Gene
| Gene Model ID | habu1_s1344_g04806 |
|---|---|
| Locus | habu1_scaffold1344 : 592246 ... 614473 : - |
| To GenomeBrowser | habu1_scaffold1344:592246..614473 |
| Genes list of scaffold | habu1_scaffold1344 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| polycomb group ring finger protein 6 | GO:0008270 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1344_g04806.t2 | 1 | 1 | zf-RING_2 | 110 | 149 | 5.2e-06 | 26.1 | 8.6e-09 | 1.1e-05 | 25.1 |
| habu1_s1344_g04806.t2 | 1 | 1 | zf-C3HC4 | 111 | 149 | 1.8e-08 | 33.9 | 2.7e-11 | 3.4e-08 | 33.0 |
| habu1_s1344_g04806.t2 | 1 | 1 | zf-C3HC4_2 | 111 | 149 | 8.6e-08 | 32.0 | 1.3e-10 | 1.6e-07 | 31.1 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 1.7 |
| Venom grand-1 | 0.3 |
| Pit, infrared sensing | 1.3 |
| Nose | 1.3 |
| Brain-1 | 2.2 |
| Eye | 1.1 |
| fetal fibroblast | 2.4 |
| venom gland-2 | 0.9 |
| Brain-2 | 1.6 |
| Spleen | 2.4 |
| Lung | 1.6 |
| Liver | 1.8 |
| Kidney | 1.9 |
| Pancreas | 1.2 |
| Small intestine | 1.7 |
| Large intestine | 1.4 |
| Stomach | 2.3 |
| heart | 1.2 |
| ovary | 21.0 |
| cheek muscle | 0.3 |
Transcript
| Transcript ID | habu1_s1344_g04806.t1 |
|---|---|
| Definition | - |
>habu1_s1344_g04806.t1 ggaggagaggaggaggcgaccataacaatactccgcgattgttggaaaattgtatttccttgtgggcggaggccgagcag ctgcttgttttttggtcggagatatggcgttgactctgcaaagcgaggggtccgtgtctgaggaggctggtggactgtcc gaggaagtggaggggaaagtagcggcagcagccacgttggaaaagcctggttgctccggggcgggtgctctttacgaaca gggaagccgctctgaatccagctgtgaaggtaacgaagagatggaggatgaggaagagatgatggaggaagggactgcag gaagtggagccgcagccctcttcggaggatttgggacggaggagggcgaaatggattgcgacgatgaggacgagcgcatg attaatctttctgaactggtaccatatatcatgtgttccatctgcaagggatatttcatagatgccacaaccatcacaga atgtcttcacacattttgtaaaagctgcatagtaagacatttttactatagtaacagatgtccaaaatgcaacattgtag tacatcagacacagccgctttataatatcaggctggatcgacaattgcaagacatagtatataaattagttgtcaacttg gaagaaagagaaaaaaagagaatgcacgatttctacagggaaaggggtttagaaatacccaaacttgctgcaccccagcc aacggcagtgggcaggggaagaccccgcaaggttgtagggtctgtattccgtcttcctccagaacttgacatgtcacttc ttctggaatttattggagcaaatgatctctctgggaattttaagccactggaaaagaagtttgtgcgtgtttcaggagag gcaacaattggacatgtggaaaaattcctcagaagaaagatggatcttgatcctggctgtcaggttgacataatatgtgg tgatcacctgctagaacactatcagactctaagggaaatccaaaatgccctagggaagagtgcagtgcaggatgggttgc ttatacttcactatggactgattcttagtggagattccacattttcaaaaatctcttaaattttcagaagatgtttgaaa gaacaaaacctcatatgagaactgcagcaaaaaaaaagccatttcatttaaatgaatttaaagagatgcactgtttttgc tctgcataataattaaggaaacgatttaaagcagtgagaaaaactaacactgtaccagtaagtaagctataaatacttca gtggtcttgtattatcagcgcctagctcagggaagaacaaacatatcaacataacaaaattcattctaaatatgtaggtc ttgcagcattcatgactaatccatgggtggtgttgtatttgagactacagtttatccgaaagtctttaagtatatttgca gtactgttctcagggatgatctcttggaccacaatgtcttattgggaaaaccatgcatttattcatagggacatttgaat tttattttagttgtcagtttagaaataaaatgatgtagatttttccctacagataaaatggggctaatcactctttaaaa attgcaagcatttatatttcatgccatatgaaaaatattgaaatacataatataccaaatattagaacaggaaaagaaat aaatctatgttacctatagatcatcactggttgaataacaatgtaaatgtaaaagtagatgaggcaatgaattgggctgc attggaacatgtattccccctgttgtttatacctccaatgtcagtgggaaaataaatggaccatatgctttccaaatgtt taaaacagtatacttgttccccagataataaaagtgcacttgaataataaattg |
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| Transcript ID | habu1_s1344_g04806.t2 |
| Definition | - |
>habu1_s1344_g04806.t2 ggaggagaggaggaggcgaccataacaatactccgcgattgttggaaaattgtatttccttgtgggcggaggccgagcag ctgcttgttttttggtcggagatatggcgttgactctgcaaagcgaggggtccgtgtctgaggaggctggtggactgtcc gaggaagtggaggggaaagtagcggcagcagccacgttggaaaagcctggttgctccggggcgggtgctctttacgaaca gggaagccgctctgaatccagctgtgaaggtaacgaagagatggaggatgaggaagagatgatggaggaagggactgcag gaagtggagccgcagccctcttcggaggatttgggacggaggagggcgaaatggattgcgacgatgaggacgagcgcatg attaatctttctgaactggtaccatatatcatgtgttccatctgcaagggatatttcatagatgccacaaccatcacaga atgtcttcacacattttgtaaaagctgcatagtaagacatttttactatagtaacagatgtccaaaatgcaacattgtag tacatcagacacagccgctttataatatcaggctggatcgacaattgcaagacatagtatataaattagttgtcaacttg gaagaaagagaaaaaaagagaatgcacgatttctacagggaaaggggtttagaaatacccaaacttgctgcaccccagcc aacggcagtgggcaggggaagaccccgcaaggttgtagggtctgtattccgtcttcctccagaacttgacatgtcacttc ttctggaatttattggagcaaatgatctctctgggaattttaagtgcaagccactggaaaagaagtttgtgcgtgtttca ggagaggcaacaattggacatgtggaaaaattcctcagaagaaagatggatcttgatcctggctgtcaggttgacataat atgtggtgatcacctgctagaacactatcagactctaagggaaatccaaaatgccctagggaagagtgcagtgcaggatg ggttgcttatacttcactatggactgattcttagtggagattccacattttcaaaaatctcttaaattttcagaagatgt ttgaaagaacaaaacctcatatgagaactgcagcaaaaaaaaagccatttcatttaaatgaatttaaagagatgcactgt ttttgctctgcataataattaaggaaacgatttaaagcagtgagaaaaactaacactgtaccagtaagtaagctataaat acttcagtggtcttgtattatcagcgcctagctcagggaagaacaaacatatcaacataacaaaattcattctaaatatg taggtcttgcagcattcatgactaatccatgggtggtgttgtatttgagactacagtttatccgaaagtctttaagtata tttgcagtactgttctcagggatgatctcttggaccacaatgtcttattgggaaaaccatgcatttattcatagggacat ttgaattttattttagttgtcagtttagaaataaaatgatgtagatttttccctacagataaaatggggctaatcactct ttaaaaattgcaagcatttatatttcatgccatatgaaaaatattgaaatacataatataccaaatattagaacaggaaa agaaataaatctatgttacctatagatcatcactggttgaataacaatgtaaatgtaaaagtagatgaggcaatgaattg ggctgcattggaacatgtattccccctgttgtttatacctccaatgtcagtgggaaaataaatggaccatatgctttcca aatgtttaaaacagtatacttgttccccagataataaaagtgcacttgaataataaattg |
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Protein
| Protein ID | habu1_s1344_g04806.t1 |
|---|---|
| Definition | - |
>habu1_s1344_g04806.t1 MALTLQSEGSVSEEAGGLSEEVEGKVAAAATLEKPGCSGAGALYEQGSRSESSCEGNEEMEDEEEMMEEGTAGSGAAALF GGFGTEEGEMDCDDEDERMINLSELVPYIMCSICKGYFIDATTITECLHTFCKSCIVRHFYYSNRCPKCNIVVHQTQPLY NIRLDRQLQDIVYKLVVNLEEREKKRMHDFYRERGLEIPKLAAPQPTAVGRGRPRKVVGSVFRLPPELDMSLLLEFIGAN DLSGNFKPLEKKFVRVSGEATIGHVEKFLRRKMDLDPGCQVDIICGDHLLEHYQTLREIQNALGKSAVQDGLLILHYGLI LSGDSTFSKIS |
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| Protein ID | habu1_s1344_g04806.t2 |
| Definition | - |
>habu1_s1344_g04806.t2 MALTLQSEGSVSEEAGGLSEEVEGKVAAAATLEKPGCSGAGALYEQGSRSESSCEGNEEMEDEEEMMEEGTAGSGAAALF GGFGTEEGEMDCDDEDERMINLSELVPYIMCSICKGYFIDATTITECLHTFCKSCIVRHFYYSNRCPKCNIVVHQTQPLY NIRLDRQLQDIVYKLVVNLEEREKKRMHDFYRERGLEIPKLAAPQPTAVGRGRPRKVVGSVFRLPPELDMSLLLEFIGAN DLSGNFKCKPLEKKFVRVSGEATIGHVEKFLRRKMDLDPGCQVDIICGDHLLEHYQTLREIQNALGKSAVQDGLLILHYG LILSGDSTFSKIS |
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