Gene
| Gene Model ID | habu1_s1344_g04807 |
|---|---|
| Locus | habu1_scaffold1344 : 615954 ... 630227 : + |
| To GenomeBrowser | habu1_scaffold1344:615954..630227 |
| Genes list of scaffold | habu1_scaffold1344 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| transcription initiation factor tfiid subunit 5 | EC:2.3.1.48 GO:0003700 GO:0004402 GO:0005669 GO:0006355 GO:0006367 GO:0015629 GO:0016573 GO:0033276 GO:0042967 GO:0044212 GO:0045449 GO:0046983 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1344_g04807.t1 | 1 | 1 | TFIID_90kDa | 203 | 338 | 1.60028e-42 | 144.9 | 1.4013e-45 | 3.09967e-42 | 144.0 |
| habu1_s1344_g04807.t1 | 5 | 1 | WD40 | 537 | 572 | 0.0 | 223.1 | 9.0e-16 | 2.7e-12 | 46.0 |
| habu1_s1344_g04807.t1 | 5 | 2 | WD40 | 577 | 613 | 0.0 | 223.1 | 9.9e-10 | 2.9e-06 | 26.9 |
| habu1_s1344_g04807.t1 | 5 | 3 | WD40 | 619 | 656 | 0.0 | 223.1 | 1.7e-16 | 5.1e-13 | 48.3 |
| habu1_s1344_g04807.t1 | 1 | 1 | Nup160 | 634 | 665 | 7.6e-08 | 30.9 | 5.6e-06 | 0.017 | 13.3 |
| habu1_s1344_g04807.t1 | 5 | 4 | WD40 | 660 | 698 | 0.0 | 223.1 | 1.3e-15 | 3.7e-12 | 45.6 |
| habu1_s1344_g04807.t1 | 5 | 5 | WD40 | 705 | 740 | 0.0 | 223.1 | 3.7e-15 | 1.1e-11 | 44.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s1344_g04807.t1 | gi|602632831|ref|XP_007423302.1| | PREDICTED: transcription initiation factor TFIID subunit 5 [Python bivittatus] | 0.0 |
| habu1_s1344_g04807.t1 | gi|224052753|ref|XP_002197117.1| | 0.0 | |
| habu1_s1344_g04807.t1 | gi|71895077|ref|NP_001026406.1| | transcription initiation factor TFIID subunit 5 [Gallus gallus] | 0.0 |
| habu1_s1344_g04807.t1 | gi|543351677|ref|XP_005520763.1| | PREDICTED: transcription initiation factor TFIID subunit 5 [Pseudopodoces humilis] | 0.0 |
| habu1_s1344_g04807.t1 | gi|542144258|ref|XP_005481188.1| | PREDICTED: transcription initiation factor TFIID subunit 5 [Zonotrichia albicollis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 2.3 |
| Venom grand-1 | 2.5 |
| Pit, infrared sensing | 2.6 |
| Nose | 3.1 |
| Brain-1 | 1.7 |
| Eye | 2.4 |
| fetal fibroblast | 10.1 |
| venom gland-2 | 2.5 |
| Brain-2 | 1.6 |
| Spleen | 2.1 |
| Lung | 2.3 |
| Liver | 1.3 |
| Kidney | 1.9 |
| Pancreas | 0.7 |
| Small intestine | 2.1 |
| Large intestine | 1.4 |
| Stomach | 1.6 |
| heart | 1.6 |
| ovary | 3.0 |
| cheek muscle | 1.2 |
Transcript
| Transcript ID | habu1_s1344_g04807.t1 |
|---|---|
| Definition | - |
>habu1_s1344_g04807.t1 aaaaggggaggtgaagccgttgggcgcgctaacatggctgctttgccggaggagccgacggaggcagtaccggtaaagcc agatcctgatgcaggagcgccgcccgctccgccagctcctctctcccagtccccgatctcgacggcaacagcagttgcaa caactgcccctcctccgcctgcctcctcggtcgctgccacccttctcgcggatggggagccgcttgcgggaggagttgac tcgaagagctcggtgacttccagccctacgccggcagcctctcaactacccgccgaccggcagactctgcaggcggtgct gcagttcttgcggcgcagcaatctgcgcgaatcggaggagatcctccgaagggaagcccgtggcctcatcgacgacctct tgagcgacccgaattcctcagcgcccggggtccccggagctcatggaggggaaggacaggatctcagtgtcgggatcgtg gctcctggagctggggacgtgctaatcaattctatcacatttggccagactggagctacgatctctccagccgctctcac gacacctcctgcagcgcccttgggtcctcctgccaaagccggagttcttgtagaagatcagccagatgtgagtgcagtgc tatctgcttataatcaacagggagacccagcactttatgaagaatactacagtggattgaaacacttcattgaacgtgct ctggattgtcatcgagctgaattatcacaacttttttatcctctgtttgtacacatgtacttggaactagtctacaatgg acatgaaaatgaagcaaaatcgttctttgaaaagtttcatggggatcaagaatgttattaccaagatgacttgcgtgtat tatcaagtttaaccaaaaaagagcatatgaggggcaatgagactatgctggatttccgaacaagcaagtttgtgttgcgt atttcccgtgactcttaccagcttctgaagagacatcttcaggaaaaacagaacaatcagatatggaacattgttcaaga acatctttatattgatatttttgatggaatgcctcgtagtaaacaacagattgatgctatggtgggaagtttagctggag aagcaaaacgagaagcaaataaagcaaaggtattttttggcttattaaaagaaccagaaattgagttacctttggatgat gaagatgaagaaggagagaatgaagagggcaagccaaagaaaaagaagccaaaaaaagataatatgggatcaaaaagtaa aaagcaggatccaaatgctcctcctcagaatagaattcctcttcctgagctaaaggattctgataagctagataaaataa tgaatatgaaggaagctactaaacgtgttcggcttggtccagattgtttgccatctatttgcttctacacatttcttaat gcataccagggtcttacagctgtggatgttacagatgactctagcatgatcgttggaggctttgctgattccaccgtcag ggtatggtctgtgacacccaaaaagcttcgcagtgtaaaattagccacagatctcagtgtcatagataaagaatctgatg atgttttagaaagaatcatggatgaaaaaacagcaagtgaattgaagattttatacggtcatagtggacctgtctatggt gctagctttagtcctgataggaactatttgctgtcatcttcagaggatggcaccatcagattgtggagtcttctaacttt ttcttgtttggtgggatacaaaggacataattatcctgtatgggacacacagttctctccgtatggatattactttgtat cttgtggccacgacagagtgtctcgtttgtgggctacagatcactatcagcctttgcggatctttgctggtcatttggca gatgtcacatgtacacgttttcacccaaactccaactacattgccacaggctcagcagacagaactgtgaggctttggga tgtacttaatggaaactgtgtaagaatcttcacaggacataagggaccagttcattcattagcattttctcctaatggac gattcttggcaagtggagcaactgatggaagagtgcttctgtgggatattggccatggtttaatggtaggagagctaaaa ggacactcagacacaatttatgcactcaaattcagtagagatggagagatcttagcttcaggttcaatggacaacacagt taaactttgggatgctgtgaaagcttttgaggacttggagacagatgattttacaacagccactggacacataaaccttc ctgaaagttcacaggatatgctgctgggcacatatatgaccaaatcaactccagttatacacctccactttactcgaaga aatttacttcttgctgctggggcttatagttctcagtaaaacacaaaagtagatggcttgattatgcaagtcttgtaaag tatgtttagatcttcacattccggaatattaccattaatatattgtataaatgaactgaaattc |
|
Protein
| Protein ID | habu1_s1344_g04807.t1 |
|---|---|
| Definition | - |
>habu1_s1344_g04807.t1 MAALPEEPTEAVPVKPDPDAGAPPAPPAPLSQSPISTATAVATTAPPPPASSVAATLLADGEPLAGGVDSKSSVTSSPTP AASQLPADRQTLQAVLQFLRRSNLRESEEILRREARGLIDDLLSDPNSSAPGVPGAHGGEGQDLSVGIVAPGAGDVLINS ITFGQTGATISPAALTTPPAAPLGPPAKAGVLVEDQPDVSAVLSAYNQQGDPALYEEYYSGLKHFIERALDCHRAELSQL FYPLFVHMYLELVYNGHENEAKSFFEKFHGDQECYYQDDLRVLSSLTKKEHMRGNETMLDFRTSKFVLRISRDSYQLLKR HLQEKQNNQIWNIVQEHLYIDIFDGMPRSKQQIDAMVGSLAGEAKREANKAKVFFGLLKEPEIELPLDDEDEEGENEEGK PKKKKPKKDNMGSKSKKQDPNAPPQNRIPLPELKDSDKLDKIMNMKEATKRVRLGPDCLPSICFYTFLNAYQGLTAVDVT DDSSMIVGGFADSTVRVWSVTPKKLRSVKLATDLSVIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLL SSSEDGTIRLWSLLTFSCLVGYKGHNYPVWDTQFSPYGYYFVSCGHDRVSRLWATDHYQPLRIFAGHLADVTCTRFHPNS NYIATGSADRTVRLWDVLNGNCVRIFTGHKGPVHSLAFSPNGRFLASGATDGRVLLWDIGHGLMVGELKGHSDTIYALKF SRDGEILASGSMDNTVKLWDAVKAFEDLETDDFTTATGHINLPESSQDMLLGTYMTKSTPVIHLHFTRRNLLLAAGAYSS Q |
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