Gene
| Gene Model ID | habu1_s1341_g04755 |
|---|---|
| Locus | habu1_scaffold1341 : 158576 ... 164957 : + |
| To GenomeBrowser | habu1_scaffold1341:158576..164957 |
| Genes list of scaffold | habu1_scaffold1341 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| exosome complex component csl4 | GO:0000178 GO:0003723 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1341_g04755.t2 | 1 | 1 | EXOSC1 | 9 | 80 | 2.8e-26 | 91.2 | 6.8e-30 | 5.1e-26 | 90.4 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 13.6 |
| Venom grand-1 | 20.6 |
| Pit, infrared sensing | 15.5 |
| Nose | 14.9 |
| Brain-1 | 7.0 |
| Eye | 11.8 |
| fetal fibroblast | 29.7 |
| venom gland-2 | 17.6 |
| Brain-2 | 6.9 |
| Spleen | 12.6 |
| Lung | 8.1 |
| Liver | 16.0 |
| Kidney | 11.0 |
| Pancreas | 16.8 |
| Small intestine | 13.7 |
| Large intestine | 9.9 |
| Stomach | 9.5 |
| heart | 9.5 |
| ovary | 38.3 |
| cheek muscle | 18.4 |
Transcript
| Transcript ID | habu1_s1341_g04755.t1 |
|---|---|
| Definition | - |
>habu1_s1341_g04755.t1 ctgcgcgctactgtgttcctggagagcagctctgcagtttggaagaaggaacccctgggaatggcacctatacacgtcat ggttctatctttgcctctctggctggttgtttcatgaagaaaagtgagaatggcacgctcccggtaatctctgtgatgag agatgtggaatctcagctactgcccgatgtgggagccatagtgacctgcaaggtttgcagtattaattctcgttttgcca aggtgcatattttatatgttggttctacaccattaaaatccccattccgtggaacaatacgcagagaagatatccgagct acagagaaagacaagatagaagtttacaagagtttccggccaggagatattgttttggccaaagttatctctttagggga tgtacaatcaaattatttgctgaccacagcagaaaatgagctaggagtagtagtggctcacagtgaagcaggtgtacaga tggtgccaataagctggtgtgaaatgcaatgtcccagtacacatggcaaggagctgcgcaaagtagcccgtgttcagcct caatttctgcagacatagtgaaagatgcatacaccaaagcatacgactggtagcaggaaagattaatcctaggaaaagaa ccagaggaacttgaaagaaaaaagaaagcaacttcaagaattgttgcagagctttttagcaaaggacattatgattagaa ctttttactttcaatttggcaacctaattttgttttgtaattcagaaaactttctactctacctttaattgaagcagcta aactctgctttagaaaagcaaaaagacaagaaaacaatccataaaggctgcctgcctgcattttcccttgtaaattacaa gtcattggcctgcccaggaagtaagcctaaatcaatatccgtttctcttgaaatatactttaattgcaagcccttttaaa tctcaagttatcacagtatcacaaaaaaatggaataaaaactaggaacttgactgaaaaaaatgttaaagctatattttg actaaactactgaggcagtctatacagtggcactcagtcaacctctggcatatgaaattatgcaatgctgcatcttttga cagtatataatatgatagtgagatatgcagagtcccaaataatgcatttttcagcatctttctggtgcttaaactttgga attgtttccagaggtgaatgcaaaacagatattcttgaccatgatttttttttaataaaatcccacatcaaaatgtttgc c |
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| Transcript ID | habu1_s1341_g04755.t2 |
| Definition | - |
>habu1_s1341_g04755.t2 tccttggttgtagagctaatttcctgggccagctccagagagtcttgtgggtgaaatgtctggcgtttgcttcagcccca gagcgagaagaggctgaatttggggctgggagagcagctctgcagtttggaagaaggaacccctgggaatggcacctata cacgtcatggttctatctttgcctctctggctggttgtttcatgaagaaaagtgagaatggcacgctcccggtaatctct gtgatgagagatgtggaatctcagctactgcccgatgtgggagccatagtgacctgcaaggtttgcagtattaattctcg ttttgccaaggtgcatattttatatgttggttctacaccattaaaatccccattccgtggaacaatacgcagagaagata tccgagctacagagaaagacaagatagaagtttacaagagtttccggccaggagatattgttttggccaaagttatctct ttaggggatgtacaatcaaattatttgctgaccacagcagaaaatgagctaggagtagtagtggctcacagtgaagcagg tgtacagatggtgccaataagctggtgtgaaatgcaatgtcccagtacacatggcaaggagctgcgcaaagtagcccgtg ttcagcctcaatttctgcagacatagtgaaagatgcatacaccaaagcatacgactggtagcaggaaagattaatcctag gaaaagaaccagaggaacttgaaagaaaaaagaaagcaacttcaagaattgttgcagagctttttagcaaaggacattat gattagaactttttactttcaatttggcaacctaattttgttttgtaattcagaaaactttctactctacctttaattga agcagctaaactctgctttagaaaagcaaaaagacaagaaaacaatccataaaggctgcctgcctgcattttcccttgta aattacaagtcattggcctgcccaggaagtaagcctaaatcaatatccgtttctcttgaaatatactttaattgcaagcc cttttaaatctcaagttatcacagtatcacaaaaaaatggaataaaaactaggaacttgactgaaaaaaatgttaaagct atattttgactaaactactgaggcagtctatacagtggcactcagtcaacctctggcatatgaaattatgcaatgctgca tcttttgacagtatataatatgatagtgagatatgcagagtcccaaataatgcatttttcagcatctttctggtgcttaa actttggaattgtttccagaggtgaatgcaaaacagatattcttgaccatgatttttttttaataaaatcccacatcaaa atgtttgcc |
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Protein
| Protein ID | habu1_s1341_g04755.t1 |
|---|---|
| Definition | - |
>habu1_s1341_g04755.t1 MRDVESQLLPDVGAIVTCKVCSINSRFAKVHILYVGSTPLKSPFRGTIRREDIRATEKDKIEVYKSFRPGDIVLAKVISL GDVQSNYLLTTAENELGVVVAHSEAGVQMVPISWCEMQCPSTHGKELRKVARVQPQFLQT |
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| Protein ID | habu1_s1341_g04755.t2 |
| Definition | - |
>habu1_s1341_g04755.t2 MRDVESQLLPDVGAIVTCKVCSINSRFAKVHILYVGSTPLKSPFRGTIRREDIRATEKDKIEVYKSFRPGDIVLAKVISL GDVQSNYLLTTAENELGVVVAHSEAGVQMVPISWCEMQCPSTHGKELRKVARVQPQFLQT |
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