Gene
| Gene Model ID | habu1_s1408_g05029 |
|---|---|
| Locus | habu1_scaffold1408 : 480532 ... 525205 : - |
| To GenomeBrowser | habu1_scaffold1408:480532..525205 |
| Genes list of scaffold | habu1_scaffold1408 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| barh-like 2 homeobox protein | GO:0003677 GO:0006355 GO:0044424 GO:0048699 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1408_g05029.t1 | 1 | 1 | Homeobox | 256 | 307 | 1.4e-19 | 69.4 | 4.1e-23 | 3.1e-19 | 68.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s1408_g05029.t1 | gi|602647345|ref|XP_007430099.1| | PREDICTED: barH-like 2 homeobox protein-like [Python bivittatus] | 0.0 |
| habu1_s1408_g05029.t1 | gi|557277651|ref|XP_006021916.1| | PREDICTED: barH-like 2 homeobox protein [Alligator sinensis] | 0.0 |
| habu1_s1408_g05029.t1 | gi|149410630|ref|XP_001507472.1| | PREDICTED: barH-like 2 homeobox protein [Ornithorhynchus anatinus] | 0.0 |
| habu1_s1408_g05029.t1 | gi|564236474|ref|XP_006275141.1| | PREDICTED: barH-like 2 homeobox protein [Alligator mississippiensis] | 0.0 |
| habu1_s1408_g05029.t1 | gi|558226484|ref|XP_006137362.1| | PREDICTED: barH-like 2 homeobox protein [Pelodiscus sinensis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.0 |
| Venom grand-1 | 0.0 |
| Pit, infrared sensing | 0.0 |
| Nose | 0.0 |
| Brain-1 | 0.3 |
| Eye | 1.6 |
| fetal fibroblast | 0.0 |
| venom gland-2 | 0.0 |
| Brain-2 | 0.6 |
| Spleen | 0.0 |
| Lung | 0.0 |
| Liver | 0.0 |
| Kidney | 0.0 |
| Pancreas | 0.0 |
| Small intestine | 0.0 |
| Large intestine | 0.0 |
| Stomach | 0.0 |
| heart | 0.0 |
| ovary | 0.1 |
| cheek muscle | 0.1 |
Transcript
| Transcript ID | habu1_s1408_g05029.t1 |
|---|---|
| Definition | - |
>habu1_s1408_g05029.t1 tgaactccgcagtccttaatgcggggttgattggagcaggctgaggagttgtggttttgagggaggacaggagacataga agtaaaagaagacaacaaaatgtaactttgtagctttggtcttggccagtgtgtgtttgtctggggtgccctgttggatc ctaaagcctctcttggctatgtctatatccaaatgtagctgggctgttgttattgggtgctggcatggcagtttcctcct cctcctcnnnnnnnntgcccaggcagcccagcagcgccaatggcggccacgccctctgcctgcgccccgcagcatcaacg ggggaggcgagactggggcaacagcatgtgtgcccacagagggggctccgagtgccgcctctggcacccgtgccataggt ttgccaccactgctctagagtacggaaggtccggcagcccggtgatgatgaacggggactttcggacggcccacggcgag gccagggcggcggattttctcaaccgggccaccccgtccccttgttcggaaatagacacggtgggcacggctccctcctc gcctatctcggtcaccgcggagcaccccgagcagcatctggcgcaagatggcctgtcgccacagcatcaccatcttcacc acggccaacatccggaacagcagcagccaaaaagtttgcagccgtcgccccagcaacagcagcagcagcagcagcagcaa cagcagcaattgggttcctgtagctctggccccaggacttccacttcttcttttttaattaaggacattttgggagatag caagccgctggccgcctgcgccccttacagcaccagcgtctcctcgccccatcccgtccccaaaccggagagcaacgcgg ccagcgaaagtttcaggccaaaactggagcaggacgacagcagaaccaaactggacaaacgcgacgatacccagaatgag ctgaaatgccacggggcaaaagaagaaggggatcgcgagatttccagcagcagggatagcccccctgtgagagcaaagaa gcctcgcaaggcgcggactgccttctccgaccaccagctcaaccaactggagaggagcttcgagaggcagaagtacctca gtgtccaagaccgcatggacttggcagccgccctcaatctgactgacacccaggtcaaaacctggtaccaaaaccggaga ttcattataacatattataatgagatgaagaataaccagtaacagcatatttggttcaacgtttttttctataagggtca cattgctattatattggaaaagcgaaaattaacatttccacgggatgactttagtttctaaatagcctttcaacctaagg agattaaattggagagttccatgtaagtaagatttctttggaggaagagcacattataaataagattaataaaataacaa tagatctgattacat |
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Protein
| Protein ID | habu1_s1408_g05029.t1 |
|---|---|
| Definition | - |
>habu1_s1408_g05029.t1 MAATPSACAPQHQRGRRDWGNSMCAHRGGSECRLWHPCHRFATTALEYGRSGSPVMMNGDFRTAHGEARAADFLNRATPS PCSEIDTVGTAPSSPISVTAEHPEQHLAQDGLSPQHHHLHHGQHPEQQQPKSLQPSPQQQQQQQQQQQQQLGSCSSGPRT STSSFLIKDILGDSKPLAACAPYSTSVSSPHPVPKPESNAASESFRPKLEQDDSRTKLDKRDDTQNELKCHGAKEEGDRE ISSSRDSPPVRAKKPRKARTAFSDHQLNQLERSFERQKYLSVQDRMDLAAALNLTDTQVKTWYQNRRFIITYYNEMKNNQ |
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