Gene
| Gene Model ID | habu1_s1341_g04759 |
|---|---|
| Locus | habu1_scaffold1341 : 245036 ... 383286 : + |
| To GenomeBrowser | habu1_scaffold1341:245036..383286 |
| Genes list of scaffold | habu1_scaffold1341 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| slit homolog 1 protein | GO:0005509 GO:0005615 GO:0007165 GO:0008045 GO:0022028 GO:0031290 GO:0033563 GO:0040023 GO:0048495 GO:0048846 GO:0050919 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1341_g04759.t1 | 4 | 1 | LRRNT | 33 | 60 | 3.7e-29 | 99.5 | 2.2e-11 | 2.2e-08 | 33.3 |
| habu1_s1341_g04759.t1 | 10 | 1 | LRR_8 | 64 | 116 | 0.0 | 282.9 | 2.8e-11 | 2.7e-08 | 33.4 |
| habu1_s1341_g04759.t1 | 7 | 1 | LRR_4 | 64 | 97 | 0.0 | 154.5 | 3.5e-07 | 0.00035 | 20.1 |
| habu1_s1341_g04759.t1 | 4 | 1 | LRR_5 | 71 | 167 | 2.3e-37 | 127.6 | 2.7e-11 | 2.7e-08 | 33.5 |
| habu1_s1341_g04759.t1 | 10 | 2 | LRR_8 | 110 | 169 | 0.0 | 282.9 | 2.6e-12 | 2.6e-09 | 36.6 |
| habu1_s1341_g04759.t1 | 7 | 2 | LRR_4 | 110 | 147 | 0.0 | 154.5 | 4.6e-06 | 0.0045 | 16.5 |
| habu1_s1341_g04759.t1 | 4 | 2 | LRR_5 | 129 | 215 | 2.3e-37 | 127.6 | 4.4e-10 | 4.4e-07 | 29.6 |
| habu1_s1341_g04759.t1 | 10 | 3 | LRR_8 | 159 | 217 | 0.0 | 282.9 | 5.1e-16 | 5.0e-13 | 48.5 |
| habu1_s1341_g04759.t1 | 7 | 3 | LRR_4 | 183 | 220 | 0.0 | 154.5 | 5.6e-08 | 5.6e-05 | 22.6 |
| habu1_s1341_g04759.t1 | 2 | 1 | LRRCT | 239 | 263 | 6.4e-15 | 53.8 | 2.9e-06 | 0.0029 | 17.7 |
| habu1_s1341_g04759.t1 | 4 | 2 | LRRNT | 282 | 308 | 3.7e-29 | 99.5 | 1.7e-11 | 1.7e-08 | 33.7 |
| habu1_s1341_g04759.t1 | 4 | 3 | LRR_5 | 311 | 426 | 2.3e-37 | 127.6 | 7.7e-13 | 7.6e-10 | 38.5 |
| habu1_s1341_g04759.t1 | 10 | 4 | LRR_8 | 312 | 369 | 0.0 | 282.9 | 3.0e-16 | 3.0e-13 | 49.3 |
| habu1_s1341_g04759.t1 | 7 | 4 | LRR_4 | 315 | 350 | 0.0 | 154.5 | 6.0e-09 | 5.9e-06 | 25.7 |
| habu1_s1341_g04759.t1 | 1 | 1 | LRR_9 | 333 | 418 | 6.3e-11 | 42.1 | 2.6e-07 | 0.00026 | 20.6 |
| habu1_s1341_g04759.t1 | 7 | 5 | LRR_4 | 358 | 397 | 0.0 | 154.5 | 5.9e-06 | 0.0058 | 16.2 |
| habu1_s1341_g04759.t1 | 10 | 5 | LRR_8 | 361 | 417 | 0.0 | 282.9 | 2.2e-13 | 2.2e-10 | 40.1 |
| habu1_s1341_g04759.t1 | 10 | 6 | LRR_8 | 383 | 440 | 0.0 | 282.9 | 1.0e-11 | 1.0e-08 | 34.7 |
| habu1_s1341_g04759.t1 | 7 | 6 | LRR_4 | 406 | 445 | 0.0 | 154.5 | 6.0e-06 | 0.0059 | 16.2 |
| habu1_s1341_g04759.t1 | 4 | 3 | LRRNT | 505 | 531 | 3.7e-29 | 99.5 | 1.6e-08 | 1.5e-05 | 24.2 |
| habu1_s1341_g04759.t1 | 10 | 7 | LRR_8 | 536 | 593 | 0.0 | 282.9 | 3.3e-16 | 3.3e-13 | 49.1 |
| habu1_s1341_g04759.t1 | 7 | 7 | LRR_4 | 536 | 573 | 0.0 | 154.5 | 1.1e-09 | 1.1e-06 | 28.1 |
| habu1_s1341_g04759.t1 | 4 | 4 | LRR_5 | 552 | 662 | 2.3e-37 | 127.6 | 7.3e-13 | 7.2e-10 | 38.6 |
| habu1_s1341_g04759.t1 | 10 | 8 | LRR_8 | 582 | 641 | 0.0 | 282.9 | 8.9e-15 | 8.8e-12 | 44.6 |
| habu1_s1341_g04759.t1 | 10 | 9 | LRR_8 | 606 | 663 | 0.0 | 282.9 | 1.7e-13 | 1.7e-10 | 40.5 |
| habu1_s1341_g04759.t1 | 2 | 2 | LRRCT | 687 | 712 | 6.4e-15 | 53.8 | 8.5e-06 | 0.0084 | 16.3 |
| habu1_s1341_g04759.t1 | 4 | 4 | LRRNT | 725 | 752 | 3.7e-29 | 99.5 | 2.9e-09 | 2.9e-06 | 26.5 |
| habu1_s1341_g04759.t1 | 10 | 10 | LRR_8 | 754 | 812 | 0.0 | 282.9 | 1.1e-07 | 0.00011 | 21.9 |
| habu1_s1341_g04759.t1 | 6 | 1 | EGF | 873 | 904 | 1.6e-22 | 79.1 | 1.4e-10 | 1.4e-07 | 31.3 |
| habu1_s1341_g04759.t1 | 6 | 2 | EGF | 990 | 1022 | 1.6e-22 | 79.1 | 3.1e-07 | 0.00031 | 20.6 |
| habu1_s1341_g04759.t1 | 6 | 3 | EGF | 1030 | 1059 | 1.6e-22 | 79.1 | 4.9e-07 | 0.00048 | 20.0 |
| habu1_s1341_g04759.t1 | 6 | 4 | EGF | 1075 | 1102 | 1.6e-22 | 79.1 | 8.2e-07 | 0.00081 | 19.3 |
| habu1_s1341_g04759.t1 | 1 | 1 | Laminin_G_1 | 1137 | 1267 | 2.5e-26 | 92.2 | 4.0e-29 | 3.9e-26 | 91.5 |
| habu1_s1341_g04759.t1 | 1 | 1 | Laminin_G_2 | 1138 | 1265 | 7.4e-29 | 100.3 | 1.3e-31 | 1.2e-28 | 99.6 |
| habu1_s1341_g04759.t1 | 6 | 5 | EGF | 1285 | 1315 | 1.6e-22 | 79.1 | 8.0e-06 | 0.0079 | 16.1 |
| habu1_s1341_g04759.t1 | 6 | 6 | EGF | 1324 | 1352 | 1.6e-22 | 79.1 | 7.0e-06 | 0.0069 | 16.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s1341_g04759.t1 | gi|694941261|ref|XP_009457316.1| | PREDICTED: slit homolog 1 protein isoform X1 [Pan troglodytes] | 0.0 |
| habu1_s1341_g04759.t1 | gi|119570341|gb|EAW49956.1| | slit homolog 1 (Drosophila), isoform CRA_a [Homo sapiens] | 0.0 |
| habu1_s1341_g04759.t1 | gi|685563680|ref|XP_009213340.1| | PREDICTED: slit homolog 1 protein isoform X2 [Papio anubis] | 0.0 |
| habu1_s1341_g04759.t1 | gi|694941263|ref|XP_009457317.1| | PREDICTED: slit homolog 1 protein isoform X2 [Pan troglodytes] | 0.0 |
| habu1_s1341_g04759.t1 | gi|694941265|ref|XP_009457318.1| | PREDICTED: slit homolog 1 protein isoform X3 [Pan troglodytes] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 1.0 |
| Venom grand-1 | 0.1 |
| Pit, infrared sensing | 1.6 |
| Nose | 0.9 |
| Brain-1 | 21.7 |
| Eye | 2.8 |
| fetal fibroblast | 0.3 |
| venom gland-2 | 0.1 |
| Brain-2 | 19.3 |
| Spleen | 8.1 |
| Lung | 0.6 |
| Liver | 0.0 |
| Kidney | 0.2 |
| Pancreas | 0.4 |
| Small intestine | 0.2 |
| Large intestine | 0.6 |
| Stomach | 0.1 |
| heart | 0.0 |
| ovary | 0.1 |
| cheek muscle | 0.7 |
Transcript
| Transcript ID | habu1_s1341_g04759.t1 |
|---|---|
| Definition | - |
>habu1_s1341_g04759.t1 ttgcgtcagacacaacgaagctgctccacgccgcgccagccaaacgcgccgctgcgagataatgcgcggggcagctcctc gctagcaggctagcccaggcaggcggcatggctccgaagcggcgagcggggtcaggcggcgtgtggctgcgggcgggagc ctgcctgttggcctgggcgaccgtttgccgcgtccgggcgagcgcttgccccacacggtgcgcctgcagcggcaccacgg tagactgtcacgggctggggctccgcagtattcccaagaacatcccgaggagcgcagaaaggctggaactgaatggaaac aatatcactcggatcagtaaacatgactttgctgggctgaagcagctgagagttctgcagctgatggaaaaccagatcaa tgtggtggaacgaggagcgtttgacgacatgaaagaattagagcgactacggctaaataggaaccagctacacactttgc cagagctcctctttcagaataaccaagcattgtcacggctagacctgagtgaaaaccttcttcaggctgtgcccagaaag gccttccgtggagccactgacctcaagaatttgcagctggacaagaaccatataagttgcattgaagaaggggcctttcg tgctctccgtgggctggaagtattgactttgaacaacaacaatatcagctccatacccatctccagcttcaaccatatgc ccaaactgcgtactttccgcttgcactccaatcagctgatctgtgattgtcatttgggttggctttcccagtggcttcgc cagcgacctactattggactcttcacccaatgtgctggtccttcatcccttcgtggtctaaacgttgcagaaatccaaaa gaatgaattcagctgcacaggccaagatgatgttaccaggattcacatctgcagtttttcatctgggtcctgtcctgcca tgtgtacttgtagcaatggcattgtagattgccgtggcaaaggtctaacagccatccctgcaaacttaccagaaaccatg acagagatacgtctggaactcaatggcatcaagtccatcccccccggagccttctcatcatacaagaaactacgtaggat agacctgagcaacaaccagatttcagaaattgcacctgatgccttccaaggccttcgttcactcaactctctagtcttgt atgggaacaagatcacagagttgcccaaaggagtatttgggggcctttatgcactacaactactgctactgaatgccaac aagattaactgcattcgagcagatgcctttgctgacctgcagaacctctcactgctctctctttatgacaacaagatcca gaccttggccaaaggcacttttgccaccctgcgtgccatccagacactccatctggcccagaacccgtttatttgcgact gcaacctgaagtggctggcagacttcttgcgtgccaatcctatcgagacaagtggtgctcgttgtgccagtccccggcgc ttggccaacaagcgcattggacagatcaagagcaagaaattccgctgttcccgtacggaggattaccatttgaacagtga atgccatagtgatgtggtttgcccggccaagtgccgctgcgaagccaatgtagtcgagtgctccaatctgaggctgacaa agatcccagagcgcctcccacaggctactgctgaattacgcctgaataacaatgaaatcacagtggtggaggcgacaggt atcttcaagaaacttccacacttaaagaaaataaatttgagcaacaacaaagtctcagagattgaggatggggcctttga gggggcagcctccgtgagtgagttgcatttgactgctaaccagctggagtcagtgcgcagctccatgttccggggcttgg atgggctgcgaacactgatgctgaggaacaatcgcatcaactgtattcacaatgacagcttcactgggctgcgcaacgtg cgccttctctccttgtatgacaatcagatcaacattatttcaccgggggcttttgacacgttgcagtcactctctactct gaatctactggctaaccccttcaattgcaattgtcatctggcctggctgggtgattggcttcgcaagagaaagattgtga ctgggaatccacgctgccacaatccagattttctgcgccaaatcccactgcaggatgttgccttccccgacttcaggtgt gaggaaggtaaggaggagaccatctgcttcccacgtcctcagtgcccccaggagtgcacctgccttgacacagtagttcg ctgcagcaataagcacctgaaaagtcttccaaaagggatacccaagaatgtgactgagctctacttggatggcaaccaat tcatccttattccaggacaactctccactttccgttacttgcagctggtgtctcttcatggaaatgatatctccacactc cctgaagggatctttgctgatgttacctccttatctcatctagcaattggtgccaaccccctgtattgtgattgccacat gcactggctctcaagctgggtcaaaactggctacaaagaacctggcattgcccgttgtgctggtcctgcggatatggaag gcaaacttctgctcacaactccagctaagaagtttgaatgccagggtcctcccccaccaatcatccaggccaagtgtaac ccctgtctctccaatccctgccaaaacaggggcagttgtcagcaagatcctctgggctcctatcactgtgtctgtcccga tggttataagggcaaatactgtgacctatcttttgatggttgctccggcagattctgtgaaaatggtgggacctgcctgc ctcaagaaggagatggatccagctttaaatgttcttgtgtggatggatttgaaggtccaagatgtaatctgaaaaccaat cattgcaacaacagttgcaagaatgggggcacatgtgttaatgggtccactaaccacacatgcttgtgcctacccttcta tacagggacatattgtgaacagctggtgaatgtatgttccccagagctcagcccctgccagcctaatgccatatgtagag tctcccacgatggacccaagtgtgaatgtatgcctggctatgcaggagataattgcagtacggactacaatgactgccta ggccaccaatgccagaacaatgccaagtgttttgatgaaccaaatggttattcctgtctttgtactggtggcttcagtgg tcagctctgtgagatcccacctcatggctcctttcagtccagtccctgtgagagggttgagtgccagaatggtgccaact gtgtggagttaggcaatcgtgccttatgccaatgccttcctggctttggagggctcaaatgtgagaagctactgagtgtc aattttgtggatagggacacatacctacaattcacggacttgcagaattggcccactgccaatattactctgcaggtctc cacagctgaagataatgggattctcttgtataatggggacactgaccacatggcagtggaactttatcaaggccatgtgc gtgtcagctatgatccaggcagttaccctagctcagctctttacagtgcagagaccatcaatgatggacagttccataca gtggaactggtgacatttgagcggatggtaaacctatctatcgacggaggcaatcccatgaccatggatagctttggcaa ggcccacactctgaattctgaggctccactctatgtggggggcatgccagtggatgtgaattctgctgccttccgagttt ggcaaatcttgaatggttccagcttccatggatgtatccgcaatttatacatcaacaatgaattacaagactttactaaa actcagatgaaaccaggagttgtgcctggttgtgaaccttgccgcaagctctattgcatgcatggcatttgccaacccaa cactgctcatggacccatttgttactgtgattcaggctggactgggccccattgtgaccagcccattactaacccttgcc agggacacaagtgtgaacatggaatctgcatgcctcttgatgcactttcctatagttgccagtgccaagatggttacaaa ggagccttgtgcaaccaggaagttgaactacgcaacccatgcaagagcttggagtgtgttcatggtcagtgccagatctc agatgcaggagaggcctactgtgaatgcaactcaggatttgatggagatctctgtgatcaagaatcagagtgtcggggag aggctgtgcgagatttccatcaagtccagcgaggttatgccatttgccagacaacacggccagtctcctggatggagtgc cagggatcatgcccaggactaggctgctgtggaggactgcgtcttaagcgcaagaaatatacctttgagtgcagcgatgg ctcatcctttgtggaggaagtggaaaaacctagcaaatgtggctgttcccattgcatgtaatctctgccagttctacttt ttctcttatcgagtagcttctcttattctctgctcatggtaacttcatcttctgttaatggggctaaattgcaagcagta cagagaccaggagcaaagggaacattattacaagactagaaaagaaaaaaaatacttaagaaattgaggaaggaattgtt gctgcctacaacttaatggttataagacactgaggaataaaaacaacttagacttgcaattgc |
|
Protein
| Protein ID | habu1_s1341_g04759.t1 |
|---|---|
| Definition | - |
>habu1_s1341_g04759.t1 MAPKRRAGSGGVWLRAGACLLAWATVCRVRASACPTRCACSGTTVDCHGLGLRSIPKNIPRSAERLELNGNNITRISKHD FAGLKQLRVLQLMENQINVVERGAFDDMKELERLRLNRNQLHTLPELLFQNNQALSRLDLSENLLQAVPRKAFRGATDLK NLQLDKNHISCIEEGAFRALRGLEVLTLNNNNISSIPISSFNHMPKLRTFRLHSNQLICDCHLGWLSQWLRQRPTIGLFT QCAGPSSLRGLNVAEIQKNEFSCTGQDDVTRIHICSFSSGSCPAMCTCSNGIVDCRGKGLTAIPANLPETMTEIRLELNG IKSIPPGAFSSYKKLRRIDLSNNQISEIAPDAFQGLRSLNSLVLYGNKITELPKGVFGGLYALQLLLLNANKINCIRADA FADLQNLSLLSLYDNKIQTLAKGTFATLRAIQTLHLAQNPFICDCNLKWLADFLRANPIETSGARCASPRRLANKRIGQI KSKKFRCSRTEDYHLNSECHSDVVCPAKCRCEANVVECSNLRLTKIPERLPQATAELRLNNNEITVVEATGIFKKLPHLK KINLSNNKVSEIEDGAFEGAASVSELHLTANQLESVRSSMFRGLDGLRTLMLRNNRINCIHNDSFTGLRNVRLLSLYDNQ INIISPGAFDTLQSLSTLNLLANPFNCNCHLAWLGDWLRKRKIVTGNPRCHNPDFLRQIPLQDVAFPDFRCEEGKEETIC FPRPQCPQECTCLDTVVRCSNKHLKSLPKGIPKNVTELYLDGNQFILIPGQLSTFRYLQLVSLHGNDISTLPEGIFADVT SLSHLAIGANPLYCDCHMHWLSSWVKTGYKEPGIARCAGPADMEGKLLLTTPAKKFECQGPPPPIIQAKCNPCLSNPCQN RGSCQQDPLGSYHCVCPDGYKGKYCDLSFDGCSGRFCENGGTCLPQEGDGSSFKCSCVDGFEGPRCNLKTNHCNNSCKNG GTCVNGSTNHTCLCLPFYTGTYCEQLVNVCSPELSPCQPNAICRVSHDGPKCECMPGYAGDNCSTDYNDCLGHQCQNNAK CFDEPNGYSCLCTGGFSGQLCEIPPHGSFQSSPCERVECQNGANCVELGNRALCQCLPGFGGLKCEKLLSVNFVDRDTYL QFTDLQNWPTANITLQVSTAEDNGILLYNGDTDHMAVELYQGHVRVSYDPGSYPSSALYSAETINDGQFHTVELVTFERM VNLSIDGGNPMTMDSFGKAHTLNSEAPLYVGGMPVDVNSAAFRVWQILNGSSFHGCIRNLYINNELQDFTKTQMKPGVVP GCEPCRKLYCMHGICQPNTAHGPICYCDSGWTGPHCDQPITNPCQGHKCEHGICMPLDALSYSCQCQDGYKGALCNQEVE LRNPCKSLECVHGQCQISDAGEAYCECNSGFDGDLCDQESECRGEAVRDFHQVQRGYAICQTTRPVSWMECQGSCPGLGC CGGLRLKRKKYTFECSDGSSFVEEVEKPSKCGCSHCM |
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