Gene
| Gene Model ID | habu1_s1344_g04796 |
|---|---|
| Locus | habu1_scaffold1344 : 95446 ... 150671 : + |
| To GenomeBrowser | habu1_scaffold1344:95446..150671 |
| Genes list of scaffold | habu1_scaffold1344 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| probable e3 ubiquitin-protein ligase trim8 | GO:0005737 GO:0008270 GO:0016605 GO:0016874 GO:0032897 GO:0042803 GO:0043123 GO:0045087 GO:0046597 GO:0051092 GO:1902187 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s1344_g04796.t2 | gi|699648625|ref|XP_009879831.1| | PREDICTED: probable E3 ubiquitin-protein ligase TRIM8 [Charadrius vociferus] | 0.0 |
| habu1_s1344_g04796.t2 | gi|704174685|ref|XP_010133099.1| | PREDICTED: probable E3 ubiquitin-protein ligase TRIM8, partial [Buceros rhinoceros silvestris] | 0.0 |
| habu1_s1344_g04796.t2 | gi|701410251|ref|XP_009998390.1| | PREDICTED: probable E3 ubiquitin-protein ligase TRIM8 [Chaetura pelagica] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 23.3 |
| Venom grand-1 | 22.0 |
| Pit, infrared sensing | 21.1 |
| Nose | 20.8 |
| Brain-1 | 13.6 |
| Eye | 15.6 |
| fetal fibroblast | 23.4 |
| venom gland-2 | 29.2 |
| Brain-2 | 11.5 |
| Spleen | 25.9 |
| Lung | 26.7 |
| Liver | 11.4 |
| Kidney | 13.5 |
| Pancreas | 12.0 |
| Small intestine | 26.7 |
| Large intestine | 27.4 |
| Stomach | 16.2 |
| heart | 16.5 |
| ovary | 44.0 |
| cheek muscle | 14.8 |
Transcript
| Transcript ID | habu1_s1344_g04796.t1 |
|---|---|
| Definition | - |
>habu1_s1344_g04796.t1 cggtctaccgagctggggagcgaatggctggcgctgactgcggctaggaggaaaaataattgaaaagggaggcttgaatt tagtcacaagggatacaaattcctttcagatattaaatggtcaaaaagtggtaaattaggaatatttaatataggaagtt tatatggcatttggacttccttctggattttgtatggagttttttcaattctcgcaatttagtggcctttctgttgcaaa agtggaaactcgtcatcatctgctttagtagaccaaaaactgactttttaaagagattaaaaggaaagttctgatctggg tgagacatggctgaaaactggaagaactgttttgaagaagagcttatatgtcctatttgtctgcatgtctttgtggaacc tgtccaacttccttgtaagcacaatttttgtaggggatgcataggagaggcttgggccaaagaatcggggctagtgcgtt gtcctgagtgtaatcaggcttacaaccagaagcccaaccttgaaaagaacttaaaattgaccaacattgtggagaaattc aactctcttaatttggaaaagactccctcagtcttacattgtgtcttctgccgccgtgggccacctttgcctgcacagaa gatctgtctaaggtgtgaagctccatgctgtcaatcccacgttcagacacacctgcaacagccctctacagcacgtgggc acctcttggtggaggcggatgacgtcagggcttggagttgcccccagcacaatgcttaccgactgtatcattgtgaagct gaacaggttgctgtttgccagttctgttgctactacagtggtgcacaccaagggcactcggtatgtgacgtggagatccg acgcaatgagattaggaagatgctggtaaagcagcaggaccgtctggaagagcgtgaacaagacattgaggagcagctgt acaagttggaatctgacaagcgcctggttgaagagaaggtgagccagctgaaggatgaggtgcgcctacagtatgagaag atgcatcagatacttgatgaggacctgcgcaaaacaatggagatccttgacaaggcccaagccaaattctgcaatgagaa tgctgcccaggtgctgcatttgagcgaacgcatgcaggaggccaagaaactgctaagctctgttcaggtcatgtatgaca agacagaagacatcaacttcatgaagaatacaaagtcggtgaagatcttgatggataggactcagaactgcacaggaggc agtctgccccctcctaagattggccacctcaattccaagctcttcctgaatgagattgccaagaaggaaaaacaattgcg gaagctcctggaaggtcccttcagtacccctgtgccattcctgcagagcatccctatgtacccctgcagcgtcagtaact caggagccgagaaacgcaagcactccacagcattcccagaagccagcttcttggagccatcctcgggacccgttgccaac cagtacgtcagccagggggcttcggctggtgaaggccagtctgcacaacccatggtgccttgtagctccacgcagcacat agtaggactccccagtggcccccaaccagttcactccagctccatgttcaatccttctcactatcccaacagcacatcat ctcagcagtctgtgctgtctcagtatggtgggcgcaaaattcttgtctgctcagtggacaactgttactgttcctccgta tctaatcacagtgggcatcagccctatccacgatccggccactttccatggacagtgtcatcacaggaatattcccaccc actcccacctgctccatctgtacctcagtcgcttccaggattggcagtgagagaatggattgatgcatctcagcaacatg gacgccaggatttctatagagtttatggtcagccttccaccaaacactatgtcaccagttaaccatctggtcttggtaaa atcctgttgatttttgaatttttttaatctagtttttgttgttttaaatcaaattcatttccatctatcccctagcacat gccagattcagagtggggcattgttgtcatctattatttctaatttaattctttaaaattcctttctttgtatcaggctg gggatgggaaactgatgggaaaaattaacaagaatttcagtcaagtatttgctttggatcatgtgacatgctactttcct gaggggaaagcttaaagggacagatgatcctttttatttcaaagtctgggctctttggttttctttttaattattttttc cttcccatttttaagacaaatttctatcattgattcattaagaaatgacacttgtagaggtttttttttaaggctgattt tttttgtgtgttaaaaggccacgtatcgtacatattggcattttttttcttctttcagagatttgtaaatacacaatggc aggaaatgaaatgcacaaaaaagggaaaagaaacttaaaaaaaattaaaaatctgttttagtttccaggagggaagtgtg tgcctaagtacacacatggcttcctgtgttttgttgatgcaacttcctctaacaagcactttgtattaaaaaaaaaggac ttcctgttataagatgcaggtatttattctgtaaccaattttagaacacacacacaaaatattcaaataaatgtgatcac ttagtgcaatgcc |
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| Transcript ID | habu1_s1344_g04796.t2 |
| Definition | - |
>habu1_s1344_g04796.t2 cggtctaccgagctggggagcgaatggctggcgctgactgcggctaggaggaaaaataattgaaaagggaggcttgaatt tagtcacaagggatacaaattcctttcagatattaaatggtcaaaaagtggtaaattaggaatatttaatataggaagtt tatatggcatttggacttccttctggattttgtatggagttttttcaattctcgcaatttagtggcctttctgttgcaaa agtggaaactcgtcatcatctgctttagtagaccaaaaactgactttttaaagagattaaaaggaaagttctgatctggg tgagacatggctgaaaactggaagaactgttttgaagaagagcttatatgtcctatttgtctgcatgtctttgtggaacc tgtccaacttccttgtaagcacaatttttgtaggggatgcataggagaggcttgggccaaagaatcggggctagtgcgtt gtcctgagtgtaatcaggcttacaaccagaagcccaaccttgaaaagaacttaaaattgaccaacattgtggagaaattc aactctcttaatttggaaaagactccctcagtcttacattgtgtcttctgccgccgtgggccacctttgcctgcacagaa gatctgtctaaggtgtgaagctccatgctgtcaatcccacgttcagacacacctgcaacagccctctacagcacgtgggc acctcttggtggaggcggatgacgtcagggcttggagttgcccccagcacaatgcttaccgactgtatcattgtgaagct gaacaggttgctgtttgccagttctgttgctactacagtggtgcacaccaagggcactcggtatgtgacgtggagatccg acgcaatgagattaggatgctttccaggaaatcttttcagaaaatgggtggaaattacacactttaaaccagagaagatg ctggtaaagcagcaggaccgtctggaagagcgtgaacaagacattgaggagcagctgtacaagttggaatctgacaagcg cctggttgaagagaaggtgagccagctgaaggatgaggtgcgcctacagtatgagaagatgcatcagatacttgatgagg acctgcgcaaaacaatggagatccttgacaaggcccaagccaaattctgcaatgagaatgctgcccaggtgctgcatttg agcgaacgcatgcaggaggccaagaaactgctaagctctgttcaggtcatgtatgacaagacagaagacatcaacttcat gaagaatacaaagtcggtgaagatcttgatggataggactcagaactgcacaggaggcagtctgccccctcctaagattg gccacctcaattccaagctcttcctgaatgagattgccaagaaggaaaaacaattgcggaagctcctggaaggtcccttc agtacccctgtgccattcctgcagagcatccctatgtacccctgcagcgtcagtaactcaggagccgagaaacgcaagca ctccacagcattcccagaagccagcttcttggagccatcctcgggacccgttgccaaccagtacgtcagccagggggctt cggctggtgaaggccagtctgcacaacccatggtgccttgtagctccacgcagcacatagtaggactccccagtggcccc caaccagttcactccagctccatgttcaatccttctcactatcccaacagcacatcatctcagcagtctgtgctgtctca gtatggtgggcgcaaaattcttgtctgctcagtggacaactgttactgttcctccgtatctaatcacagtgggcatcagc cctatccacgatccggccactttccatggacagtgtcatcacaggaatattcccacccactcccacctgctccatctgta cctcagtcgcttccaggattggcagtgagagaatggattgatgcatctcagcaacatggacgccaggatttctatagagt ttatggtcagccttccaccaaacactatgtcaccagttaaccatctggtcttggtaaaatcctgttgatttttgaatttt tttaatctagtttttgttgttttaaatcaaattcatttccatctatcccctagcacatgccagattcagagtggggcatt gttgtcatctattatttctaatttaattctttaaaattcctttctttgtatcaggctggggatgggaaactgatgggaaa aattaacaagaatttcagtcaagtatttgctttggatcatgtgacatgctactttcctgaggggaaagcttaaagggaca gatgatcctttttatttcaaagtctgggctctttggttttctttttaattattttttccttcccatttttaagacaaatt tctatcattgattcattaagaaatgacacttgtagaggtttttttttaaggctgattttttttgtgtgttaaaaggccac gtatcgtacatattggcattttttttcttctttcagagatttgtaaatacacaatggcaggaaatgaaatgcacaaaaaa gggaaaagaaacttaaaaaaaattaaaaatctgttttagtttccaggagggaagtgtgtgcctaagtacacacatggctt cctgtgttttgttgatgcaacttcctctaacaagcactttgtattaaaaaaaaaggacttcctgttataagatgcaggta tttattctgtaaccaattttagaacacacacacaaaatattcaaataaatgtgatcacttagtgcaatgcc |
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Protein
| Protein ID | habu1_s1344_g04796.t1 |
|---|---|
| Definition | - |
>habu1_s1344_g04796.t1 MAENWKNCFEEELICPICLHVFVEPVQLPCKHNFCRGCIGEAWAKESGLVRCPECNQAYNQKPNLEKNLKLTNIVEKFNS LNLEKTPSVLHCVFCRRGPPLPAQKICLRCEAPCCQSHVQTHLQQPSTARGHLLVEADDVRAWSCPQHNAYRLYHCEAEQ VAVCQFCCYYSGAHQGHSVCDVEIRRNEIRKMLVKQQDRLEEREQDIEEQLYKLESDKRLVEEKVSQLKDEVRLQYEKMH QILDEDLRKTMEILDKAQAKFCNENAAQVLHLSERMQEAKKLLSSVQVMYDKTEDINFMKNTKSVKILMDRTQNCTGGSL PPPKIGHLNSKLFLNEIAKKEKQLRKLLEGPFSTPVPFLQSIPMYPCSVSNSGAEKRKHSTAFPEASFLEPSSGPVANQY VSQGASAGEGQSAQPMVPCSSTQHIVGLPSGPQPVHSSSMFNPSHYPNSTSSQQSVLSQYGGRKILVCSVDNCYCSSVSN HSGHQPYPRSGHFPWTVSSQEYSHPLPPAPSVPQSLPGLAVREWIDASQQHGRQDFYRVYGQPSTKHYVTS |
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| Protein ID | habu1_s1344_g04796.t2 |
| Definition | - |
>habu1_s1344_g04796.t2 MTSGLGVAPSTMLTDCIIVKLNRLLFASSVATTVVHTKGTRYVTWRSDAMRLGCFPGNLFRKWVEITHFKPEKMLVKQQD RLEEREQDIEEQLYKLESDKRLVEEKVSQLKDEVRLQYEKMHQILDEDLRKTMEILDKAQAKFCNENAAQVLHLSERMQE AKKLLSSVQVMYDKTEDINFMKNTKSVKILMDRTQNCTGGSLPPPKIGHLNSKLFLNEIAKKEKQLRKLLEGPFSTPVPF LQSIPMYPCSVSNSGAEKRKHSTAFPEASFLEPSSGPVANQYVSQGASAGEGQSAQPMVPCSSTQHIVGLPSGPQPVHSS SMFNPSHYPNSTSSQQSVLSQYGGRKILVCSVDNCYCSSVSNHSGHQPYPRSGHFPWTVSSQEYSHPLPPAPSVPQSLPG LAVREWIDASQQHGRQDFYRVYGQPSTKHYVTS |
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