Gene
| Gene Model ID | habu1_s1341_g04753 |
|---|---|
| Locus | habu1_scaffold1341 : 112746 ... 148324 : + |
| To GenomeBrowser | habu1_scaffold1341:112746..148324 |
| Genes list of scaffold | habu1_scaffold1341 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| mms19 nucleotide excision repair partial | GO:0003713 GO:0005634 GO:0005667 GO:0006281 GO:0007059 GO:0007165 GO:0016020 GO:0016226 GO:0030331 GO:0045893 GO:0045941 GO:0071817 GO:0097361 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1341_g04753.t1 | 1 | 1 | MMS19_N | 44 | 305 | 0.0 | 315.8 | 0.0 | 0.0 | 310.5 |
| habu1_s1341_g04753.t1 | 1 | 1 | MMS19_C | 525 | 951 | 0.0 | 351.3 | 0.0 | 0.0 | 351.3 |
| habu1_s1341_g04753.t1 | 1 | 1 | HEAT_2 | 903 | 1006 | 2.9e-06 | 27.4 | 3.4e-06 | 0.01 | 16.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s1341_g04753.t1 | gi|602625986|ref|XP_007419956.1| | PREDICTED: MMS19 nucleotide excision repair protein homolog isoform X1 [Python bivittatus] | 0.0 |
| habu1_s1341_g04753.t1 | gi|602625988|ref|XP_007419957.1| | PREDICTED: MMS19 nucleotide excision repair protein homolog isoform X2 [Python bivittatus] | 0.0 |
| habu1_s1341_g04753.t1 | gi|637366741|ref|XP_008121269.1| | PREDICTED: MMS19 nucleotide excision repair protein homolog [Anolis carolinensis] | 0.0 |
| habu1_s1341_g04753.t1 | gi|543352127|ref|XP_005520918.1| | PREDICTED: MMS19 nucleotide excision repair protein homolog [Pseudopodoces humilis] | 0.0 |
| habu1_s1341_g04753.t1 | gi|529438646|ref|XP_005239076.1| | PREDICTED: LOW QUALITY PROTEIN: MMS19 nucleotide excision repair protein homolog [Falco peregrinus] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 4.0 |
| Venom grand-1 | 5.3 |
| Pit, infrared sensing | 5.0 |
| Nose | 4.0 |
| Brain-1 | 3.8 |
| Eye | 4.6 |
| fetal fibroblast | 5.0 |
| venom gland-2 | 4.5 |
| Brain-2 | 3.1 |
| Spleen | 4.9 |
| Lung | 3.6 |
| Liver | 7.1 |
| Kidney | 12.2 |
| Pancreas | 8.2 |
| Small intestine | 4.6 |
| Large intestine | 7.2 |
| Stomach | 6.6 |
| heart | 5.0 |
| ovary | 6.7 |
| cheek muscle | 6.7 |
Transcript
| Transcript ID | habu1_s1341_g04753.t1 |
|---|---|
| Definition | - |
>habu1_s1341_g04753.t1 attgccggcaatggggtgggcgcggctttcggataatgcgtccggcccgcgggccggcagtttgacacccctgcactagg caaaattaaatccacaatacaagaggatgttatcatggcggccggaggggctcacgttggcataggaaaacctgcctccc tgttacaggactgggaatgggaaaacgcggccaggcagacggcggaaggagtaaagactggaacatgctccattttagat gtagtggaaatcttgggaactcctctgaagaatgaagatcctcaagtgcgggcacagggcattcaggttctctctgaggt cctcctacagtgttattccctcctccaagagcaggaagtgacccaccttgtcttgttctacgagaaccgtctaaaagata atcaccttgttattccttctgtgctgcagggactgaacgctttgagcaaatgtgtagtgttagctccaggactggcagtg tctgttctcaaagctgtcttccaggaagttcacgttcagtctttgttacagttaaatcgtcatactgtctatagtatcat cactaatttcatgagcaacagagaggcagagctaaaaggtttaggtgctgatttcaccttgggcttcatccaagtgatgg atggagagaaagatccacgcaacctgttaatagctttccagattgttcgagacatcattgtaaaaggctatgcaataggg cctttttcagaagagctatttgaagtgacttcctgctacttccctattgactttactcctccctccaatgatcctcatgg aatccagagagaagacctgattttcagtctgcgggcagtgctgacctctacccccgtttttgctgagttcctacttccgt tgctcattgagaaaatagactcagatgtacaaagtgccaagctggattccttgcagacgctgattgctgcatgcaagatc tatgggcataaagaactgaaagaattcctccctagcctttggtcatctttgcgcacagaagtcttccagacagcaagtga gaagatagaagcagaatgcttgtctgctttgcgagctctgtcagcgtgtctgtcccgtttggtgcttggaactgatgagg aggatcttctggattccttccttaggggagttctgcaagattgcagacaccatctgtgtgagcctgacatgaaactggtg tggccaagcgctaagctcttgcaggcagttgcaggagcttctttgcgggcttattatcagatcacaagtagtgtacttcc tttgctgttggaacagtatgccaagcatgaacagagtagtcagcacaggacagtcttggaggtgttgtttggtttcttgg agttacggcaaatgtggggtcctgaggaggaagacaaaagtccactgctttcttgcaaagactctctgtgttctatagta ttctctgccttagctgagcccaatattcaacttcaattggttgggatccagattctgacatttctaggatctcgtcaaga gcttctagatcttgcagatgtggaaaagcttgcagatcactttgcacagttcatcctgaatgaaatggattcccagatca gtttggcagctatggatgctgccggcacccttgctcctgtctacccagaaatcttcagcaagtgtttggttcaaaagctt tcaaaaggactggactcagaacttcaggacaatatttcatcccatcagaaacatctacaagctctggcagcagtgtccac ccatccaagtattgtaaggcaaactgttcctgtctttttgcaacatctccagcagattcagaaaggcaaaatgccagcaa gtaataattcagtggtatctgtgtgccacagcttgcaacaggtcgcccttcagtgccagcaaaatgttcagacatattgg tacttccatcaggcggtggtgccctgcttgctaggcttagcagtgcaggctgctttggaagaaaattctcaaacaacacc caacaaagttctgctaacagaagaagctttatcatccatggtgttagtcatcagtgcagcctgcatgcacttaagcccag agttggctgctcagagtgtgtcaaaagtggtacctctcttcctagatggagaactttccttcttgactggaaacaactat ctcagctcttttcagccctttcaggatgggctacatccagcagcagccccaagaagactggttgctctccttatggcctt tgtatgttcactgccaagaacagtggtaattcctcaacaggatcggttgttgcgtgagctactagctcttagctgttcct gtgactgcccattcactgctactgctgctgcaaaatgctttgcaggactgattaacaaatacccagaaggggcacactta gatcagctcttggaaatggccataaaaatgctagaacgaggcttgaatgaaggtccctatcaacgccaggcccttactct gctgttgtgggtgagtaaagcattgctgctacgctaccacccattaatcacacagctgactgacaagctcctccagcttt tgggggatactgttcttggccctgcagtgggtgatggctttgccttgctcatggctgattctactgatgtattgggcaag agctgtcatgcggaggtgcgcctgatgttccgccagcgcttcttcacagattgtgtgccacagttggtgcaaagtttcca cacatccactcctgatgtgaaaccaaattacctgaaaggcctgtctcacatattaaatcacttgcccaagccagtgctag tgacagagctgcctacattgctgcctctgttgctagaatctctgtcatgtcctgaccatgtggtgcagctttcaacttta cgttgcgtacagccattgctacttgatgcacctcatgctatgcatctccacatcaacacacttgtgtgcaagtttcttaa cctaacagacaaccctgccatggcaatccgtattgctgcacttcaatgcctccatgcacttgcctccttacctaccccag tggtgatcccattcaagccacgagtcattcgcgcattggccaagcctttggatgacaaaaagcgccttgtacgtaaagaa gctgtcatagcacgaggagaatggtttctgcttgggacacctggcaggtgaaacatcactctgtgaatcccgattgacaa tcttttgtgcagtttgccttggaccacttttcttgcagttcagcaaagctttggacaaaaatggaggagtttccttcctt ttttaggagtgggctgccttttctataggctgctggaatcctaaacacagtggttgcaaccctcaagccttactttttac tgcagtgcagtatggcatagaggtagcagaatctcctgcctgcaataggtggggttagaaaaataaataacccatttgtt gaaagcttctggagaagatgcctcttaagggaaagacattgagcaaagtgagttcacttctgctattcttcatcatgctt cataattcttatattcctcttttagtggtataaaaattaaccactataaatcatagctaatatctattagaggaattcaa acaattttcatttataataattttatacacatgaagtgcatgtagtcataaaataaattattacaatttggggtaattat gaaattcagaattattctaaatacaaatgtgaagaactatggaaagggttacttagacagttgtttagctatcttgggta gctacattttgagaaaatataaagtgctgaaagcagatgtaaggttcatttagagtgctgagagtataatatgattgaca ataggaatgtggtattctataaaacaccaatttaccaactatacattgccacttgctgtccctgcttatctttttttttg gggggggggtttaataagttgaatactttaggaaacaaaagtgctgggctgaaactactcatttttattctctaagaata cttttggagctgaaaaatgatactggaaataaaaatggtgaagcctgtttcttggctgtaagctagtctcccatttattt taataaaaattacctgaaataattgaaataaagcagggaggatggtaagggaggtgtgagtataatatcatccaccatgc taatttgaacagttccaagctagtttagtatttagccatcaggatgaaactcttgtttagatgtaaaattggcaacatct aatccctttcttatattagtgctgtttttataaagtacaaatatagtattccacctagatttttatgaagcatttcctat tcaatctaattttgaaaatccttaacagtgggatactcccctgctgtaaaagacactgttaagaaacaggttttcttgat ttagtactgttgaaggacatctcatcaatgaatatagcagaactgcaacagaacatggataagaatagatcactgcacag tgatcacgatagtgaatactactgtgagtattaggaaaaagctgtactttacaagagtaaaagatattggaatataaagc tgggaaggactgctgaaaagttctgtttaaaagaccacaccatttcaactgggtttttttttcttaaaataatatttaga tgttcggttcattgaacatagatcagttaataaattgtggggctccaggcttaaatgcttgactatttggtttcaatact ctgaattaactgcttatctggtgcttttttatataaatagttggagaaatgcaaggccattctggctaactgggatgtgt aatttttgctataaaaagagttgggatactagccaatagtgccatgttctgattattagtgtactatattagtgaaggtt taactaggtcagatccgatacagatttctgcctattgggaaaaggataactctagactcctgtctctttaaataaccttg ttaagtgtgttatagaaacatacatgttctagagctgcagctgaattggcaagaactattgccaatcaatgtagaaacaa taatttatcccactgactggaaaaacaacttgttgaatatagcctggatagagattggtaatgaacatgttgcttagtat caatgctgcttgctgcttgaaataactattgaatcagaagtcagcattaaaagtaaagaattactattttttt |
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Protein
| Protein ID | habu1_s1341_g04753.t1 |
|---|---|
| Definition | - |
>habu1_s1341_g04753.t1 MAAGGAHVGIGKPASLLQDWEWENAARQTAEGVKTGTCSILDVVEILGTPLKNEDPQVRAQGIQVLSEVLLQCYSLLQEQ EVTHLVLFYENRLKDNHLVIPSVLQGLNALSKCVVLAPGLAVSVLKAVFQEVHVQSLLQLNRHTVYSIITNFMSNREAEL KGLGADFTLGFIQVMDGEKDPRNLLIAFQIVRDIIVKGYAIGPFSEELFEVTSCYFPIDFTPPSNDPHGIQREDLIFSLR AVLTSTPVFAEFLLPLLIEKIDSDVQSAKLDSLQTLIAACKIYGHKELKEFLPSLWSSLRTEVFQTASEKIEAECLSALR ALSACLSRLVLGTDEEDLLDSFLRGVLQDCRHHLCEPDMKLVWPSAKLLQAVAGASLRAYYQITSSVLPLLLEQYAKHEQ SSQHRTVLEVLFGFLELRQMWGPEEEDKSPLLSCKDSLCSIVFSALAEPNIQLQLVGIQILTFLGSRQELLDLADVEKLA DHFAQFILNEMDSQISLAAMDAAGTLAPVYPEIFSKCLVQKLSKGLDSELQDNISSHQKHLQALAAVSTHPSIVRQTVPV FLQHLQQIQKGKMPASNNSVVSVCHSLQQVALQCQQNVQTYWYFHQAVVPCLLGLAVQAALEENSQTTPNKVLLTEEALS SMVLVISAACMHLSPELAAQSVSKVVPLFLDGELSFLTGNNYLSSFQPFQDGLHPAAAPRRLVALLMAFVCSLPRTVVIP QQDRLLRELLALSCSCDCPFTATAAAKCFAGLINKYPEGAHLDQLLEMAIKMLERGLNEGPYQRQALTLLLWVSKALLLR YHPLITQLTDKLLQLLGDTVLGPAVGDGFALLMADSTDVLGKSCHAEVRLMFRQRFFTDCVPQLVQSFHTSTPDVKPNYL KGLSHILNHLPKPVLVTELPTLLPLLLESLSCPDHVVQLSTLRCVQPLLLDAPHAMHLHINTLVCKFLNLTDNPAMAIRI AALQCLHALASLPTPVVIPFKPRVIRALAKPLDDKKRLVRKEAVIARGEWFLLGTPGR |
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