Gene
| Gene Model ID | habu1_s1408_g05032 |
|---|---|
| Locus | habu1_scaffold1408 : 737309 ... 775615 : - |
| To GenomeBrowser | habu1_scaffold1408:737309..775615 |
| Genes list of scaffold | habu1_scaffold1408 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| probable atp-dependent dna helicase hfm1 | GO:0003676 GO:0004386 GO:0005524 GO:0008152 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1408_g05032.t1 | 1 | 1 | Sec63 | 139 | 262 | 3.4e-11 | 42.9 | 1.0e-13 | 1.5e-09 | 37.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s1408_g05032.t1 | gi|602677102|ref|XP_007444004.1| | PREDICTED: probable ATP-dependent DNA helicase HFM1-like, partial [Python bivittatus] | 0.0 |
| habu1_s1408_g05032.t1 | gi|637293100|ref|XP_008107468.1| | PREDICTED: probable ATP-dependent DNA helicase HFM1 [Anolis carolinensis] | 0.0 |
| habu1_s1408_g05032.t1 | gi|591348546|ref|XP_007068826.1| | PREDICTED: probable ATP-dependent DNA helicase HFM1-like [Chelonia mydas] | 0.0 |
| habu1_s1408_g05032.t1 | gi|564236480|ref|XP_006275144.1| | PREDICTED: probable ATP-dependent DNA helicase HFM1 [Alligator mississippiensis] | 0.0 |
| habu1_s1408_g05032.t1 | gi|557277560|ref|XP_006021872.1| | PREDICTED: probable ATP-dependent DNA helicase HFM1 [Alligator sinensis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.0 |
| Venom grand-1 | 0.0 |
| Pit, infrared sensing | 0.0 |
| Nose | 0.0 |
| Brain-1 | 0.0 |
| Eye | 0.0 |
| fetal fibroblast | 0.0 |
| venom gland-2 | 0.0 |
| Brain-2 | 0.0 |
| Spleen | 0.1 |
| Lung | 0.0 |
| Liver | 0.1 |
| Kidney | 0.0 |
| Pancreas | 0.0 |
| Small intestine | 0.1 |
| Large intestine | 0.1 |
| Stomach | 0.0 |
| heart | 0.0 |
| ovary | 0.0 |
| cheek muscle | 0.0 |
Transcript
| Transcript ID | habu1_s1408_g05032.t1 |
|---|---|
| Definition | - |
>habu1_s1408_g05032.t1 ataagtcgaggactaaaccggtcgtaagtccaggactaaaccggtcgtaagtccaggactacccaaccggttgtaagtcg aggacttttcctgcccgggagtgccgcgcatgcgtggttccaccccctgcgccagccgaggcgtagctggcaagcggcag agacggagcaggccgaccaccagctggcccagctcaagggagtttgatacaacagcaacagcagttatcatgacaaggct aagtacaagagacaagtatgttcatatgttaaatggtgcagatacaatagaaagcagtttgcacaaacatctaattgagc acttaaatgctgaaatagtgcttcacaccatcactgatgtgaacatagctttagaatgggtgagatcaactttcctctat atcagagctttgaagaatccagcttattatgaaactggacgacagatggcttggtattatattgcatttgatactgtaaa aaagtgtttcatgattaatggaacagtaactttatctgaactgattttgaacagacatcctccttttggaaatcaaatta aagaatcagtagtacatcttccaaaatatgaacttaacatagagcagctggtaaagtacaacgaagcagtagctgaaatc atagtgacaatcatattaaccaactttgaacagctgcagataaaaagaactgctccagattctcattatgcaaccctagt aataggagataatgataataatgtgatttttagacaaaggattatggattctgctttgctgaaaactggaaactggacaa aaaagattgaagtgagaagagctgttaattctgatgagcttaatataaatctaatcagttctgaatatgttggactggat attcagcagaaatataaaccattttacttagggccaaagaaggttggaattatgatcacttgtggaaaacctgatagctc tcaaacttcttcggtagggtcatcaaaattaagaacaaataaaggtaaaattggagtttcagagaaatcaaacatgaaga atgagtcagttttttcttcatatcttactgacttaagaaaccggaatgctgaatctgccattcccccagtcaagcgacta aagatgcagatgtcaaataaatctcaaaaagttgatcttaaacaatttagttatattccaaaagcttttcttccagcatt gccaagatttggatgtaaaagaaatggagttgatgttaaatcttataacggctgcaagattgctaattgctcagcattgg aaaatgaaagattagagcatgtacaacatccaagatcccctttagcagaagacatctacagttctgatgtttctcaaaga tttcaactggaacctgaagttcacaaaatgaatggtttctttgctatcaagcagtctgaggaaaacaataacccgacaat gagctcaaacaaaagtcttgaagaatcttcaatgagcaacttgactgatgcagataaaagcatctctttgttttctgaaa ctttgaatataaattttgaattaggaaatgaaatttggaatgattatgatgatgggagttttgtacatggcaaccctttt actgctaatatgcagaagttaaaagatccagaatcttctccgctggaatccagaaacatgtgcatgcagaatttgagaaa aaactcatcattttgccaaaatactcagaataaacctcctggggtaccttttaaaagttattccatagataacacaaaac ctgatatctacctgcaaaattcttactctccctcactgactcctccatccagtagcaaattatttacagactgtggaaat caaaatatttttagacttcaagaagaatataatccaccagaaaatctgaaaatggcacaattaactgcaatctcagaaac agcctcgagatcttaccaaattgatggaaagggagacttttttattaccagcagaaatatgacaaagggggctgatctta ggcaacagcttgaggacgatggtgatattaagccttttcttggcatatttgatggccttttctaatgctcataaacacaa tattttatcagtggagaagcataaatcttaattttgaggatgagaattttctactttttcggtttataataattcattga tagtcaattttgctatatggataataccataattaccaaaacactatatatttaattattcatatacttaatttgtaata ttatttaaatgtcaaaatgtttcattagataagattgtattcaaaatatactatttttgaattttgaattttacagtttt attctggaaaataatattatctttgctaaatgtatctcttaaataaatatctttgtgaactacttttta |
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Protein
| Protein ID | habu1_s1408_g05032.t1 |
|---|---|
| Definition | - |
>habu1_s1408_g05032.t1 MRGSTPCASRGVAGKRQRRSRPTTSWPSSREFDTTATAVIMTRLSTRDKYVHMLNGADTIESSLHKHLIEHLNAEIVLHT ITDVNIALEWVRSTFLYIRALKNPAYYETGRQMAWYYIAFDTVKKCFMINGTVTLSELILNRHPPFGNQIKESVVHLPKY ELNIEQLVKYNEAVAEIIVTIILTNFEQLQIKRTAPDSHYATLVIGDNDNNVIFRQRIMDSALLKTGNWTKKIEVRRAVN SDELNINLISSEYVGLDIQQKYKPFYLGPKKVGIMITCGKPDSSQTSSVGSSKLRTNKGKIGVSEKSNMKNESVFSSYLT DLRNRNAESAIPPVKRLKMQMSNKSQKVDLKQFSYIPKAFLPALPRFGCKRNGVDVKSYNGCKIANCSALENERLEHVQH PRSPLAEDIYSSDVSQRFQLEPEVHKMNGFFAIKQSEENNNPTMSSNKSLEESSMSNLTDADKSISLFSETLNINFELGN EIWNDYDDGSFVHGNPFTANMQKLKDPESSPLESRNMCMQNLRKNSSFCQNTQNKPPGVPFKSYSIDNTKPDIYLQNSYS PSLTPPSSSKLFTDCGNQNIFRLQEEYNPPENLKMAQLTAISETASRSYQIDGKGDFFITSRNMTKGADLRQQLEDDGDI KPFLGIFDGLF |
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