Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s1344_g04803
Locus habu1_scaffold1344 : 488724 ... 506911 : +
To GenomeBrowser habu1_scaffold1344:488724..506911
Genes list of scaffold habu1_scaffold1344

Annotation by Blast2GO
Annotation GO
metal transporter cnnm2-like GO:0010960 GO:0015693 GO:0016323

Blast Hit to nr / sp
query Subject ID Subject Name evalue
habu1_s1344_g04803.t1 gi|586532125|ref|XP_006920960.1| PREDICTED: metal transporter CNNM2-like [Pteropus alecto] 0.0
habu1_s1344_g04803.t1 gi|700355249|ref|XP_009921940.1| PREDICTED: LOW QUALITY PROTEIN: metal transporter CNNM2-like, partial [Haliaeetus albicilla] 0.0
habu1_s1344_g04803.t1 gi|685564185|ref|XP_009213538.1| PREDICTED: metal transporter CNNM2 isoform X2 [Papio anubis] 0.0
habu1_s1344_g04803.t1 gi|7019921|dbj|BAA90926.1| unnamed protein product [Homo sapiens] 0.0

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 0.3
Venom grand-1 0.0
Pit, infrared sensing 0.3
Nose 0.1
Brain-1 0.7
Eye 0.5
fetal fibroblast 0.6
venom gland-2 0.0
Brain-2 0.6
Spleen 0.0
Lung 0.2
Liver 0.0
Kidney 0.7
Pancreas 0.0
Small intestine 0.1
Large intestine 0.2
Stomach 0.1
heart 0.3
ovary 1.1
cheek muscle 0.0

Transcript
Transcript IDhabu1_s1344_g04803.t1
Definition-
>habu1_s1344_g04803.t1
cggtcgtaagtcgaggactaaaccggttgtaagtcgaggactacccaaccggtcatatgtcgaggactttccctgcccgg
gagcgccgcgcatgcgtggttccgccccctgcgccggccgaggcgtagctggcaagcggcagagacagagcaggccgacc
accagctggccaagcccaagggagggaaaagtagaagtagaggctgggaaagaaggaatgaagtttgaagctggagcttt
ttcttactatggagtcatggctctcacagcctcaccagctgaaaataagtcaccacctcgttcttgtggcttaaatcatt
cagattctcttaatagaggagatcgcattgatgccgtgacaccagcaatagggaatagcaacaatcagttgaactcctca
tttgttcaagtatatgttccagattactcagtcagagcaatctcagacattcaatacgtcaagatctcaagacagcaata
ccaaaatgccctaatggcatctcgaatggataaaacacctcagtcctcggacagtgaaaccactaaaatagaactgactc
ttacagaactgcatgacggtttgccagatgagatggcaaatctactgaacgaacagaactgtgtaactcacaacaagtcc
aaccacagtatgcataatgaagttcttaatcagctgttcagaagttttacgaatgggtatgaaaaatgaagagttggact
ttactttctgatgagtggtctcctttcctgttcaaacttcgagattccatcatgcattaaaatgtaatgtgtaaaattaa
cat

Protein
Protein IDhabu1_s1344_g04803.t1
Definition-
>habu1_s1344_g04803.t1
MRGSAPCAGRGVAGKRQRQSRPTTSWPSPREGKVEVEAGKEGMKFEAGAFSYYGVMALTASPAENKSPPRSCGLNHSDSL
NRGDRIDAVTPAIGNSNNQLNSSFVQVYVPDYSVRAISDIQYVKISRQQYQNALMASRMDKTPQSSDSETTKIELTLTEL
HDGLPDEMANLLNEQNCVTHNKSNHSMHNEVLNQLFRSFTNGYEK

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Chromosome
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495