEKVRKS
SVDLRKEILEFGGTEYLFKLQKKAKKEEKKPEPEPEEITGPVAVEDFLKAAVQGRIQVVEKFLVDGGSPDSCDEFHRTAL
HRASLEGYTEIVEKVLDRGATIDFRDRLDCTALHWACRGGHLAVVKLLQEKGANLKLKDKEGDSALHDAVRLNRYKIIKM
LILHGADMLAKNLAGKTPADLVQLWQADTREVLEKKEPNTTEMPT

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