Gene
| Gene Model ID | habu1_s1344_g04798 |
|---|---|
| Locus | habu1_scaffold1344 : 258326 ... 289752 : + |
| To GenomeBrowser | habu1_scaffold1344:258326..289752 |
| Genes list of scaffold | habu1_scaffold1344 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| sideroflexin- partial | GO:0005743 GO:0015075 GO:0034220 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1344_g04798.t1 | 1 | 1 | Mtc | 14 | 321 | 0.0 | 438.1 | 0.0 | 0.0 | 437.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s1344_g04798.t1 | gi|602628322|ref|XP_007421098.1| | PREDICTED: sideroflexin-2 isoform X1 [Python bivittatus] | 0.0 |
| habu1_s1344_g04798.t1 | gi|637278676|ref|XP_003218527.2| | PREDICTED: sideroflexin-2 [Anolis carolinensis] | 0.0 |
| habu1_s1344_g04798.t1 | gi|543735230|ref|XP_005508588.1| | PREDICTED: sideroflexin-2 [Columba livia] | 0.0 |
| habu1_s1344_g04798.t1 | gi|591366139|ref|XP_007057929.1| | PREDICTED: sideroflexin-2 [Chelonia mydas] | 0.0 |
| habu1_s1344_g04798.t1 | gi|699648637|ref|XP_009879833.1| | PREDICTED: sideroflexin-2 isoform X2 [Charadrius vociferus] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 1.9 |
| Venom grand-1 | 1.3 |
| Pit, infrared sensing | 1.5 |
| Nose | 0.8 |
| Brain-1 | 0.7 |
| Eye | 0.9 |
| fetal fibroblast | 5.1 |
| venom gland-2 | 5.9 |
| Brain-2 | 0.5 |
| Spleen | 2.3 |
| Lung | 0.4 |
| Liver | 0.8 |
| Kidney | 8.3 |
| Pancreas | 7.6 |
| Small intestine | 0.4 |
| Large intestine | 1.0 |
| Stomach | 2.0 |
| heart | 0.4 |
| ovary | 3.3 |
| cheek muscle | 0.5 |
Transcript
| Transcript ID | habu1_s1344_g04798.t1 |
|---|---|
| Definition | - |
>habu1_s1344_g04798.t1 gcggagagattaagaaaaaaaaaaattagtgaacacccatgtgctttcaagggaaaggtgtgtgtcttgccgagtggtgc ttggcgagttacagtgaacaatggcaagtattgccaagtttaatattgatgcccctcgctgggaccagaatacttttatg gggcgtgtaaagcactttttcaacatcacagatccacggacactggcggtttcagagcaaacgttggattcggcgaaaac aattgtagagagctgcagggcaggttcggtaccccctggaaccagtgaggaacagcttttctatgccaaaaagctatatg actcagctttccatcctgactcaggggaaaaaatgaatttaatagggaggatgtcatttcaagtccctggaggaatggct atcacaggctgcatgctacaattttacagaacagttccagctgtggtgttttggcagtgggtaaatcagtcttttaacgc cattgtgaattacaccaaccggaatgcagctagccccatctcggtcaagcaaattggagtggcttatttcaccgctacca gcactgccttggcaactgccgtgggactcaacctttacactaagagagcaccgtcccttgtggcacgttgggtcccattc gcagcagtagctgctgccaactgtgtgaatatccccttgatgaggcaacaggaactcattaatgggatcacggtgacaga cgaaaatgacaatactctgggaaagtccaggagagctgcaatcaaggggataactcaggtggtggtttcccgaattgcta tggctgctcctggcatgattttgttgcctattatcatggaggcattagagaaatatccattcatgaagaaaatccaggtt ctccatgctcccttgcaaacagttcttgttggagggttccttgtgttcatggtcccagtcgcctgtgcactttttccaca gagaagttcaattgcagttttgcacctggagcctgaactcagagaacgaatcgtagctgaacatggggacaaagtgactt ttgcctattttaataagggtttatgagtgaaaactgtctggacttggtgccttatcccattatggacttcttctcctgga caaaaacctttatagggtgttgtcaggaacagagctcagaatattccagaaagagcagcactctatctcctttcttcttt tccatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgggtatagagagaaatctgggcaaatctgagtccttc tttctactacatcagcatagtgacaaatagtctgggttttggaatgtgtcattttctgctttatggcaatggtgagaatg aattacctttagtcaatgatgatgagaaatgggattactctgaagcatttattccaagccttaaatcctccttggtcctt tgtgggcacaaaatatttcctgaatcatattcctctgtgttttgaaggccatacctaagtgtctctgatccagaaaggaa actgcagctctatacttgggagcaagatctgtataactcaggagagacacttctgaaaaaaaaacatagtgctgcatttt tattcagaaattaatttttaacatcagtccatcctacttcacctgtcatcaattctactttttaattgaaccagactata ttattaaaaatgcacaattaatgcatttat |
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Protein
| Protein ID | habu1_s1344_g04798.t1 |
|---|---|
| Definition | - |
>habu1_s1344_g04798.t1 MASIAKFNIDAPRWDQNTFMGRVKHFFNITDPRTLAVSEQTLDSAKTIVESCRAGSVPPGTSEEQLFYAKKLYDSAFHPD SGEKMNLIGRMSFQVPGGMAITGCMLQFYRTVPAVVFWQWVNQSFNAIVNYTNRNAASPISVKQIGVAYFTATSTALATA VGLNLYTKRAPSLVARWVPFAAVAAANCVNIPLMRQQELINGITVTDENDNTLGKSRRAAIKGITQVVVSRIAMAAPGMI LLPIIMEALEKYPFMKKIQVLHAPLQTVLVGGFLVFMVPVACALFPQRSSIAVLHLEPELRERIVAEHGDKVTFAYFNKG L |
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