Gene
| Gene Model ID | habu1_s1341_g04760 |
|---|---|
| Locus | habu1_scaffold1341 : 427426 ... 479465 : - |
| To GenomeBrowser | habu1_scaffold1341:427426..479465 |
| Genes list of scaffold | habu1_scaffold1341 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| ligand-dependent corepressor | GO:0000122 GO:0003677 GO:0003700 GO:0005667 GO:0008134 GO:0045449 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1341_g04760.t1 | 1 | 1 | HTH_psq | 610 | 653 | 8.4e-15 | 54.0 | 1.1e-18 | 8.4e-15 | 54.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s1341_g04760.t1 | gi|514706624|ref|XP_005010394.1| | PREDICTED: ligand-dependent corepressor-like isoform X1 [Anas platyrhynchos] | 0.0 |
| habu1_s1341_g04760.t1 | gi|530591594|ref|XP_005289443.1| | PREDICTED: ligand-dependent corepressor [Chrysemys picta bellii] | 0.0 |
| habu1_s1341_g04760.t1 | gi|591387651|ref|XP_007068240.1| | PREDICTED: ligand-dependent corepressor [Chelonia mydas] | 0.0 |
| habu1_s1341_g04760.t1 | gi|584072795|ref|XP_006756676.1| | PREDICTED: ligand-dependent corepressor [Myotis davidii] | 0.0 |
| habu1_s1341_g04760.t1 | gi|724947276|ref|XP_010387880.1| | PREDICTED: ligand-dependent corepressor isoform X1 [Rhinopithecus roxellana] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.5 |
| Venom grand-1 | 0.1 |
| Pit, infrared sensing | 0.2 |
| Nose | 0.1 |
| Brain-1 | 1.4 |
| Eye | 0.1 |
| fetal fibroblast | 1.2 |
| venom gland-2 | 0.2 |
| Brain-2 | 1.2 |
| Spleen | 0.7 |
| Lung | 0.1 |
| Liver | 0.2 |
| Kidney | 0.4 |
| Pancreas | 0.7 |
| Small intestine | 3.0 |
| Large intestine | 0.1 |
| Stomach | 0.3 |
| heart | 0.5 |
| ovary | 0.6 |
| cheek muscle | 0.6 |
Transcript
| Transcript ID | habu1_s1341_g04760.t1 |
|---|---|
| Definition | - |
>habu1_s1341_g04760.t1 agatggcaggcgtgccggcggtgacttgggggcccctcctccagaagatggcgagtccgtgcgggcggcagaagtgctcc atcgagaggcgcggcttccgccaccagctcgactcgtggcgacaccggctgctgcgctgtgtggatccagtttctgatcc tacttccacatttgggattgttaagagaatcactgaagctattaagttagtaacaaggttgttaagtgaatctggcttcc ccattgactttgcttgtcagaaggttgcaaaaggggatcacatgaccccagaacactgcagctgtcataaatacgaactg gttgtcaagcatcttaattttgatcatgtgaccacggggatgctgcaacggtcaagaagaagaagaagaagaagaagaag aagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagctgcaagaagattgcacagactgactacaagc agcggcatgacaaagtagcaacaatggtgcattggaagatctgcaagaaatatcattcgcctatctggaatttgtttaaa gactttgaacctgaaggtgtctctgattggtcttttgatgaaaattgtcttttctgctgtttgagaagagaaaaagtgaa ggaacatttcgtcagtctggatgatccagcattggaagttgggcagcacgctctgcttaaacaagagcaaacgaagatca cttggtttgagaggcaagcggaagaattcctccatgaagtcttttatcgaaaagatagtcccagggtctcagaccccaac atttccttagtggcccgcgagatcatgcagcggatgatccgacaatttgctgctgaatatacctcaaaaactagctctac tcaggactccagttcgcccaatagcacaaagaaccaaagcctgctgaaagcatctccggttgcctcatccactgcaggtg caagagctcaaaatcccgtgctcagcaaacttctcatggctgaccaggactcacccttggacctcactgtcagaaaatca caattggaccctagtgaacaagacggagtgcttgatctgtccactaagaaaagtccttgtgcaggcaatgtctccttgag ccattcacctggctgctctgctactcctgggaatgggcgacctgggagacccagccagcaccatgcagagggacttcgga gtggtgatggggtacccccaagaagctggcaggatggaacgagggaagggtctggccactccacatctctcaaagttcca ttggctcgatcactgcagataagtgaagaactgctgagcagaaaccagcatgctaccgctgccagccatgggccatctgg gttgcagaatcacggacagcacatgatactatccagggaggcttcttgggcaaaaccacactacgaattcaactttaccc gaatgaaattcaggggaaatggtgcactccacaacattagtgaccttccttttcttacagaaaactctgcttttcaaaaa atggcacttcaaactaaacaggatgggaaaaaggacatgagccattcaactcctgtggatttaaagataccacaagttcg aggcatggacctttcatgggaatcccgttctggtgaccagtatagctatagctctttggtgatgggttcacaaacggaga gcgcgcttagtaaaaagttaagggctatccttccgaaacaaaataggaggagcttgctggatcctggaccagattcctgg ggctcagatgctgagcaatctacctctggacagccatattccacctctgatcaggagggtgatcctggctctaagcaacc tcggaagaaaagaggcagatacagacaatacaacagtgagatattggaggaagcgatttctgtggtgatgaatgggaaaa tgagcgtttccaaagctcagagtatttatgggattccccacagcaccctggagtataaagtgaaagagaggctgggcact ttgaaaaaccctccaaagaaaaaaatgaaattaatgcgttcggagggacaggatgtctctgtaaagcttgagatagatcc ccagggagaggcagcacacagtgcaaatgagtcaaaggacgattagggatgttgtagagtgccaattgcatactaaactg ggaagatggcctaaataaccccaatgactgctgcttggatttggggcagttagttatgggccttcttgatttgttgattg aatacagtggattgctgggaagcagaggttaggcacaccattgctgtcatgttaaatatgcacttctcattcttgagaga gattgggcttctagcccatatatgctttgtactactgttaatgtactttttttttttaaaatttgcttaatgtatttcca tactcaaaaagcagagttccttagctgtcccagatgccatctcagtacagacatctgtttaaagccctgtagtagtatag aaactctgcaatataatccagtttcactggagattgcaataaaaatgcactgttttaaatttgtg |
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Protein
| Protein ID | habu1_s1341_g04760.t1 |
|---|---|
| Definition | - |
>habu1_s1341_g04760.t1 MASPCGRQKCSIERRGFRHQLDSWRHRLLRCVDPVSDPTSTFGIVKRITEAIKLVTRLLSESGFPIDFACQKVAKGDHMT PEHCSCHKYELVVKHLNFDHVTTGMLQRSRRRRRRRRRRRRRRRRRRRRRRRRSCKKIAQTDYKQRHDKVATMVHWKICK KYHSPIWNLFKDFEPEGVSDWSFDENCLFCCLRREKVKEHFVSLDDPALEVGQHALLKQEQTKITWFERQAEEFLHEVFY RKDSPRVSDPNISLVAREIMQRMIRQFAAEYTSKTSSTQDSSSPNSTKNQSLLKASPVASSTAGARAQNPVLSKLLMADQ DSPLDLTVRKSQLDPSEQDGVLDLSTKKSPCAGNVSLSHSPGCSATPGNGRPGRPSQHHAEGLRSGDGVPPRSWQDGTRE GSGHSTSLKVPLARSLQISEELLSRNQHATAASHGPSGLQNHGQHMILSREASWAKPHYEFNFTRMKFRGNGALHNISDL PFLTENSAFQKMALQTKQDGKKDMSHSTPVDLKIPQVRGMDLSWESRSGDQYSYSSLVMGSQTESALSKKLRAILPKQNR RSLLDPGPDSWGSDAEQSTSGQPYSTSDQEGDPGSKQPRKKRGRYRQYNSEILEEAISVVMNGKMSVSKAQSIYGIPHST LEYKVKERLGTLKNPPKKKMKLMRSEGQDVSVKLEIDPQGEAAHSANESKDD |
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