Gene
| Gene Model ID | habu1_s13450_g21100 |
|---|---|
| Locus | habu1_scaffold13450 : 288646 ... 321778 : + |
| To GenomeBrowser | habu1_scaffold13450:288646..321778 |
| Genes list of scaffold | habu1_scaffold13450 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| adp-ribosylation factor-like protein 8b | GO:0005525 GO:0005765 GO:0007059 GO:0007067 GO:0007264 GO:0019003 GO:0030496 GO:0031902 GO:0043014 GO:0045298 GO:0048487 GO:0051233 GO:0051301 GO:0070062 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s13450_g21100.t2 | 1 | 1 | Arf | 3 | 174 | 1.10002e-41 | 141.9 | 8.40779e-45 | 1.29998e-41 | 141.7 |
| habu1_s13450_g21100.t2 | 1 | 1 | Ras | 3 | 174 | 1.6e-18 | 66.6 | 1.2e-21 | 1.9e-18 | 66.3 |
| habu1_s13450_g21100.t2 | 1 | 1 | Gtr1_RagA | 3 | 130 | 3.4e-10 | 39.4 | 2.4e-13 | 3.9e-10 | 39.2 |
| habu1_s13450_g21100.t2 | 1 | 1 | Miro | 4 | 113 | 6.6e-11 | 42.7 | 7.6e-14 | 1.2e-10 | 41.8 |
| habu1_s13450_g21100.t2 | 1 | 1 | SRPRB | 4 | 123 | 2.5e-08 | 33.3 | 2.0e-11 | 3.4e-08 | 32.9 |
| habu1_s13450_g21100.t2 | 1 | 1 | G-alpha | 30 | 79 | 3.8e-06 | 25.8 | 1.9e-08 | 3.2e-05 | 22.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s13450_g21100.t2 | gi|617553311|ref|XP_007530005.1| | PREDICTED: ADP-ribosylation factor-like protein 8B [Erinaceus europaeus] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 17.2 |
| Venom grand-1 | 14.7 |
| Pit, infrared sensing | 15.3 |
| Nose | 15.8 |
| Brain-1 | 19.9 |
| Eye | 12.4 |
| fetal fibroblast | 27.9 |
| venom gland-2 | 24.8 |
| Brain-2 | 29.0 |
| Spleen | 7.8 |
| Lung | 9.0 |
| Liver | 13.8 |
| Kidney | 16.3 |
| Pancreas | 14.3 |
| Small intestine | 7.1 |
| Large intestine | 10.5 |
| Stomach | 15.5 |
| heart | 26.6 |
| ovary | 63.9 |
| cheek muscle | 50.0 |
Transcript
| Transcript ID | habu1_s13450_g21100.t1 |
|---|---|
| Definition | - |
>habu1_s13450_g21100.t1 gcggacgcagggagagacggagaggcgggtagagaggcggctgggctgctgtcactgccaccatgctggccttgttgtct cggctgctggattggttccggtcgctcttctggaaggaagagatggagctgacgctggtcgggctgcagtactcgggcaa gaccaccttcgtcaacgtcatcgcgtcaggccagttcagtgaagacatgattcctacagtgggctttaacatgcggaaag ttaccaagggtaatgtcacaataaagatttgggatataggaggacagccacgattccgaagtatgtgggaacgctactgc agaggagttaatgctattgtctatatggtagatgctgcggatcgtgaaaaaatagaagcttctagaaatgagttgcacaa tcttctagacaaaccacagctacaaggaattcctgttctagtacttggaaacaaaagagaccttactaatgcactggatg agaagcagcttattgaaaaaatgaacctggctgctattcaagacagagaaatctgctgctactccatttcttgcaaagaa aaggacaatatagatatcacacttcagtggcttattcagcactcaaagtctcgaagaagctgaaaatgttcacctagctg ctcatttggccatattctcaattgtctactccctccgtgatgaattgttatccaggatagtcgtcctgtgtccaaggaat tgccttttttcacagttcatgcctccatatgcactgctgaatgacttataatcctacttctgtcaaagagttggctagag ttgtcataagtcgtgcaaatgttttttattcatttcatctagacagtggcagtgggtacctcttnnnnnnnnnnnnnccc ccccccccggtcttcctgatccagatttttatattagattttctgcacaattatttcattcttgtatgtagctgctcatt ggaaatgctggcacgtggcagcacagggattaggtcagctcttattataaagcttttccaacactgtttaaatgggatac tgtactaatttttcctcccagatgcatgtgatgtatattgtaaaaaggtttcaaaggaaagtgcgaagcactagaattaa atcactaaattatcataaattct |
|
| Transcript ID | habu1_s13450_g21100.t2 |
| Definition | - |
>habu1_s13450_g21100.t2 gcggacgcagggagagacggagaggcgggtagagaggcggctgggctgctgtcactgccaccatgctggccttgttgtct cggctgctggattggttccggtcgctcttctggaaggaagagatggagctgacgctggtcgggctgcagtactcgggcaa gaccaccttcgtcaacgtcatcgcgtcaggccagttcagtgaagacatgattcctacagtgggctttaacatgcggaaag ttaccaagggtaatgtcacaataaagatttgggatataggaggacagccacgattccgaagtatgtgggaacgctactgc agaggagttaatgctattgtctatatggtagatgctgcggatcgtgaaaaaatagaagcttctagaaatgagttgcacaa tcttctagacaaaccacagctacaaggaattcctgttctagtacttggaaacaaaagagaccttactaatgcactggatg agaagcagcttattgaaaaaatccatacaagggcctttggaatattgtctatcagtggtaaatatgggaacctggctgct attcaagacagagaaatctgctgctactccatttcttgcaaagaaaaggacaatatagatatcacacttcagtggcttat tcagcactcaaagtctcgaagaagctgaaaatgttcacctagctgctcatttggccatattctcaattgtctactccctc cgtgatgaattgttatccaggatagtcgtcctgtgtccaaggaattgccttttttcacagttcatgcctccatatgcact gctgaatgacttataatcctacttctgtcaaagagttggctagagttgtcataagtcgtgcaaatgttttttattcattt catctagacagtggcagtgggtacctcttnnnnnnnnnnnnncccccccccccggtcttcctgatccagatttttatatt agattttctgcacaattatttcattcttgtatgtagctgctcattggaaatgctggcacgtggcagcacagggattaggt cagctcttattataaagcttttccaacactgtttaaatgggatactgtactaatttttcctcccagatgcatgtgatgta tattgtaaaaaggtttcaaaggaaagtgcgaagcactagaattaaatcactaaattatcataaattct |
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Protein
| Protein ID | habu1_s13450_g21100.t1 |
|---|---|
| Definition | - |
>habu1_s13450_g21100.t1 MELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVGFNMRKVTKGNVTIKIWDIGGQPRFRSMWERYCRGVNAIVYMVDAAD REKIEASRNELHNLLDKPQLQGIPVLVLGNKRDLTNALDEKQLIEKMNLAAIQDREICCYSISCKEKDNIDITLQWLIQH SKSRRS |
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| Protein ID | habu1_s13450_g21100.t2 |
| Definition | - |
>habu1_s13450_g21100.t2 MELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVGFNMRKVTKGNVTIKIWDIGGQPRFRSMWERYCRGVNAIVYMVDAAD REKIEASRNELHNLLDKPQLQGIPVLVLGNKRDLTNALDEKQLIEKIHTRAFGILSISGKYGNLAAIQDREICCYSISCK EKDNIDITLQWLIQHSKSRRS |
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