Gene
| Gene Model ID | habu1_s1341_g04761 |
|---|---|
| Locus | habu1_scaffold1341 : 489307 ... 513338 : - |
| To GenomeBrowser | habu1_scaffold1341:489307..513338 |
| Genes list of scaffold | habu1_scaffold1341 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| peroxisome proliferator-activated receptor gamma coactivator-related protein partial | GO:0000166 GO:0003676 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1341_g04761.t2 | 1 | 1 | RRM_1 | 889 | 943 | 1.2e-08 | 34.4 | 1.0e-11 | 4.9e-08 | 32.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s1341_g04761.t2 | gi|724960569|ref|XP_010354450.1| | PREDICTED: peroxisome proliferator-activated receptor gamma coactivator-related protein 1 isoform X1 [Rhinopithecus roxellana] | 0.0 |
| habu1_s1341_g04761.t2 | gi|488587211|ref|XP_004478933.1| | PREDICTED: peroxisome proliferator-activated receptor gamma coactivator-related protein 1 isoform X1 [Dasypus novemcinctus] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 4.9 |
| Venom grand-1 | 2.9 |
| Pit, infrared sensing | 5.2 |
| Nose | 5.0 |
| Brain-1 | 2.4 |
| Eye | 3.3 |
| fetal fibroblast | 26.6 |
| venom gland-2 | 13.9 |
| Brain-2 | 2.5 |
| Spleen | 4.7 |
| Lung | 1.2 |
| Liver | 0.6 |
| Kidney | 1.5 |
| Pancreas | 2.2 |
| Small intestine | 1.8 |
| Large intestine | 2.4 |
| Stomach | 2.2 |
| heart | 1.7 |
| ovary | 77.8 |
| cheek muscle | 1.6 |
Transcript
| Transcript ID | habu1_s1341_g04761.t1 |
|---|---|
| Definition | - |
>habu1_s1341_g04761.t1 ggcgaaaaaggcgcaggtccgcaactgtacgtaggtcgggggttgcgttgtttcctgggaaatatagttctacagtgccg gccgggcttctgaagctatttgtgaggaggtgccaagatggcggccctgtggggcggcggtgcgggacatgctggggctg ggggaaccctccccatgcgaggtgcctcggagcctttggtgggcaatagcttttcttctacgcagtgtttactggcagag gatttgcacttggcatctttggaagcagaaaccatccttgaagctggggaattcctggaaacaatgcaggactacttaga ctcttctgtcatttccatcattgaagatttcagcagtttgactgaggtaaaaagccacatggatgcagagaatgaacttt ccctgttgacggcaataacagatattcttgatagcacggatgatgagactctgtctccctttgatcctattcctgaatct gaattgctaacatcacccagagaaattgagaattcttcgtttcagagatttcttagtttttctctgacacccgatgaaca agacttacacaatattgaggatttccaggagcctggactgtgcaccattatgtcaaagaaggttgaagccagtactaccg gcattcccttctcattatcttccagttgtcccaaactttcagttttttcaaacaatgtgagtaacaaagcattctgggag gaaaagaagctcttcaagaatagagaacaagaatcacctgtgctacagagcagtgatggagaggaagaagaggtcacaca aggatgcagggaaagttttacggcagttgtgacggagatggaacctgagagagaccttgatgaatgtgatgatccctata tcattgccgcagaaaatatttcccttgatgaattagtgagatcaatgcactcttactgccagcccaccctcactgtatgc ctgacttctgataatcagtcccttgctgagaagaatctcacaggcccacttgtcttagaaataatgcctgatggtggaga gatcatgatggggaaaaaattgcctgagcttgactcatacaaacaagatgggaaggtagttaatgctatccttccaaaca taaaagacggtcatctacagatagaggacactcagaaatcaacagataatcaaaacaatacacctgtgcctgcctcagtg gctccaaaaaatgcctcaaagaagggtcaggtatctacaaatattaaaaagaagaagagaaagaaatccagagagggaac aaagtatcacaagaccataaactgccaacaagtgtctgcctgtcctcaaatgcagaccaggattgatgcaaagaaatctg tgacagactctagttttcaaaaaaaagaactagagaaaactggaaggaaaaaattgctcctaaatcaagtatctcagaca aaggaaatgcttgaaactcaagtagaatggtcaaaatgtgtgagggaggcaggatcaagcttagtaagtgcaaggaatgt gccatatgcagaggagcccacacaaaatctaggaaatgcagaccttgtgcctatagtccagagggatgtcccaggagaac cccatgaaaaaagacagttcctcctaccaatgattgaaatgtctagctcagaaacttcccaaatgctccctggttgcact acggatcttacaggacagccgaccaaggatacaccttactttgaaaatcaggaacttatctgccctccaagggaaactaa acctcggcctctcagcttgagtgaatacaggcagcgccggcagcagcgcccgtctaataatgacagtatccagaacacca gagagaaccggagtgccagcaagtggcccagtgttcccaatttccctacagagttggctgaccttccttgcctgagagct ctgccacccaccaaagctgcagcacctaaacttgcaaaggaacctgaaaaacctgccgcctcccccactactcttgcccc tgatgacaaagcaagtgccatgaccctttccatgctctcttccgctacaactctgaaacaaagagatcctccatcttcgc agaatgtctgtggaggctctcagtctccatcttcgcggcttccttcacctacacctattgctgtagtgcctgctagtaaa gtatgtgctttttctcacattgggccacaagtgcctccagcattgtccgtacctcatgtgccaccagcccgagatacttt cctaccagctcctcctaaccactacaatttgggctcatcccaaccagcaggatcttcatggtctcactttgctcttctac cagctaattaccaaagtttgccacctccaccacctcttactgaagcttgttctcctgtcttccatacagtccccccctta ctccctccaacgtggcctcccccacctgttcctttgccttttgttccagccctgccttatggctctgttgagtgggctcc actgccacagtcttcctactggtctggaataccagtgccacctccagtgttgcctatcccatatggagatcaaggaagtc tgaggcaaagtcctcagtttggcactttacctgctccatctctttctgatggatttcctggccagcaaagtacagcttta gcaccagagtcctcctgtattggatttaaaaacatggtcagtgaaagtcaaagcctgcctgtccagatatgccaagtaga agctccttcagcaatcagggcagctcccagaaaaatatctgatccaagaagacaaacacagctctctacggttcaatctc aaactgaagtaacttcaagcagttctcagtcattggagaaactgcctttgtcaccatcagttgataagccttcaaaagaa acagcatcgactcagcacgggagcaaaagttctgccctgcagtccttaggggtgccccttcctgtgccgccttctcatca aatactgggagaatctgctggtaaactgaagctctcaaaagaagactttcagcttatagagaagaaccctgaactctctg actttgtagaaactactactgttactgtggctcagaacaacaagaagccaccagcagaggaacattctttcctttcagtt tccttggcacctggaaaacaaaaggagccagctgaaatccaatcagatgtcacagaacatgcccttgttgctcccaatcc ctcaacattatcagggccccagaaagtacagaaaaatggccatctttccaagaaaacttcatcatccatgtggaaaaacc agcctttcatcaactctgcacagcataagcatgataaagatctttttcactcatttatcaatgagattggaattgaggct tctgacctatctagcctgctagagcaatttgaaaagattgaagccaaaacagaagcatctactgtattaaagaaaaataa atctacagggaataatgggtctgagttacaatgggaaaagaaaatggtggaccggcttcatgcaccagagctcatcaatg ttgcaggtttgactcctccagccactccaccccatcagctgtggaaacctttggtacctgtctcattaccgggacaggat gggtcccaaaaagataccaggcttttgaaatccctaaacaaattccactggaaagctgtaacccctgtccacgtaggctc tggtgagcatgactattgtcaactaactgttgctcagccaaagggaggtgccagatggaatattaaacagaacttggata ttactataaaacctattaagaccctaacaagacaagtgctagatcaaaaaacctctgctgatataaaaaggccccctgct gctgttagattgaatcctgtagttcctacttgtcagaatcctagagaatttgccaactatgttaattccaacaagggcca gaccaaagattccaggactgttatggctgacttgaaacctactatcccaagttcaacattgttggagaccagtcttatac atccatgcaaagaggcattggaccatcggactactattccaaggtccatgactgggggcaatgatgatccatgctctgta ctgctgtcaccggctgcatccccttgcagagattcaggagaatcaacattacagcaacttcaggagatacaggagaaacc tctcgcttcgaaacgctccttaagatgctaccggagcagacagagatcagctagtccggaaagccacaggggcagaagcc gacgaaaccatgctagccggtccttcagttcaagctctgatggtgacagtgatacttcatcatcttcatcgtcgtcgtcg tcgtcatcctcttcttcgtcacaatcacgttctcggtctccaccatccaaacactggcgaagatgtcgttcacggaattc cagctcttcttccactaaatggagccattcaaggggcaggtcccgctctccctccaattcctcttacagatcacgatcat cctcccggtccccttctccgcacagaaggaataactacaggaaaagctataattctagcagttcctatgaacgttaccaa aggcagaaaaacaaatataaagaacgtgcaatcgaggaacgccgcgttgtcttcattggtaagatccacaacaggatgac acgatcagagttgcgacatcgtttctctgtttttggggacattgaagactgcacactgcacttccgggagcatggggata actttggctttgtgacttatcgatacgctgaagatgcctttgctgctatagaaggtggacatgcactgcttcgtcctgat gaacagccctttgatctgggttttggaggacgtcgacagttctgtaaaagaagctacgctgacttagattccagccaaga tgactttcaacctgcctttctgaaaaataaatacgatgctcttgactttgacaccttattgaagcaggctcagcgaagtc tgcggaggtagtgctagttctcctgggctcagttgcccagtaggcatctgcctacaccagccttacctcagattggttgc aggggcaaacagcccccctccggcccagctccgtatccagcatgatttttttaatgaaatacaaacataaaaaaaaatat tctgggtttttcctaaaagctatttaagggaaggacctttgtttaacaagtgggataggaatggaaatacattgacaatt tctagtccacttaattgctatgcagacaataaaattccaactacagacttaacaa |
|
| Transcript ID | habu1_s1341_g04761.t2 |
| Definition | - |
>habu1_s1341_g04761.t2 ggcgaaaaaggcgcaggtccgcaactgtacgtaggtcgggggttgcgttgtttcctgggaaatatagttctacagtgccg gccgggcttctgaagctatttgtgaggaggtgccaagatggcggccctgtggggcggcggtgcgggacatgctggggctg ggggaaccctccccatgcgaggtgcctcggagcctttggtgggcaatagcttttcttctacgcagtgtttactggcagag gatttgcacttggcatctttggaagcagaaaccatccttgaagctggggaattcctggaaacaatgcaggactacttaga ctcttctgtcatttccatcattgaagatttcagcagtttgactgaggtaaaaagccacatggatgcagagaatgaacttt ccctgttgacggcaataacagatattcttgatagcacggatgatgagactctgtctccctttgatcctattcctgaatct gaattgctaacatcacccagagaaattgagaattcttcgtttcagagatttcttagtttttctctgacacccgatgaaca agacttacacaatattgaggatttccaggagcctggactgtgcaccattatgtcaaagaaggttgaagccagtactaccg gcattcccttctcattatcttccagttgtcccaaactttcagttttttcaaacaataccaggattgatgcaaagaaatct gtgacagactctaaggagcccacacaaaatctaggaaatgcagaccttgtgcctatagtccagagggatgtcccaggaga accccatgaaaaaagacagttcctcctaccaatgattgaaatgtctagctcagaaacttcccaaatgctccctggttgca ctacggatcttacaggacagccgaccaaggatacaccttactttgaaaatcaggaacttatctgccctccaagggaaact aaacctcggcctctcagcttgagtgaatacaggcagcgccggcagcagcgcccgtctaataatgacaccctgccttatgg ctctgttgagtgggctccactgccacagtcttcctactggtctggaataccagtgccacctccagtgttgcctatcccat atggagatcaaggaagtctgaggcaaagtcctcagtttggcactttacctgctccatctctttctgatggatttcctggc cagcaaattgataagccttcaaaagaaacagcatcgactcagcacgggagcaaaagttctgccctgcagtccttaggggt gccccttcctgtgccgccttctcatcaaatactgggagaatctgctggtaaactgaagctctcaaaagaagactttcagc ttatagagaagaaccctgaactctctgactttgtagaaactactactgttactgtggctcagaacaacaagaagccacca gcagaggaacattctttcctttcagtttccttggcacctggaaaacaaaaggagccagctgaaatccaatcagatgtcac agaacatgcccttgttgctcccaatccctcaacattatcagggccccagaaagtacagaaaaatggccatctttccaaga aaacttcatcatccatgtggaaaaaccagcctttcatcaactctgcacagcataagcatgataaagatctttttcactca tttatcaatgagattggaattgaggcttctgacctatctagcctgctagagcaatttgaaaagattgaagccaaaacaga agcatctactgtattaaagaaaaataaatctacagggaataatgggtctgagttacaatgggaaaagaaaatggtggacc ggcttcatgcaccagagctcatcaatgttgcaggtttgactcctccagccactccaccccatcagctgtggaaacctttg gtacctgtctcattaccgggacaggatgggtcccaaaaagataccaggcttttgaaatccctaaacaaattccactggaa agctgtaacccctgtccacaccctaacaagacaagtgctagatcaaaaaacctctgctgatataaaaaggccccctgctg ctgttagattgaatcctgtagttcctacttgtcagaatcctagagaatttgccaactatgttaattccaacaagggccag accaaagattccaggactgttatggctgacttgaaacctactatcccaagttcaacattgttggagaccagtcttataca tccatgcaaagaggcattggaccatcggactactattccaagagattcaggagaatcaacattacagcaacttcaggaga tacaggagaaacctctcgcttcgaaacgctccttaagatgctaccggagcagacagagatcagctagtccggaaagccac aggggcagaagccgacgaaaccatgctagccggtccttcagttcaagctctgatggtgacagtgatacttcatcatcttc atcgtcgtcgtcgtcgtcatcctcttcttcgtcacaatcacgttctcggtctccaccatccaaacactggcgaagatgtc gttcacggaattccagctcttcttccactaaatggagccattcaaggggcaggtcccgctctccctccaattcctcttac agatcacgatcatcctcccggtccccttctccgcacagaaggaataactacaggaaaagctataattctagcagttccta tgaacgttaccaaaggcagaaaaacaaatataaagaacgtgcaatcgaggaacgccgcgttgtcttcattggtaagatcc acaacaggatgacacgatcagagttgcgacatcgtttctctgtttttggggacattgaagactgcacactgcacttccgg gagcatggggataactttggctttgtgacttatcgatacgctgaagatgcctttgctgctatagaaggtggacatgcact gcttcgtcctgatgaacagccctttgatctgggttttggaggacgtcgacagttctgtaaaagaagctacgctgacttag attccagccaagatgactttcaacctgcctttctgaaaaataaatacgatgctcttgactttgacaccttattgaagcag gctcagcgaagtctgcggaggtagtgctagttctcctgggctcagttgcccagtaggcatctgcctacaccagccttacc tcagattggttgcaggggcaaacagcccccctccggcccagctccgtatccagcatgatttttttaatgaaatacaaaca taaaaaaaaatattctgggtttttcctaaaagctatttaagggaaggacctttgtttaacaagtgggataggaatggaaa tacattgacaatttctagtccacttaattgctatgcagacaataaaattccaactacagacttaacaa |
|
Protein
| Protein ID | habu1_s1341_g04761.t1 |
|---|---|
| Definition | - |
>habu1_s1341_g04761.t1 MAALWGGGAGHAGAGGTLPMRGASEPLVGNSFSSTQCLLAEDLHLASLEAETILEAGEFLETMQDYLDSSVISIIEDFSS LTEVKSHMDAENELSLLTAITDILDSTDDETLSPFDPIPESELLTSPREIENSSFQRFLSFSLTPDEQDLHNIEDFQEPG LCTIMSKKVEASTTGIPFSLSSSCPKLSVFSNNVSNKAFWEEKKLFKNREQESPVLQSSDGEEEEVTQGCRESFTAVVTE MEPERDLDECDDPYIIAAENISLDELVRSMHSYCQPTLTVCLTSDNQSLAEKNLTGPLVLEIMPDGGEIMMGKKLPELDS YKQDGKVVNAILPNIKDGHLQIEDTQKSTDNQNNTPVPASVAPKNASKKGQVSTNIKKKKRKKSREGTKYHKTINCQQVS ACPQMQTRIDAKKSVTDSSFQKKELEKTGRKKLLLNQVSQTKEMLETQVEWSKCVREAGSSLVSARNVPYAEEPTQNLGN ADLVPIVQRDVPGEPHEKRQFLLPMIEMSSSETSQMLPGCTTDLTGQPTKDTPYFENQELICPPRETKPRPLSLSEYRQR RQQRPSNNDSIQNTRENRSASKWPSVPNFPTELADLPCLRALPPTKAAAPKLAKEPEKPAASPTTLAPDDKASAMTLSML SSATTLKQRDPPSSQNVCGGSQSPSSRLPSPTPIAVVPASKVCAFSHIGPQVPPALSVPHVPPARDTFLPAPPNHYNLGS SQPAGSSWSHFALLPANYQSLPPPPPLTEACSPVFHTVPPLLPPTWPPPPVPLPFVPALPYGSVEWAPLPQSSYWSGIPV PPPVLPIPYGDQGSLRQSPQFGTLPAPSLSDGFPGQQSTALAPESSCIGFKNMVSESQSLPVQICQVEAPSAIRAAPRKI SDPRRQTQLSTVQSQTEVTSSSSQSLEKLPLSPSVDKPSKETASTQHGSKSSALQSLGVPLPVPPSHQILGESAGKLKLS KEDFQLIEKNPELSDFVETTTVTVAQNNKKPPAEEHSFLSVSLAPGKQKEPAEIQSDVTEHALVAPNPSTLSGPQKVQKN GHLSKKTSSSMWKNQPFINSAQHKHDKDLFHSFINEIGIEASDLSSLLEQFEKIEAKTEASTVLKKNKSTGNNGSELQWE KKMVDRLHAPELINVAGLTPPATPPHQLWKPLVPVSLPGQDGSQKDTRLLKSLNKFHWKAVTPVHVGSGEHDYCQLTVAQ PKGGARWNIKQNLDITIKPIKTLTRQVLDQKTSADIKRPPAAVRLNPVVPTCQNPREFANYVNSNKGQTKDSRTVMADLK PTIPSSTLLETSLIHPCKEALDHRTTIPRSMTGGNDDPCSVLLSPAASPCRDSGESTLQQLQEIQEKPLASKRSLRCYRS RQRSASPESHRGRSRRNHASRSFSSSSDGDSDTSSSSSSSSSSSSSSSQSRSRSPPSKHWRRCRSRNSSSSSTKWSHSRG RSRSPSNSSYRSRSSSRSPSPHRRNNYRKSYNSSSSYERYQRQKNKYKERAIEERRVVFIGKIHNRMTRSELRHRFSVFG DIEDCTLHFREHGDNFGFVTYRYAEDAFAAIEGGHALLRPDEQPFDLGFGGRRQFCKRSYADLDSSQDDFQPAFLKNKYD ALDFDTLLKQAQRSLRR |
|
| Protein ID | habu1_s1341_g04761.t2 |
| Definition | - |
>habu1_s1341_g04761.t2 MAALWGGGAGHAGAGGTLPMRGASEPLVGNSFSSTQCLLAEDLHLASLEAETILEAGEFLETMQDYLDSSVISIIEDFSS LTEVKSHMDAENELSLLTAITDILDSTDDETLSPFDPIPESELLTSPREIENSSFQRFLSFSLTPDEQDLHNIEDFQEPG LCTIMSKKVEASTTGIPFSLSSSCPKLSVFSNNTRIDAKKSVTDSKEPTQNLGNADLVPIVQRDVPGEPHEKRQFLLPMI EMSSSETSQMLPGCTTDLTGQPTKDTPYFENQELICPPRETKPRPLSLSEYRQRRQQRPSNNDTLPYGSVEWAPLPQSSY WSGIPVPPPVLPIPYGDQGSLRQSPQFGTLPAPSLSDGFPGQQIDKPSKETASTQHGSKSSALQSLGVPLPVPPSHQILG ESAGKLKLSKEDFQLIEKNPELSDFVETTTVTVAQNNKKPPAEEHSFLSVSLAPGKQKEPAEIQSDVTEHALVAPNPSTL SGPQKVQKNGHLSKKTSSSMWKNQPFINSAQHKHDKDLFHSFINEIGIEASDLSSLLEQFEKIEAKTEASTVLKKNKSTG NNGSELQWEKKMVDRLHAPELINVAGLTPPATPPHQLWKPLVPVSLPGQDGSQKDTRLLKSLNKFHWKAVTPVHTLTRQV LDQKTSADIKRPPAAVRLNPVVPTCQNPREFANYVNSNKGQTKDSRTVMADLKPTIPSSTLLETSLIHPCKEALDHRTTI PRDSGESTLQQLQEIQEKPLASKRSLRCYRSRQRSASPESHRGRSRRNHASRSFSSSSDGDSDTSSSSSSSSSSSSSSSQ SRSRSPPSKHWRRCRSRNSSSSSTKWSHSRGRSRSPSNSSYRSRSSSRSPSPHRRNNYRKSYNSSSSYERYQRQKNKYKE RAIEERRVVFIGKIHNRMTRSELRHRFSVFGDIEDCTLHFREHGDNFGFVTYRYAEDAFAAIEGGHALLRPDEQPFDLGF GGRRQFCKRSYADLDSSQDDFQPAFLKNKYDALDFDTLLKQAQRSLRR |
|