Gene
| Gene Model ID | habu1_s1341_g04758 |
|---|---|
| Locus | habu1_scaffold1341 : 206206 ... 228878 : + |
| To GenomeBrowser | habu1_scaffold1341:206206..228878 |
| Genes list of scaffold | habu1_scaffold1341 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| rho gtpase-activating protein 19 | GO:0005622 GO:0007165 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1341_g04758.t2 | 1 | 1 | RhoGAP | 151 | 306 | 1.7e-36 | 125.0 | 2.8e-40 | 2.1e-36 | 124.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s1341_g04758.t2 | gi|697440938|ref|XP_009663857.1| | PREDICTED: rho GTPase-activating protein 19 [Struthio camelus australis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.8 |
| Venom grand-1 | 0.1 |
| Pit, infrared sensing | 1.1 |
| Nose | 0.7 |
| Brain-1 | 0.2 |
| Eye | 0.0 |
| fetal fibroblast | 10.2 |
| venom gland-2 | 0.0 |
| Brain-2 | 0.4 |
| Spleen | 0.4 |
| Lung | 0.1 |
| Liver | 0.0 |
| Kidney | 0.0 |
| Pancreas | 0.0 |
| Small intestine | 0.1 |
| Large intestine | 0.1 |
| Stomach | 0.1 |
| heart | 0.0 |
| ovary | 10.6 |
| cheek muscle | 0.2 |
Transcript
| Transcript ID | habu1_s1341_g04758.t1 |
|---|---|
| Definition | - |
>habu1_s1341_g04758.t1 cccaagtaacttagcgcaatacagttccttgcttcgcctttcttatcagttttcctattggtccgcgagaaatcattaag ctgttgccacgttcgaacaaaccaatggctgcatgaagaaagggtgggggaaaacaagctgctctggtaacagccaattg acttgcgattgaatggcctatgggaaagcaaagcggcagatatgaaatggcgacggaaccgactgggagaaaaggtgcag ctgggcaaacgtatagtgatgccatttgcagttttgttatctgcaatgagtcttcccttcagcggcatcagatcatcttt aatccagacttctttgtggagaagctgagacatgagaaacctgaagcattcacagaacttgtggtcagcaacattacccg attgattgacttgcctggagcagaacttgctcaactgatgggcgaggaagagccccagctgcctggtgggcctagcattt cctcaggttttttccgttccttgatgtctcttaaacgcaaagagaaaggagtggtatttggaacaccattgactgaagaa ggcattgctcaaatatctcaactcattgagtatttgcataaaaatttgcggacagaaggcttgtttcgagtgccaggaaa cagtaccaggcaacagaacctgaaagaagctttgaatagcggaacagaaattgacctggattccggcgagtttcattcca atgatgtggccactttgttgaagatgttcctgggagaattaccagagcctttgctgactcacaaacatttccatgcacac cttaaaatttcagacctggtgcagtttgatgacaagggcaacaagaccagcattccaaataaagagcgtcaaattgaagc actgcaattgctcttcttgatcttaccagctgccaatcgcaatctgctcaaattgctattggatctgctctatcaaacag ccaagaaacaggataggaacaagatgtcagcacataaccttgctcttatgttttcacctcatattttgtggccccgaaat gtgactgccagcgatctgcaggaaaacattaacaaactgaataatggaatggctttcatgatcaagcactcacaaaaact cttcaaagctccagtatatatccgggaatatgccaggctacattacttggattccagaactcatgcctcaaaggatgacc tggatttgccaatgccccagaatttcaaagacgttcagcttctgaaattcaagaagcgagggctcttagatccttctgcc cacttggaagacacacagcaccatacagaagaagcactgaaagagcttttctgccatgttcataatatgccagactccgc caagaaaaagaagcttattcagcagtttcagaagcaccctgaagcccttactcctcagacagctatatccacacagattc agaaacgtgcccgaactcgttccttcagcggcctaatcaagcgtaaagtgctgggaagtcaagtgattttagataaaaag aaaaacgatattgttacagaacctgcaggcactcaggattcaaagcatggcagcaaggagaatatcagcatgatacctgc ttcttctccagcaattaacatgatacgagctaagctgaaatctcttgaacataggaaagaggatgcctctaaaaatactt gatttcatggaacttcaagaatattgaagttga |
|
| Transcript ID | habu1_s1341_g04758.t2 |
| Definition | - |
>habu1_s1341_g04758.t2 cccaagtaacttagcgcaatacagttccttgcttcgcctttcttatcagttttcctattggtccgcgagaaatcattaag ctgttgccacgttcgaacaaaccaatggctgcatgaagaaagggtgggggaaaacaagctgctctggtaacagccaattg acttgcgattgaatggcctatgggaaagcaaagcggcagatatgaaatggcgacggaaccgactgggagaaaaggctgtg ttggagcaggcagttctatttctgaaaacaaggaatgagttcttctcattacatctctgcttcccaatgccgcgccagaa actttcagcacttgttgatgccatttgcagttttgttatctgcaatgagtcttcccttcagcggcatcagatcatcttta atccagacttctttgtggagaagctgagacatgagaaacctgaagcattcacagaacttgtggtcagcaacattacccga ttgattgacttgcctggagcagaacttgctcaactgatgggcgaggaagagccccagctgcctggtgggcctagcatttc ctcaggttttttccgttccttgatgtctcttaaacgcaaagagaaaggagtggtatttggaacaccattgactgaagaag gcattgctcaaatatctcaactcattgagtatttgcataaaaatttgcggacagaaggcttgtttcgagtgccaggaaac agtaccaggcaacagaacctgaaagaagctttgaatagcggaacagaaattgacctggattccggcgagtttcattccaa tgatgtggccactttgttgaagatgttcctgggagaattaccagagcctttgctgactcacaaacatttccatgcacacc ttaaaatttcagacctggtgcagtttgatgacaagggcaacaagaccagcattccaaataaagagcgtcaaattgaagca ctgcaattgctcttcttgatcttaccagctgccaatcgcaatctgctcaaattgctattggatctgctctatcaaacagc caagaaacaggataggaacaagatgtcagcacataaccttgctcttatgttttcacctcatattttgtggccccgaaatg tgactgccagcgatctgcaggaaaacattaacaaactgaataatggaatggctttcatgatcaagcactcacaaaaactc ttcaaagctccagtatatatccgggaatatgccaggctacattacttggattccagaactcatgcctcaaaggatgacct ggatttgccaatgccccagaatttcaaagacgttcagcttctgaaattcaagaagcgagggctcttagatccttctgccc acttggaagacacacagcaccatacagaagaagcactgaaagagcttttctgccatgttcataatatgccagactccgcc aagaaaaagaagcttattcagcagtttcagaagcaccctgaagcccttactcctcagacagctatatccacacagattca gaaacgtgcccgaactcgttccttcagcggcctaatcaagcgtaaagtgctgggaagtcaagtgattttagataaaaaga aaaacgatattgttacagaacctgcaggcactcaggattcaaagcatggcagcaaggagaatatcagcatgatacctgct tcttctccagcaattaacatgatacgagctaagctgaaatctcttgaacataggaaagaggatgcctctaaaaatacttg atttcatggaacttcaagaatattgaagttga |
|
Protein
| Protein ID | habu1_s1341_g04758.t1 |
|---|---|
| Definition | - |
>habu1_s1341_g04758.t1 MGKQSGRYEMATEPTGRKGAAGQTYSDAICSFVICNESSLQRHQIIFNPDFFVEKLRHEKPEAFTELVVSNITRLIDLPG AELAQLMGEEEPQLPGGPSISSGFFRSLMSLKRKEKGVVFGTPLTEEGIAQISQLIEYLHKNLRTEGLFRVPGNSTRQQN LKEALNSGTEIDLDSGEFHSNDVATLLKMFLGELPEPLLTHKHFHAHLKISDLVQFDDKGNKTSIPNKERQIEALQLLFL ILPAANRNLLKLLLDLLYQTAKKQDRNKMSAHNLALMFSPHILWPRNVTASDLQENINKLNNGMAFMIKHSQKLFKAPVY IREYARLHYLDSRTHASKDDLDLPMPQNFKDVQLLKFKKRGLLDPSAHLEDTQHHTEEALKELFCHVHNMPDSAKKKKLI QQFQKHPEALTPQTAISTQIQKRARTRSFSGLIKRKVLGSQVILDKKKNDIVTEPAGTQDSKHGSKENISMIPASSPAIN MIRAKLKSLEHRKEDASKNT |
|
| Protein ID | habu1_s1341_g04758.t2 |
| Definition | - |
>habu1_s1341_g04758.t2 MKWRRNRLGEKAVLEQAVLFLKTRNEFFSLHLCFPMPRQKLSALVDAICSFVICNESSLQRHQIIFNPDFFVEKLRHEKP EAFTELVVSNITRLIDLPGAELAQLMGEEEPQLPGGPSISSGFFRSLMSLKRKEKGVVFGTPLTEEGIAQISQLIEYLHK NLRTEGLFRVPGNSTRQQNLKEALNSGTEIDLDSGEFHSNDVATLLKMFLGELPEPLLTHKHFHAHLKISDLVQFDDKGN KTSIPNKERQIEALQLLFLILPAANRNLLKLLLDLLYQTAKKQDRNKMSAHNLALMFSPHILWPRNVTASDLQENINKLN NGMAFMIKHSQKLFKAPVYIREYARLHYLDSRTHASKDDLDLPMPQNFKDVQLLKFKKRGLLDPSAHLEDTQHHTEEALK ELFCHVHNMPDSAKKKKLIQQFQKHPEALTPQTAISTQIQKRARTRSFSGLIKRKVLGSQVILDKKKNDIVTEPAGTQDS KHGSKENISMIPASSPAINMIRAKLKSLEHRKEDASKNT |
|