Gene
| Gene Model ID | habu1_s1341_g04757 |
|---|---|
| Locus | habu1_scaffold1341 : 176916 ... 200643 : + |
| To GenomeBrowser | habu1_scaffold1341:176916..200643 |
| Genes list of scaffold | habu1_scaffold1341 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| rrp12-like protein | GO:0005730 GO:0044822 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1341_g04757.t2 | 1 | 1 | NUC173 | 472 | 670 | 0.0 | 239.7 | 0.0 | 0.0 | 232.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s1341_g04757.t2 | gi|683904291|ref|XP_009085498.1| | PREDICTED: RRP12-like protein isoform X1 [Serinus canaria] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 8.5 |
| Venom grand-1 | 18.7 |
| Pit, infrared sensing | 11.0 |
| Nose | 8.6 |
| Brain-1 | 7.6 |
| Eye | 8.9 |
| fetal fibroblast | 24.5 |
| venom gland-2 | 23.8 |
| Brain-2 | 8.1 |
| Spleen | 16.6 |
| Lung | 8.5 |
| Liver | 26.5 |
| Kidney | 27.8 |
| Pancreas | 36.2 |
| Small intestine | 17.3 |
| Large intestine | 9.9 |
| Stomach | 18.9 |
| heart | 15.7 |
| ovary | 42.6 |
| cheek muscle | 39.7 |
Transcript
| Transcript ID | habu1_s1341_g04757.t1 |
|---|---|
| Definition | - |
>habu1_s1341_g04757.t1 acggaagtggataaccggaactacttaaaatagagtaacgtagactcggcacgtggtttgggtcttttgctttggcgagc cgttgtggcgagaaccgagcgaaatgggtcgttcgggcaagttgcgctctggtacagccggtaaacttaagcgttggcgc aaagggcacagcagcgatagcaatccggagggacgacgttaccgcctggccgcccgtggtcgtctactggccccccggtc agaaaacagtaacctgactgtagatgccttgaaactacacaatgaactgcagtcatcaggacctgtgtctagagagaatg caaagtcttttgtggtggaagataacagtgaatctgctaagactcacaaatcatctgcaactttcctgagtggcttgact gactgtactaatctcaccttcagcagagtgcagcgtctttgggaatccaattctgctgcccataaggagatatgtgcagt attggcggcagtcacagaggtaatccgaacacagggtggtacagaaagtgagacagagtattttggtgtcttgatgacta ctctggaagctgtggaatctcctgaatccctggctgctgttgcttatctgttaagtttagtgttgaagcgtgtacccagc cctgtgttgatcaaaaagttctccgatacgtccaaggcttttatgggaattctgggctcacaagcttgtggagactctaa tttggctctacgatgggtcctttcctgtctagctacattgctgcaaagacaaaatctgataacatggaattaccctgtga caatgcaagtttttcatggtcttctcagcttcactgtccatgtcaagcccaaagtccgcaaggctgctcagcatggtgtt tgctctgtcctcaggggtagtgaattcctgtttggagatggagctcctttacatcacccagctgcaatttctactgctaa gttctgcattcaacaaattgagaaatctggaggtgctaaggaggccacaacaactttgcatatgctgactctgctgcgtg atttattgccttgttttcctgctccagctgtcaaatcttgctctgaaaccttgcttcgagttatgaccctcagccatgta ctagtgacagcatgtgctatgaaagcttttcatagtctctttgctgcccattcatctccagtgtgtctgccagctgaact taatgcccagattatcatggctctttatgactatgtacccaatgagaatgacttgcagcctctgttggcctggctggctg tcatggaacgggcacatgttaacctagcgaagctgcagtgggatctgtgctgggctcatcttcctcgtctcttcagcgta gctatgaactgtttcctgtctcctcacagccaggtggtggatgctgccgcccagaccctaatggttttgctcaatgaatg tgtggcccctcaagtgacagaactaggacttgtttcatccgcaactccgtctggatctgctgctcagatttgcaagatgt tcagagcagtggaagaaggtctgacataccagtaccatgcagcttgggcctcggtgttgcaagtgctgagggttttcttt gaagcatgtgggcagcagtgtcatcctataatgcaaaagtgtctacagtccctagctgatctgcgtagctcctctcactt tccccacactgtgttgcttgatcagactctgggggccgcagtggccaccatgggccctgaaatggtgctggaggctattc ccctagatattgatggcacagaggagacactggattttcctcgcagttggctccttcctgtgctccgagaccacatccaa agtgcaccacttgcttttttctccagtcatttcctgccacttgctgctgctttaaaaaacagagccacagagcttgccca ggcaggtcaggatttagaagctaagatctacaatacactccagtggcaaatctggaccttgctgcctagtttctgcagcc atgctacagatgtggtactctcattcaaaggactggcacgcactctaggcacggccattaacgactgttctgaactgcag cagatagtgtgccaagctttgcgcaggctaattaataagggctgccaaactgagcctgagcgtgctgaagttgggcgctt tgcaaagaactttctgcccatcatgttcaatgtatacagccaagagggtgatgatagtgagagctcagtgcaccggcgct ctttgctggacaccatccgagcctacttgacagttactgaagcagggctggtgaattccttcctggagaaagcttgtgag aaactgatcagttctgatagttcagaattcactaggctttctattttagatcttgtggtcactatggctccctatgctga tgagtcatctctgcatgctctgtatggcagcatctactcctccctgcaaaacaaagatcatagaatacagaaaaaggttt atcgagtgctagaggaagtgtgtgcctctgaccaacctgcgtgtcaaaattttgttcaaagtcatttggaggaactgaag agtgctctgttggactccctaaccagggcaacttcacctgccaagagaccccgtctgaagtgcctcttccatgttatcaa acaactgacagtggaacatgaagattttgtcacagccctggtgccagaggttatcctttgcaccaaagaagtctctgtgg gggcccgcaaaaatgcttacaatctgttggtagaaattggtcacacttttatacgctttggtctcactccaaatgaggga atacagcgttatctcctcctgatctatgcaggcttaactggctctgtcactatgatcagctgcactgtgcttgctcttac ccgtctactgtatgagttcaaagaacatattgggtcagatgccctcgagcagctggtgaaacatgtttgcctcatgatag gctcacgtactcgggatgttgtcaaatcagctctaggattccttaaagtgacagtcctgctcttggacgcaacattgctg ggtcggcacttggagactatgttagaagccattggacgattgacagatgacatgaggcgccactttcgtatgaagctgcg aaatctcctttccaaattgatccggaaatttgggttcgagcccttgcaggctctgcttcctgaatcatatcacaaagtac tgcttaatattcgtaaggcagaatcaagaaaccgcaagagacaagctgtgaaaagagctgcagccacttctgcagaagaa gaaaaaacattagcaccatctaagggagacagcattgaggatgtcttggcagactcagattctgatctagaagatgagac cggcaaacaaaaaggaagaacgagtaggaaagtgcgaaggcaacaaaaccaagcttggcttaaggagggagaaagtgatg aacccctcaacttcttggatccaaatgtggcacacagggtgttagctaccaggccaggcactgcccaaactggaaaagtt aaacatgatttcaaattatcagctgatggtcgcttaatcatatgtgaagaggaagaagaacctacaggactgaatgagga gtcagcagagttaatgcaggaagttggaatcaagaataaaaagactcggaaacgtcgatttcgggaagaggcagatgatg aagggcttgctgctgatacacagccacaatacaaagcagggggcaaaggaattcatcggcctgttagcaagaatgcagca cctggggcagagtacaaagcaaagaaaggcaaaggtgacatcaagaaaaaaggtgggctcgatccttacgcatacatccc actgaacagagcaaaactaaaccggaggaagaaagccaaacttcaaggacagtgcacgaatctgatgaagggagctcagc gtggtgcccaagcaggcaagagactcttcaaaaagcaggcccatacctgaaggagaaaaggccactcagaatttacctgg aaagcagtccctttatgtcattgggctgtggatcttgttgctgctattccacggtctgagttaattcctaaaaaatggaa tttgctcgttattcctgcatattggctatacatattattttcagcaaaaaaagtagtaaaaaatgtatacatcctccctt ttgttatttatggatccttgtaataggggttttcttgccagttgttactctggttccttccacagctatgagcagtgtga gcaaatctagaactttgggtaagagactgattattgcttcccaatgaacacctgagcaattcatagtataataaattctg tttcttcagtataatataggcactggatctgtgaaacctgcttttctgtctattgtctttctctatttgaagcaacttgt ttatttggtaacaactacaaattctctaagaagtctagatttatttggtagtaggtaagaacaaatgattcatagtaata aaaacaaaagaaaggaattattatttccaaggaaaacttagagcggtgaataatgatcttagcttctgaataaaagttct actggtacttctattg |
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| Transcript ID | habu1_s1341_g04757.t2 |
| Definition | - |
>habu1_s1341_g04757.t2 acggaagtggataaccggaactacttaaaatagagtaacgtagactcggcacgtggtttgggtcttttgctttggcgagc cgttgtggcgagaaccgagcgaaatgggtcgttcgggcaagttgcgctctggtacagccggtaaacttaagcgttggcgc aaagggcacagcagcgatagcaatccggagggacgacgttaccgcctggccgcccgtggtcgtctactggccccccggtc agaaaacagtaacctgactgtagatgccttgaaactacacaatgaactgcagtcatcaggacctgtgtctagagagaatg caaagtcttttgtggtggaagataacagtgaatctgctaagactcacaaatcatctgcaactttcctgagtggcttgact gactgtactaatctcaccttcagcagagtgcagcgtctttgggaatccaattctgctgcccataaggagatatgtgcagt attggcggcagtcacagaggtaatccgaacacagggtggtacagaaagtgagacagagtattttggtgtcttgatgacta ctctggaagctgtggaatctcctgaatccctggctgctgttgcttatctgttaagtttagtgttgaagcgtgtacccagc cctgtgttgatcaaaaagttctccgatacgtccaaggcttttatgggaattctgggctcacaagcttgtggagactctaa tttggctctacgatgggtcctttcctgtctagctacattgctgcaaagacaaaatctgataacatggaattaccctgtga caatgcaagtttttcatggtcttctcagcttcactgtccatgtcaagcccaaagtccgcaaggctgctcagcatggtgtt tgctctgtcctcaggggtagtgaattcctgtttggagatggagctcctttacatcacccagctgcaatttctactgctaa gttctgcattcaacaaattgagaaatctggaggtgctaaggaggccacaacaactttgcatatgctgactctgctgcgtg atttattgccttgttttcctgctccagctgtcaaatcttgctctgaaaccttgcttcgagttatgaccctcagccatgta ctagtgacagcatgtgctatgaaagcttttcatagtctctttgctgcccattcatctccagtgtgtctgccagctgaact taatgcccagattatcatggctctttatgactatgtacccaatgagaatgacttgcagcctctgttggcctggctggctg tcatggaacgggcacatgttaacctagcgaagctgcagtgggatctgtgctgggctcatcttcctcgtctcttcagcgta gctatgaactgtttcctgtctcctcacagccaggtggtggatgctgccgcccagaccctaatggttttgctcaatgaatg tgtggcccctcaagtgacagaactaggacttgtttcatccgcaactccgtctggatctgctgctcagatttgcaagatgt tcagagcagtggaagaaggtctgacataccagtaccatgcagcttgggcctcggtgttgcaagtgctgagggttttcttt gaagcatgtgggcagcagtgtcatcctataatgcaaaagtgtctacagtccctagctgatctgcgtagctcctctcactt tccccacactgtgttgcttgatcagactctgggggccgcagtggccaccatgggccctgaaatggtgctggaggctattc ccctagatattgatggcacagaggagacactggattttcctcgcagttggctccttcctgtgctccgagaccacatccaa agtgcaccacttgcttttttctccagtcatttcctgccacttgctgctgctttaaaaaacagagccacagagcttgccca ggcaggtcaggatttagaagctaagatctacaatacactccagtggcaaatctggaccttgctgcctagtttctgcagcc atgctacagatgtggtactctcattcaaaggactggcacgcactctaggcacggccattaacgactgttctgaactgcag cagatagtgtgccaagctttgcgcaggctaattaataagggctgccaaactgagcctgagcgtgctgaagttgggcgctt tgcaaagaactttctgcccatcatgttcaatgtatacagccaagagggtgatgatagtgagagctcagtgcaccggcgct ctttgctggacaccatccgagcctacttgacagttactgaagcagggctggtgaattccttcctggagaaagcttgtgag aaactgatcagttctgatagttcagaattcactaggctttctattttagatcttgtggtcactatggctccctatgctga tgagtcatctctgcatgctctgtatggcagcatctactcctccctgcaaaacaaagatcatagaatacagaaaaaggttt atcgagtgctagaggaagtgtgtgcctctgaccaacctgcgtgtcaaaattttgttcaaagtcatttggaggaactgaag agtgctctgttggactccctaaccagggcaacttcacctgccaagagaccccgtctgaagtgcctcttccatgttatcaa acaactgacagtggaacatgaagattttgtcacagccctggtgccagaggttatcctttgcaccaaagaagtctctgtgg gggcccgcaaaaatgcttacaatctgttggtagaaattggtcacacttttatacgctttggtctcactccaaatgaggga atacagcgttatctcctcctgatctatgcaggcttaactggctctgtcactatgatcagctgcactgtgcttgctcttac ccgtctactgtatgagttcaaagaacatattgggtcagatgccctcgagcagctggtgaaacatgtttgcctcatgatag gctcacgtactcgggatgttgtcaaatcagctctaggattccttaaagtgacagtcctgctcttggacgcaacattgctg ggtcggcacttggagactatgttagaagccattggacgattgacagatgacatgaggcgccactttcgtatgaagctgcg aaatctcctttccaaattgatccggaaatttgggttcgagcccttgcaggctctgcttcctgaatcatatcacaaagtac tgcttaatattcgtaaggcagaatcaagaaaccgcaagagacaagctgtgaaaagagctgcagccacttctgcagaagaa gaaaaaacattagcaccatctaagggagacagcattgaggatgtcttggcagactcagattctgatctagaagatgagac cggcaaacaaaaaggaagaacgagtaggaaagtgcgaaggcaacaaaaccaagcttggcttaaggagggagaaagtgatg aacccctcaacttcttggatccaaatgtggcacacagggtgttagctaccaggccaggcactgcccaaactggaaaagtt aaacatgatttcaaattatcagctgatggtcgcttaatcatatgtgaagaggaagaagaacctacaggactgaatgagga gtcagcagagttaatgcaggaagttggaatcaagaatggttgtgatggctggatctcggacgtttggagagaattacatt tgacttatcagatagattccctgtttccattaaataataaaaagactcggaaacgtcgatttcgggaagaggcagatgat gaagggcttgctgctgatacacagccacaatacaaagcagggggcaaaggaattcatcggcctgttagcaagaatgcagc acctggggcagagtacaaagcaaagaaaggcaaaggtgacatcaagaaaaaaggtgggctcgatccttacgcatacatcc cactgaacagagcaaaactaaaccggaggaagaaagccaaacttcaaggacagtgcacgaatctgatgaagggagctcag cgtggtgcccaagcaggcaagagactcttcaaaaagcaggcccatacctgaaggagaaaaggccactcagaatttacctg gaaagcagtccctttatgtcattgggctgtggatcttgttgctgctattccacggtctgagttaattcctaaaaaatgga atttgctcgttattcctgcatattggctatacatattattttcagcaaaaaaagtagtaaaaaatgtatacatcctccct tttgttatttatggatccttgtaataggggttttcttgccagttgttactctggttccttccacagctatgagcagtgtg agcaaatctagaactttgggtaagagactgattattgcttcccaatgaacacctgagcaattcatagtataataaattct gtttcttcagtataatataggcactggatctgtgaaacctgcttttctgtctattgtctttctctatttgaagcaacttg tttatttggtaacaactacaaattctctaagaagtctagatttatttggtagtaggtaagaacaaatgattcatagtaat aaaaacaaaagaaaggaattattatttccaaggaaaacttagagcggtgaataatgatcttagcttctgaataaaagttc tactggtacttctattg |
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Protein
| Protein ID | habu1_s1341_g04757.t1 |
|---|---|
| Definition | - |
>habu1_s1341_g04757.t1 MGRSGKLRSGTAGKLKRWRKGHSSDSNPEGRRYRLAARGRLLAPRSENSNLTVDALKLHNELQSSGPVSRENAKSFVVED NSESAKTHKSSATFLSGLTDCTNLTFSRVQRLWESNSAAHKEICAVLAAVTEVIRTQGGTESETEYFGVLMTTLEAVESP ESLAAVAYLLSLVLKRVPSPVLIKKFSDTSKAFMGILGSQACGDSNLALRWVLSCLATLLQRQNLITWNYPVTMQVFHGL LSFTVHVKPKVRKAAQHGVCSVLRGSEFLFGDGAPLHHPAAISTAKFCIQQIEKSGGAKEATTTLHMLTLLRDLLPCFPA PAVKSCSETLLRVMTLSHVLVTACAMKAFHSLFAAHSSPVCLPAELNAQIIMALYDYVPNENDLQPLLAWLAVMERAHVN LAKLQWDLCWAHLPRLFSVAMNCFLSPHSQVVDAAAQTLMVLLNECVAPQVTELGLVSSATPSGSAAQICKMFRAVEEGL TYQYHAAWASVLQVLRVFFEACGQQCHPIMQKCLQSLADLRSSSHFPHTVLLDQTLGAAVATMGPEMVLEAIPLDIDGTE ETLDFPRSWLLPVLRDHIQSAPLAFFSSHFLPLAAALKNRATELAQAGQDLEAKIYNTLQWQIWTLLPSFCSHATDVVLS FKGLARTLGTAINDCSELQQIVCQALRRLINKGCQTEPERAEVGRFAKNFLPIMFNVYSQEGDDSESSVHRRSLLDTIRA YLTVTEAGLVNSFLEKACEKLISSDSSEFTRLSILDLVVTMAPYADESSLHALYGSIYSSLQNKDHRIQKKVYRVLEEVC ASDQPACQNFVQSHLEELKSALLDSLTRATSPAKRPRLKCLFHVIKQLTVEHEDFVTALVPEVILCTKEVSVGARKNAYN LLVEIGHTFIRFGLTPNEGIQRYLLLIYAGLTGSVTMISCTVLALTRLLYEFKEHIGSDALEQLVKHVCLMIGSRTRDVV KSALGFLKVTVLLLDATLLGRHLETMLEAIGRLTDDMRRHFRMKLRNLLSKLIRKFGFEPLQALLPESYHKVLLNIRKAE SRNRKRQAVKRAAATSAEEEKTLAPSKGDSIEDVLADSDSDLEDETGKQKGRTSRKVRRQQNQAWLKEGESDEPLNFLDP NVAHRVLATRPGTAQTGKVKHDFKLSADGRLIICEEEEEPTGLNEESAELMQEVGIKNKKTRKRRFREEADDEGLAADTQ PQYKAGGKGIHRPVSKNAAPGAEYKAKKGKGDIKKKGGLDPYAYIPLNRAKLNRRKKAKLQGQCTNLMKGAQRGAQAGKR LFKKQAHT |
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| Protein ID | habu1_s1341_g04757.t2 |
| Definition | - |
>habu1_s1341_g04757.t2 MGRSGKLRSGTAGKLKRWRKGHSSDSNPEGRRYRLAARGRLLAPRSENSNLTVDALKLHNELQSSGPVSRENAKSFVVED NSESAKTHKSSATFLSGLTDCTNLTFSRVQRLWESNSAAHKEICAVLAAVTEVIRTQGGTESETEYFGVLMTTLEAVESP ESLAAVAYLLSLVLKRVPSPVLIKKFSDTSKAFMGILGSQACGDSNLALRWVLSCLATLLQRQNLITWNYPVTMQVFHGL LSFTVHVKPKVRKAAQHGVCSVLRGSEFLFGDGAPLHHPAAISTAKFCIQQIEKSGGAKEATTTLHMLTLLRDLLPCFPA PAVKSCSETLLRVMTLSHVLVTACAMKAFHSLFAAHSSPVCLPAELNAQIIMALYDYVPNENDLQPLLAWLAVMERAHVN LAKLQWDLCWAHLPRLFSVAMNCFLSPHSQVVDAAAQTLMVLLNECVAPQVTELGLVSSATPSGSAAQICKMFRAVEEGL TYQYHAAWASVLQVLRVFFEACGQQCHPIMQKCLQSLADLRSSSHFPHTVLLDQTLGAAVATMGPEMVLEAIPLDIDGTE ETLDFPRSWLLPVLRDHIQSAPLAFFSSHFLPLAAALKNRATELAQAGQDLEAKIYNTLQWQIWTLLPSFCSHATDVVLS FKGLARTLGTAINDCSELQQIVCQALRRLINKGCQTEPERAEVGRFAKNFLPIMFNVYSQEGDDSESSVHRRSLLDTIRA YLTVTEAGLVNSFLEKACEKLISSDSSEFTRLSILDLVVTMAPYADESSLHALYGSIYSSLQNKDHRIQKKVYRVLEEVC ASDQPACQNFVQSHLEELKSALLDSLTRATSPAKRPRLKCLFHVIKQLTVEHEDFVTALVPEVILCTKEVSVGARKNAYN LLVEIGHTFIRFGLTPNEGIQRYLLLIYAGLTGSVTMISCTVLALTRLLYEFKEHIGSDALEQLVKHVCLMIGSRTRDVV KSALGFLKVTVLLLDATLLGRHLETMLEAIGRLTDDMRRHFRMKLRNLLSKLIRKFGFEPLQALLPESYHKVLLNIRKAE SRNRKRQAVKRAAATSAEEEKTLAPSKGDSIEDVLADSDSDLEDETGKQKGRTSRKVRRQQNQAWLKEGESDEPLNFLDP NVAHRVLATRPGTAQTGKVKHDFKLSADGRLIICEEEEEPTGLNEESAELMQEVGIKNGCDGWISDVWRELHLTYQIDSL FPLNNKKTRKRRFREEADDEGLAADTQPQYKAGGKGIHRPVSKNAAPGAEYKAKKGKGDIKKKGGLDPYAYIPLNRAKLN RRKKAKLQGQCTNLMKGAQRGAQAGKRLFKKQAHT |
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