Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s1344_g04801
Locus habu1_scaffold1344 : 380856 ... 385739 : +
To GenomeBrowser habu1_scaffold1344:380856..385739
Genes list of scaffold habu1_scaffold1344

Blast Hit to nr / sp
query Subject ID Subject Name evalue
habu1_s1344_g04801.t1 gi|602628330|ref|XP_007421102.1| PREDICTED: UPF0693 protein C10orf32 homolog [Python bivittatus] 0.0
habu1_s1344_g04801.t1 gi|637278698|ref|XP_008104772.1| PREDICTED: UPF0693 protein C10orf32 homolog isoform X2 [Anolis carolinensis] 0.0
habu1_s1344_g04801.t1 gi|637278693|ref|XP_003218532.2| PREDICTED: UPF0693 protein C10orf32 homolog isoform X1 [Anolis carolinensis] 0.0
habu1_s1344_g04801.t1 gi|663250492|ref|XP_008488616.1| PREDICTED: UPF0693 protein C10orf32 homolog [Calypte anna] 0.0
habu1_s1344_g04801.t1 gi|655867708|ref|XP_008268650.1| PREDICTED: UPF0693 protein C10orf32 homolog isoform X3 [Oryctolagus cuniculus] 0.0

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 1.9
Venom grand-1 4.1
Pit, infrared sensing 1.6
Nose 3.4
Brain-1 1.8
Eye 1.2
fetal fibroblast 0.8
venom gland-2 0.8
Brain-2 1.8
Spleen 3.0
Lung 2.2
Liver 1.7
Kidney 4.4
Pancreas 6.4
Small intestine 2.6
Large intestine 2.2
Stomach 1.9
heart 2.6
ovary 5.5
cheek muscle 9.5

Transcript
Transcript IDhabu1_s1344_g04801.t1
Definition-
>habu1_s1344_g04801.t1
aactaacgccggtagctgaagtcaaacactataaattatagactaggcaactatttactgcagtatattgtgcaaaccca
aacgctgaatcaaaaggaatcacacttgctgttgagatgtatactaagtacaacagtttctttttctgcggagtagagaa
ccgactgactcagtcttttgtctttaattttggattaagtaatactggggctaacggttaatataaatattttaattttt
taaaatatacaaggtattttctgtattgtgcaggtgcggttctctcgcttcctctgcgattattaatagcgacatggcgg
taactcctgcagggatggcggtggatgttcaggcacgatttgggcattcggtgaaaggactgctgaccgagaaggtggcc
aactgcggtacggatatcatcgctctcactaaacaggtgctcaagggctcgcggagcgccgagttcctaggacaggctgc
cagaaatatggtgatgcaagagggtgccattctgcattctgaagatagtttaagaaaaatggctattataactactcacc
tacagtaccagcaagaagctattcaaaaaaagtaagtatgctgtttctatttgattgggggattatctactctagaaatc
tttattactgctttttcaaaatttgcttgcatccattttgtttgtgtagatgttttttaaattgcaaattcagtagagtt
aggattatgctgcctcttcacagagcttactcaatttgcactttgtattattaaatactaaatattaatattcagtattc
aatattattaaacactacaatgatttaatgctacattaaataccttgctttttaaaatgtga

Protein
Protein IDhabu1_s1344_g04801.t1
Definition-
>habu1_s1344_g04801.t1
MAVDVQARFGHSVKGLLTEKVANCGTDIIALTKQVLKGSRSAEFLGQAARNMVMQEGAILHSEDSLRKMAIITTHLQYQQ
EAIQKK

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Chromosome
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495