Gene
| Gene Model ID | habu1_s1341_g04764 |
|---|---|
| Locus | habu1_scaffold1341 : 640054 ... 645678 : - |
| To GenomeBrowser | habu1_scaffold1341:640054..645678 |
| Genes list of scaffold | habu1_scaffold1341 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| hermansky-pudlak syndrome 6 protein | GO:0005515 GO:0016043 GO:0043473 GO:0044763 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s1341_g04764.t1 | gi|602674776|ref|XP_007442876.1| | PREDICTED: Hermansky-Pudlak syndrome 6 protein [Python bivittatus] | 0.0 |
| habu1_s1341_g04764.t1 | gi|637328957|ref|XP_008114270.1| | PREDICTED: Hermansky-Pudlak syndrome 6 protein [Anolis carolinensis] | 0.0 |
| habu1_s1341_g04764.t1 | gi|530591685|ref|XP_005289488.1| | PREDICTED: Hermansky-Pudlak syndrome 6 protein [Chrysemys picta bellii] | 0.0 |
| habu1_s1341_g04764.t1 | gi|527273845|ref|XP_005154695.1| | PREDICTED: Hermansky-Pudlak syndrome 6 protein [Melopsittacus undulatus] | 0.0 |
| habu1_s1341_g04764.t1 | gi|686600200|ref|XP_009276333.1| | PREDICTED: Hermansky-Pudlak syndrome 6 protein [Aptenodytes forsteri] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 2.1 |
| Venom grand-1 | 2.2 |
| Pit, infrared sensing | 1.9 |
| Nose | 2.2 |
| Brain-1 | 1.1 |
| Eye | 1.5 |
| fetal fibroblast | 2.0 |
| venom gland-2 | 2.2 |
| Brain-2 | 1.2 |
| Spleen | 2.2 |
| Lung | 3.2 |
| Liver | 3.1 |
| Kidney | 3.3 |
| Pancreas | 1.7 |
| Small intestine | 1.9 |
| Large intestine | 3.7 |
| Stomach | 2.1 |
| heart | 2.8 |
| ovary | 65.0 |
| cheek muscle | 2.7 |
Transcript
| Transcript ID | habu1_s1341_g04764.t1 |
|---|---|
| Definition | - |
>habu1_s1341_g04764.t1 agccttttttccggccctatgtggtcggcagccgctccggacatcccaaaatgaagggagcggtggagcttcggcaggtc tcggactggagtgactatgttcgaggccgctggctgcgggagctgctggatcagcgtcgttctggggagcctcccagccg catcctaaccagccccgacaagcaccatctgcttctcctgtggaaccagccggcctcccagcctcgagtggtggcttttc agcgcctggggctcgatggaggggagctggagaggacctggaagccacctcaacccgcggtagtggagctgcttttcttg gaaagccctgccacaactgtctcctgggtgttggctatcatttgggagcaaggcaggaccgaagtctggcgctttgtgcc caccgcgggatggcatttgctgcagagtctggaactgtgccatggagcccgtgctcggattgtctccatttgcagcttgg gggaacagcttgtgtggtgtgaagagaggcctcctttggatgctcagctgactcctgagagaagagccttccagtattgt atttgtgttcgaggccttcagattggagagcagggtgtccagctgagccctctcagggttatcttgcacaatagccctgt ttaccaagtcttggccaaaccctctggagtcttccttgtccccaccccagccaccttcccaagaatagccaagtttgtcc tcatctggcgacctgaaatggctgatattgttattgctgcgccacatggtccgtgcgtttccctaaaagcctcgcatgca ggcagcgatgtagacttcaaaaagctaatgctgagttacgtgggattcttggaatccatgaaaaatttggctgtacacag ctgcgccctatccaattgcggagagctgctcttgatcacgcaaacaggcacaatacagggagtccaacctaatggcgtgt ggcgacctgtctttgacttttcaggaggcattttgtcttcaggagagcaggtccaactaaaggtatttgggggcatcctg gcttgcttgctgaaggagactctttatcttgtggatttgaacagtagagagttgatagaaaacaaagtcctgagcactga aagagtacactttttggactctcctaccgtagaagaagaaatccagctccttgctcaggatggcatttatactcttgact tctcagactctgatcaaggctgccagtcacaacccaacctagtgcagatggtgtttgaagaagcctgcaaatactatcaa agacggagtctcagcagttcccaactcactgtggagaaactgaagaaggggggcatgtttcaggctcctgtggcactctc ttccatcctgtgctatagtcttgatcccaaaggaaaaaagctccgggccctcccggaatcttataccaagctcctgggca caatgcaattagaactgcagaattatcaagacctggagttcctcaagttgcgtgtggttcaatcttcagaaagtgaggta aagacctatggtgaagcgctggtggaacaagaactcactcgccttcttcgcttggacttgaacagagagaacttggcgta cctgaatgtcgtattcacagctttccctggggctttctggaaagctatccagaaccatctccagctacaagagaatgggg ctggcatgctggtagcgagagccactccagatgtgtggaaaaaaattctggggggagctactcttagcccaactatctta gtgaatgttctggcttggtcaaccattgaattttgagacaggtaaattcctgttgaataagcatttgtcacatcattaca aaaatacaccaaagttatatttaacagcagcattagaaattatggtttcttttattaaaatatttcgagtccaacaaaac atagcttcctgaccatttgggatttccttcttacactgtggcagccagctaattttcaagcaaggtccaaaactgatatc ctgattatttgttcttgatttatgttaatatttaacactgcaattccagtaacagcaagatgtcattcttggggaacaac aatttataaatgctaagtatccaaggcctacctcaaatcctataaaagctatgaaaaatataatttccttgaatttacaa acgaaaaacaatacattaataaaaataattatattcattcaaatg |
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Protein
| Protein ID | habu1_s1341_g04764.t1 |
|---|---|
| Definition | - |
>habu1_s1341_g04764.t1 MKGAVELRQVSDWSDYVRGRWLRELLDQRRSGEPPSRILTSPDKHHLLLLWNQPASQPRVVAFQRLGLDGGELERTWKPP QPAVVELLFLESPATTVSWVLAIIWEQGRTEVWRFVPTAGWHLLQSLELCHGARARIVSICSLGEQLVWCEERPPLDAQL TPERRAFQYCICVRGLQIGEQGVQLSPLRVILHNSPVYQVLAKPSGVFLVPTPATFPRIAKFVLIWRPEMADIVIAAPHG PCVSLKASHAGSDVDFKKLMLSYVGFLESMKNLAVHSCALSNCGELLLITQTGTIQGVQPNGVWRPVFDFSGGILSSGEQ VQLKVFGGILACLLKETLYLVDLNSRELIENKVLSTERVHFLDSPTVEEEIQLLAQDGIYTLDFSDSDQGCQSQPNLVQM VFEEACKYYQRRSLSSSQLTVEKLKKGGMFQAPVALSSILCYSLDPKGKKLRALPESYTKLLGTMQLELQNYQDLEFLKL RVVQSSESEVKTYGEALVEQELTRLLRLDLNRENLAYLNVVFTAFPGAFWKAIQNHLQLQENGAGMLVARATPDVWKKIL GGATLSPTILVNVLAWSTIEF |
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