Gene
| Gene Model ID | habu1_s1344_g04802 |
|---|---|
| Locus | habu1_scaffold1344 : 398156 ... 487257 : + |
| To GenomeBrowser | habu1_scaffold1344:398156..487257 |
| Genes list of scaffold | habu1_scaffold1344 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| metal transporter cnnm2 isoform x1 | GO:0010960 GO:0015693 GO:0016323 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1344_g04802.t1 | 1 | 1 | DUF21 | 244 | 416 | 2.4e-36 | 124.7 | 9.7e-40 | 4.8e-36 | 123.7 |
| habu1_s1344_g04802.t1 | 1 | 1 | CBS | 504 | 562 | 5.1e-08 | 32.5 | 1.4e-07 | 0.00067 | 19.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s1344_g04802.t1 | gi|602628347|ref|XP_007421110.1| | PREDICTED: metal transporter CNNM2, partial [Python bivittatus] | 0.0 |
| habu1_s1344_g04802.t1 | gi|641793724|ref|XP_005303543.2| | PREDICTED: metal transporter CNNM2 [Chrysemys picta bellii] | 0.0 |
| habu1_s1344_g04802.t1 | gi|586446353|ref|XP_006831366.1| | PREDICTED: metal transporter CNNM2 isoform X1 [Chrysochloris asiatica] | 0.0 |
| habu1_s1344_g04802.t1 | gi|586446355|ref|XP_006831367.1| | PREDICTED: metal transporter CNNM2 isoform X2 [Chrysochloris asiatica] | 0.0 |
| habu1_s1344_g04802.t1 | gi|511953222|ref|XP_004794980.1| | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 1.7 |
| Venom grand-1 | 1.1 |
| Pit, infrared sensing | 1.2 |
| Nose | 1.3 |
| Brain-1 | 2.7 |
| Eye | 1.8 |
| fetal fibroblast | 10.3 |
| venom gland-2 | 1.6 |
| Brain-2 | 2.9 |
| Spleen | 0.9 |
| Lung | 1.4 |
| Liver | 0.8 |
| Kidney | 1.7 |
| Pancreas | 0.8 |
| Small intestine | 1.6 |
| Large intestine | 1.4 |
| Stomach | 1.4 |
| heart | 1.2 |
| ovary | 9.5 |
| cheek muscle | 2.9 |
Transcript
| Transcript ID | habu1_s1344_g04802.t1 |
|---|---|
| Definition | - |
>habu1_s1344_g04802.t1 cgacattaaaaaggttgagaaccactgtcctagacccattgggctcatggcagggccggggggaggcggcgaaagggaga cgcggatgctaccgcggtcgccgccgctgctgctgccgctgctgctgctgctagggattctcctcagccggtgcctggga gagcagcccgctcgcgccgccgccgctgccgcctcttcctcttcctcctcttcctcctccttgttgcccggggcatctga ttctgaggaaacggtgataatagggttacggctggaggacacggacgatgtgtcctttatggaaaagggagtgctccggg tgagcgagagaactcgtgtcaaactgcgggtctacgggcagaatatcaataacgagacctggtcccgcatcgcattcact gagcatgaacggtggagggaaggggaaggcaggcggccgccagctgagcaagaagacggcccggtccccgtgagttccgt gtcgtcggccccgcagcgttgcggcatccggacctcggatatcatcatcctcccgcatatcaccctcaaccgccgtacct cggggattatcgagatcgatatcaagccgttgcgcaaaaccgaaaaaagcaagtcctactacttgtgtacctctgtgtct tcccctgctatcctaggaggggcggggagtgtggctgggagctctggtggtggaggtggcattattggtcctgatggagg gccctggactgagacaacctggatctatcatgatggtgaggacaccaagatgattgtaggtgaggagaagaaattcttgt tacccttctggcttcaggtgatcttcatctccctcctgttgtgtctttctggcatgttcagtggtctcaacctgggactt atggctcttgatcctatggagttgcgtattgtgcagaattgtgggacggaaaaagaaaaaaactatgctaagcgcattga gcctgtgcgtcgccagggcaactacttgctctgttctttgcttttgggtaatgtattggtcaatactacccttaccatac tgctcgatgacattgcaggttctggactagtggcagtggtagtatccaccattggtattgtcatttttggtgagattgtg ccacaggctatttgttcccggcatggtctggctgtgggtgccaacaccatcttccttacgaagttctttatgatgatgac ctttccagcctcttatccagtcagcaaactgctggactgtgttttagggcaagagattggtactgtctataaccgtgaga agctacttgaaatgttaagagtcactgatccttacaatgatttggtcaaagaagaattgaatataattcaaggagcgctg gaattgcgcaccaaaactgtggaggatgtaatgactcctctccgggattgcttcatgattactgctgaagctgtacttga tttcaacactatgtctgaaatcatggagagtggatatacacgtatcccggtttttgaaggagaccgctctaatattgtgg accttctttttgtcaaagacttagcttttgtggatcctgatgattgcactccactcaagaccatcacacgtttctataac cacccactgcactttgtcttcaatgacaccaagcttgatgccatgcttgaggaattcaaaaaaggtaaatctcacttggc aattgtgcagcgggtgaataatgaaggggaaggggatcctttttatgaagtcttgggcattgttaccttggaagatgtaa ttgaagagatcatcaaatctgagattctagatgaaacagatctctacactgataacaagaccaaaaagaaagtagcccat cgggagagaaaacaggatttctctgccttcaaacagacagatagtgaaatgaaggttaaaatctcaccacaattgctttt ggcaatgcatcgtttcctagcaacagaggttgaagcatttggcccatcccaaatgtctgaaaagatcctcctgaggctac taaagcatcccaatgttattcaggagctgaagtatgatgataaaaacaagaaagcccctgaatactacctctatcagcga aacaaacctattgattacttcattctaattttacaggcagcatctcctcctctttttccccaagatctttcatacattcc attacaataaagcatgagatgaaagaaaaaggcacaatctgaaaatgaccgaagaaattgctgttgacccttttgaagaa aaggtgaaaaaattagcctgtataaaaccagggccatgtattacattcttattcagttattcaatgtattgatcatcata caatattagacatactcctaattaatattaactacttttaatgaaccattaaaataatccacttaattacataatttaag tccctgtacatgttttcaagtcatcattccccttgctaactacattggctaaggatactgagaattgtaagtaagcaata tctggaaggtaatgttatctgagttttggtttttggcatcattgaagtagagtgaaaaccaaattattctaaaaagtagt gggaacagattgaaaacaattaagcaggaaataagcttgaaaatcacactttctcccaaactaaatatttttagatcaat aaccagaagagatgacattttaatgcaatcctagtatgcatattattaatttgtggtattattttatgggtaatctgtaa tatgaattggactaatcttagttttgcctaataaactaaacaatcatgtaaactgta |
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Protein
| Protein ID | habu1_s1344_g04802.t1 |
|---|---|
| Definition | - |
>habu1_s1344_g04802.t1 MLPRSPPLLLPLLLLLGILLSRCLGEQPARAAAAAASSSSSSSSSLLPGASDSEETVIIGLRLEDTDDVSFMEKGVLRVS ERTRVKLRVYGQNINNETWSRIAFTEHERWREGEGRRPPAEQEDGPVPVSSVSSAPQRCGIRTSDIIILPHITLNRRTSG IIEIDIKPLRKTEKSKSYYLCTSVSSPAILGGAGSVAGSSGGGGGIIGPDGGPWTETTWIYHDGEDTKMIVGEEKKFLLP FWLQVIFISLLLCLSGMFSGLNLGLMALDPMELRIVQNCGTEKEKNYAKRIEPVRRQGNYLLCSLLLGNVLVNTTLTILL DDIAGSGLVAVVVSTIGIVIFGEIVPQAICSRHGLAVGANTIFLTKFFMMMTFPASYPVSKLLDCVLGQEIGTVYNREKL LEMLRVTDPYNDLVKEELNIIQGALELRTKTVEDVMTPLRDCFMITAEAVLDFNTMSEIMESGYTRIPVFEGDRSNIVDL LFVKDLAFVDPDDCTPLKTITRFYNHPLHFVFNDTKLDAMLEEFKKGKSHLAIVQRVNNEGEGDPFYEVLGIVTLEDVIE EIIKSEILDETDLYTDNKTKKKVAHRERKQDFSAFKQTDSEMKVKISPQLLLAMHRFLATEVEAFGPSQMSEKILLRLLK HPNVIQELKYDDKNKKAPEYYLYQRNKPIDYFILILQAASPPLFPQDLSYIPLQ |
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