Gene
| Gene Model ID | habu1_s13450_g21098 |
|---|---|
| Locus | habu1_scaffold13450 : 192746 ... 197309 : + |
| To GenomeBrowser | habu1_scaffold13450:192746..197309 |
| Genes list of scaffold | habu1_scaffold13450 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| class e basic helix-loop-helix protein 40 | GO:0000122 GO:0001078 GO:0001102 GO:0001191 GO:0003705 GO:0003714 GO:0005667 GO:0005730 GO:0005794 GO:0016481 GO:0019904 GO:0032922 GO:0042803 GO:0043153 GO:0043426 GO:0043433 GO:0046982 GO:0070888 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s13450_g21098.t1 | 1 | 1 | HLH | 30 | 77 | 1.6e-11 | 43.6 | 1.0e-14 | 5.0e-11 | 42.1 |
| habu1_s13450_g21098.t1 | 1 | 1 | Hairy_orange | 111 | 147 | 1.1e-09 | 37.8 | 6.4e-13 | 3.2e-09 | 36.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s13450_g21098.t1 | gi|602649005|ref|XP_007430914.1| | PREDICTED: class E basic helix-loop-helix protein 40 [Python bivittatus] | 0.0 |
| habu1_s13450_g21098.t1 | gi|327266079|ref|XP_003217834.1| | PREDICTED: class E basic helix-loop-helix protein 40 isoform X2 [Anolis carolinensis] | 0.0 |
| habu1_s13450_g21098.t1 | gi|637272412|ref|XP_008103541.1| | PREDICTED: class E basic helix-loop-helix protein 40 isoform X1 [Anolis carolinensis] | 0.0 |
| habu1_s13450_g21098.t1 | gi|543740914|ref|XP_005511338.1| | PREDICTED: LOW QUALITY PROTEIN: class E basic helix-loop-helix protein 40 [Columba livia] | 0.0 |
| habu1_s13450_g21098.t1 | gi|729722125|ref|XP_010568689.1| | PREDICTED: class E basic helix-loop-helix protein 40 [Haliaeetus leucocephalus] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 35.0 |
| Venom grand-1 | 24.3 |
| Pit, infrared sensing | 26.4 |
| Nose | 31.1 |
| Brain-1 | 34.8 |
| Eye | 35.1 |
| fetal fibroblast | 18.0 |
| venom gland-2 | 18.2 |
| Brain-2 | 19.6 |
| Spleen | 13.8 |
| Lung | 21.5 |
| Liver | 38.1 |
| Kidney | 20.2 |
| Pancreas | 17.2 |
| Small intestine | 15.3 |
| Large intestine | 31.2 |
| Stomach | 26.6 |
| heart | 34.9 |
| ovary | 12.7 |
| cheek muscle | 47.0 |
Transcript
| Transcript ID | habu1_s13450_g21098.t1 |
|---|---|
| Definition | - |
>habu1_s13450_g21098.t1 agcccgtgtggaggctcctggggcgggaggcgatcccgggtctctcattggcttcgcctggagtggaagggctgttccgg ccggccaggtgccaagcaagtcttcggagaagccgaaagcccatggaaaggatcaccagcgctcagcctcctcctcccgc ttgtctgggcaagctggctgcgctcgacggcggggacatgtccgggctgattgagaagaaaaggcgtgataggattaatg aatgcattgcccagttgaaagatcttttaccagaacatctcaaacttacaactttaggacacttagaaaaagctgttgtt cttgaacttaccttgaagcatgtcaaagcattaaccagtctcattgaacagcagcagcagcagatcatagctctccaaaa aggtttacatgctgatgagctgccaccacggagtcttgaatctagccaagagatatttcggtctggcttccagatgtgtg ccaaagaagtgttacaatacctggccaagcaggaaaatgccaaggatctgaaatcatctcagttcatgagccacctgcac agaatggcagaagctctgcagagtggaatcagccgaaagcctgtagacgccaccccaaagcttgcagatctgaaggataa atctccatctctgaccaaagctactgaggcacatgggaaaaactgtgtgcctgtgattcagaggacttttgcccactcta gtggagagcagagtggtagtgacacagacacagacagtggatatgggggtgagctagaaaaaagtgactctaaatctgat ccacagtattttaaaaaggacacggagctgaagtacactgcccaagagagaatcccttctattaaacaagaaaatgagga tccaccagcaaaacggaccaggatggacatgtcagaggatgaagaccattttaataataatgtgcttggttcttcctcca acagcttcttaggtccccaccagtctcccctttgtttgcctttttatgttttccctccctcggcgacagcctacctgcct atgttggagaagtgttggtatccggcctctatgcctatcttgtatccaagcctcccaacgtccactgcagcactttcagg gttgatgaacccagagagaatgtcttctcctttgctattgcctcaccgactcccttcgcctataccgtcccattccccca tggactctacggctcttcttcaagctttgaagcagatgtctcctttggatctggaaaccaaagactaaacaaggagaggc tctcttgttctgtttggctgagtttgaaattattttggatttctccccattctaaaccgtgtgtgtaggaggctacgtgc ccaagtcctagaaaagttttcaaagacgcatcccagttagcgaaaaagaggagagaggtgtgtgtgtgattgttacatta aaataatgtttggatatgctttta |
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Protein
| Protein ID | habu1_s13450_g21098.t1 |
|---|---|
| Definition | - |
>habu1_s13450_g21098.t1 MERITSAQPPPPACLGKLAALDGGDMSGLIEKKRRDRINECIAQLKDLLPEHLKLTTLGHLEKAVVLELTLKHVKALTSL IEQQQQQIIALQKGLHADELPPRSLESSQEIFRSGFQMCAKEVLQYLAKQENAKDLKSSQFMSHLHRMAEALQSGISRKP VDATPKLADLKDKSPSLTKATEAHGKNCVPVIQRTFAHSSGEQSGSDTDTDSGYGGELEKSDSKSDPQYFKKDTELKYTA QERIPSIKQENEDPPAKRTRMDMSEDEDHFNNNVLGSSSNSFLGPHQSPLCLPFYVFPPSATAYLPMLEKCWYPASMPIL YPSLPTSTAALSGLMNPERMSSPLLLPHRLPSPIPSHSPMDSTALLQALKQMSPLDLETKD |
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